More than 300 homologs were found in PanDaTox collection
for query gene Gobs_2225 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013061  Phep_1164  Methylmalonyl-CoA mutase  54.87 
 
 		 1131 aa  1232    Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0237  putative methylmalonyl-CoA mutase protein  67.9 
 
 		 1099 aa  1459    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.556775 
 
 
-
 
NC_013595  Sros_3556  Methylmalonyl-CoA mutase  73.19 
 
 		 1073 aa  1511    Streptosporangium roseum DSM 43021  Bacteria  normal  0.0534628  normal  0.668167 
 
 
-
 
NC_007298  Daro_0243  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  67.5 
 
 		 1116 aa  1479    Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_24570  methylmalonyl-CoA mutase family protein  74.86 
 
 		 1079 aa  1558    Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.990884 
 
 
-
 
NC_010524  Lcho_3844  methylmalonyl-CoA mutase, large subunit  67.53 
 
 		 1096 aa  1454    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007333  Tfu_2811  methylmalonyl-CoA mutase, N-terminal  74.17 
 
 		 1080 aa  1582    Thermobifida fusca YX  Bacteria  normal  0.153738  n/a   
 
 
-
 
NC_007347  Reut_A0253  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  68.49 
 
 		 1093 aa  1466    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1893  methylmalonyl-CoA mutase-like  50.88 
 
 		 1139 aa  1072    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1722  methylmalonyl-CoA mutase-like  60.74 
 
 		 1082 aa  1262    Geobacter metallireducens GS-15  Bacteria  normal  0.181913  normal  0.685956 
 
 
-
 
NC_009675  Anae109_3169  methylmalonyl-CoA mutase, large subunit  67.22 
 
 		 1097 aa  1411    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3652  methylmalonyl-CoA mutase  75.64 
 
 		 1105 aa  1631    Frankia sp. CcI3  Bacteria  normal  0.587052  normal  1 
 
 
-
 
NC_012793  GWCH70_3339  methylmalonyl-CoA mutase, large subunit  58.9 
 
 		 1085 aa  1291    Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0089  methylmalonyl-CoA mutase, large subunit  68.59 
 
 		 1095 aa  1455    Ralstonia pickettii 12J  Bacteria  normal  0.571974  normal  1 
 
 
-
 
NC_007908  Rfer_3612  methylmalonyl-CoA mutase  67.24 
 
 		 1113 aa  1469    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1068  Methylmalonyl-CoA mutase  54.52 
 
 		 1108 aa  1198    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_4054  methylmalonyl-CoA mutase  65.47 
 
 		 1139 aa  1418    Polaromonas sp. JS666  Bacteria  normal  0.632309  normal  0.527832 
 
 
-
 
NC_007951  Bxe_A4277  methylmalonyl-CoA mutase  74.53 
 
 		 1272 aa  901    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.0862944 
 
 
-
 
NC_007973  Rmet_0210  methylmalonyl-CoA mutase  68.28 
 
 		 1093 aa  1481    Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_2277  methylmalonyl-CoA mutase, large subunit  74.5 
 
 		 1092 aa  1535    Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_1029  methylmalonyl-CoA mutase, large subunit  73.84 
 
 		 1081 aa  1569    Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_2256  Methylmalonyl-CoA mutase  55.51 
 
 		 1110 aa  1190    Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.642899 
 
 
-
 
NC_009921  Franean1_1077  methylmalonyl-CoA mutase, large subunit  75 
 
 		 1133 aa  1614    Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.953537 
 
 
-
 
NC_014230  CA2559_06870  methylmalonyl-CoA mutase  53.85 
 
 		 1139 aa  1222    Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_0923  Methylmalonyl-CoA mutase  57.01 
 
 		 1150 aa  1238    Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_0431  methylmalonyl-CoA mutase, large subunit  74.36 
 
 		 1298 aa  904    Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_2188  methylmalonyl-CoA mutase, large subunit  60.55 
 
 		 1086 aa  1286    Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00063386  n/a   
 
 
-
 
NC_011146  Gbem_2838  methylmalonyl-CoA mutase, large subunit  60.33 
 
 		 1082 aa  1272    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2332  methylmalonyl-CoA mutase  52.16 
 
 		 1146 aa  1185    Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_0156  methylmalonyl-CoA mutase, large subunit  64.66 
 
 		 1127 aa  1390    Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.308187 
 
 
-
 
NC_012856  Rpic12D_0095  methylmalonyl-CoA mutase, large subunit  68.59 
 
 		 1095 aa  1469    Ralstonia pickettii 12D  Bacteria  normal  0.778156  normal  0.758233 
 
 
-
 
NC_008699  Noca_4143  methylmalonyl-CoA mutase, large subunit  72.85 
 
 		 1043 aa  1471    Nocardioides sp. JS614  Bacteria  normal  0.578246  n/a   
 
 
-
 
NC_014165  Tbis_1618  methylmalonyl-CoA mutase large subunit  77.04 
 
 		 1083 aa  1666    Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_3371  methylmalonyl-CoA mutase, large subunit  67.07 
 
 		 1088 aa  1466    Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3524  methylmalonyl-CoA mutase, large subunit  67.87 
 
 		 1097 aa  1457    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1375  methylmalonyl-CoA mutase, large subunit  60.24 
 
 		 1082 aa  1269    Geobacter sp. M21  Bacteria  n/a    normal  0.0491198 
 
 
-
 
NC_008825  Mpe_A0903  methylmalonyl-CoA mutase  68.21 
 
 		 1096 aa  1465    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_2225  methylmalonyl-CoA mutase, large subunit  100 
 
 		 1077 aa  2182    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.552157  n/a   
 
 
-
 
NC_009483  Gura_1342  methylmalonyl-CoA mutase, large subunit  61.28 
 
 		 1115 aa  1290    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2289  Methylmalonyl-CoA mutase  57.85 
 
 		 1144 aa  1168    Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0243844 
 
 
-
 
NC_013411  GYMC61_3448  methylmalonyl-CoA mutase, large subunit  58.67 
 
 		 1086 aa  1288    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  39.47 
 
 		 570 aa  334  7.000000000000001e-90  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  40.53 
 
 		 560 aa  330  8e-89  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  39.33 
 
 		 557 aa  328  5e-88  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  40.72 
 
 		 563 aa  327  6e-88  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  38.76 
 
 		 551 aa  322  1.9999999999999998e-86  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  40.39 
 
 		 564 aa  322  3e-86  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal  1 
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  39.59 
 
 		 551 aa  320  7e-86  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  39.75 
 
 		 550 aa  316  9.999999999999999e-85  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  38.83 
 
 		 567 aa  314  4.999999999999999e-84  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  38.75 
 
 		 566 aa  314  4.999999999999999e-84  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000166 
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  39.25 
 
 		 550 aa  314  6.999999999999999e-84  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  40.14 
 
 		 543 aa  313  9e-84  Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal  1 
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  36.9 
 
 		 559 aa  313  1e-83  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  40.85 
 
 		 551 aa  309  2.0000000000000002e-82  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  38.6 
 
 		 531 aa  308  3e-82  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  39.47 
 
 		 551 aa  308  3e-82  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  38.38 
 
 		 521 aa  307  8.000000000000001e-82  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  36.52 
 
 		 559 aa  306  1.0000000000000001e-81  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  37.52 
 
 		 551 aa  306  2.0000000000000002e-81  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  37.77 
 
 		 552 aa  305  4.0000000000000003e-81  Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  39.03 
 
 		 565 aa  304  6.000000000000001e-81  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  38.19 
 
 		 558 aa  303  8.000000000000001e-81  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  38.05 
 
 		 552 aa  303  1e-80  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  39.67 
 
 		 588 aa  303  1e-80  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  39.96 
 
 		 588 aa  303  1e-80  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  39.02 
 
 		 529 aa  301  3e-80  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  39.78 
 
 		 588 aa  301  5e-80  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  36.63 
 
 		 566 aa  300  7e-80  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  39.7 
 
 		 549 aa  299  2e-79  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  35.97 
 
 		 559 aa  298  3e-79  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_013947  Snas_1393  methylmalonyl-CoA mutase large subunit  36.32 
 
 		 578 aa  298  5e-79  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  38.19 
 
 		 566 aa  297  6e-79  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  39.33 
 
 		 549 aa  297  6e-79  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  37.83 
 
 		 569 aa  297  7e-79  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  39.14 
 
 		 549 aa  296  1e-78  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  37.99 
 
 		 563 aa  296  1e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  34.52 
 
 		 553 aa  296  2e-78  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  38.46 
 
 		 555 aa  296  2e-78  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  38.97 
 
 		 537 aa  296  2e-78  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  36.54 
 
 		 532 aa  296  2e-78  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  37.43 
 
 		 713 aa  294  5e-78  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  38.17 
 
 		 527 aa  294  6e-78  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  35.58 
 
 		 554 aa  293  8e-78  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  37.23 
 
 		 562 aa  293  9e-78  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  37.57 
 
 		 545 aa  293  1e-77  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  39.31 
 
 		 548 aa  293  1e-77  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.473507 
 
 
-
 
NC_013124  Afer_1791  methylmalonyl-CoA mutase, large subunit  39.21 
 
 		 556 aa  293  2e-77  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0908947  n/a   
 
 
-
 
NC_013744  Htur_3831  methylmalonyl-CoA mutase, large subunit  36.94 
 
 		 566 aa  292  2e-77  Haloterrigena turkmenica DSM 5511  Archaea  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1909  methylmalonyl-CoA mutase, large subunit  36.17 
 
 		 560 aa  292  3e-77  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.699759  normal  0.051216 
 
 
-
 
NC_009380  Strop_0832  methylmalonyl-CoA mutase, large subunit  37.4 
 
 		 547 aa  291  6e-77  Salinispora tropica CNB-440  Bacteria  normal  0.682429  normal  0.0142114 
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  35.35 
 
 		 559 aa  290  8e-77  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  37.17 
 
 		 562 aa  290  8e-77  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  38.58 
 
 		 518 aa  290  9e-77  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.380206 
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  36.56 
 
 		 559 aa  288  2.9999999999999996e-76  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  36.43 
 
 		 542 aa  288  4e-76  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  37.4 
 
 		 527 aa  288  5e-76  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  36.98 
 
 		 549 aa  288  5e-76  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  37.5 
 
 		 566 aa  288  5.999999999999999e-76  Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  34.89 
 
 		 559 aa  287  8e-76  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
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