More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_2481 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  61 
 
 		 551 aa  657    Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  58.1 
 
 		 570 aa  652    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  57.69 
 
 		 552 aa  664    Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  58.61 
 
 		 551 aa  671    Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  58.32 
 
 		 554 aa  668    Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  59.11 
 
 		 559 aa  678    Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  61.04 
 
 		 564 aa  674    Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal  1 
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  62.48 
 
 		 563 aa  704    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  57.88 
 
 		 552 aa  661    Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  56.67 
 
 		 551 aa  662    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  58.47 
 
 		 559 aa  673    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  58.75 
 
 		 588 aa  663    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  58.93 
 
 		 588 aa  665    Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  62.48 
 
 		 557 aa  711    Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  56.81 
 
 		 559 aa  637    Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  61.2 
 
 		 551 aa  671    Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  58 
 
 		 559 aa  652    Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_013216  Dtox_1909  methylmalonyl-CoA mutase, large subunit  57.64 
 
 		 560 aa  658    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.699759  normal  0.051216 
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  63.36 
 
 		 531 aa  693    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  100 
 
 		 565 aa  1164    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  56.32 
 
 		 550 aa  656    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_008554  Sfum_0458  methylmalonyl-CoA mutase, large subunit  55.33 
 
 		 559 aa  651    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.484451  normal  0.420898 
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  55.66 
 
 		 551 aa  640    Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  60.79 
 
 		 559 aa  702    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  58.24 
 
 		 549 aa  659    Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  61.78 
 
 		 545 aa  705    Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  62.32 
 
 		 550 aa  702    Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  60.59 
 
 		 560 aa  695    Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  59.12 
 
 		 588 aa  667    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_1768  methylmalonyl-CoA mutase, large subunit  57.64 
 
 		 560 aa  651    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0288235  n/a   
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  58.51 
 
 		 543 aa  643    Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal  1 
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  57.74 
 
 		 521 aa  632  1e-180  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  54.81 
 
 		 559 aa  630  1e-179  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  58.06 
 
 		 549 aa  625  1e-178  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  58.06 
 
 		 549 aa  625  1e-178  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  55.23 
 
 		 558 aa  627  1e-178  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_009675  Anae109_1988  methylmalonyl-CoA mutase, large subunit  56.64 
 
 		 588 aa  624  1e-177  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  57.88 
 
 		 549 aa  621  1e-176  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  54.98 
 
 		 542 aa  621  1e-176  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_008009  Acid345_1454  methylmalonyl-CoA mutase  54.86 
 
 		 599 aa  618  1e-176  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  57.99 
 
 		 548 aa  618  1e-176  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.473507 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  55.74 
 
 		 555 aa  619  1e-176  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  57.25 
 
 		 566 aa  619  1e-176  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000166 
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  55.8 
 
 		 566 aa  617  1e-175  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013743  Htur_1992  methylmalonyl-CoA mutase, large subunit  56.95 
 
 		 560 aa  617  1e-175  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  58.48 
 
 		 529 aa  615  9.999999999999999e-175  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  55.52 
 
 		 566 aa  612  9.999999999999999e-175  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  55.41 
 
 		 560 aa  610  1e-173  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  55.52 
 
 		 566 aa  610  1e-173  Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  54.78 
 
 		 553 aa  607  9.999999999999999e-173  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  54.5 
 
 		 560 aa  607  9.999999999999999e-173  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  56.73 
 
 		 537 aa  607  9.999999999999999e-173  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  54.96 
 
 		 569 aa  605  9.999999999999999e-173  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  54 
 
 		 562 aa  603  1.0000000000000001e-171  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.000975641 
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  57.2 
 
 		 518 aa  602  1.0000000000000001e-171  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.380206 
 
 
-
 
NC_013595  Sros_1703  Methylmalonyl-CoA mutase  54.3 
 
 		 555 aa  598  1e-170  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.236995 
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  53.72 
 
 		 562 aa  598  1e-170  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  53.1 
 
 		 562 aa  600  1e-170  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  53.71 
 
 		 563 aa  600  1e-170  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  53.96 
 
 		 567 aa  597  1e-169  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009440  Msed_0638  methylmalonyl-CoA mutase  54.13 
 
 		 553 aa  598  1e-169  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  0.187219 
 
 
-
 
NC_014210  Ndas_0363  methylmalonyl-CoA mutase, large subunit  52.96 
 
 		 575 aa  593  1e-168  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  54.95 
 
 		 527 aa  592  1e-168  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
NC_013744  Htur_3831  methylmalonyl-CoA mutase, large subunit  55.6 
 
 		 566 aa  592  1e-168  Haloterrigena turkmenica DSM 5511  Archaea  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1393  methylmalonyl-CoA mutase large subunit  51.24 
 
 		 578 aa  588  1e-167  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_0832  methylmalonyl-CoA mutase, large subunit  54 
 
 		 547 aa  591  1e-167  Salinispora tropica CNB-440  Bacteria  normal  0.682429  normal  0.0142114 
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  54.6 
 
 		 527 aa  585  1e-166  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
NC_013235  Namu_3099  methylmalonyl-CoA mutase, large subunit  51.87 
 
 		 567 aa  585  1e-166  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000000149706  hitchhiker  0.00000336315 
 
 
-
 
NC_013124  Afer_0726  methylmalonyl-CoA mutase, large subunit  53.74 
 
 		 526 aa  585  1e-166  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  54.76 
 
 		 526 aa  583  1.0000000000000001e-165  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  53.76 
 
 		 517 aa  581  1.0000000000000001e-165  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.593051 
 
 
-
 
NC_013124  Afer_1791  methylmalonyl-CoA mutase, large subunit  54.45 
 
 		 556 aa  579  1e-164  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0908947  n/a   
 
 
-
 
NC_013739  Cwoe_5523  methylmalonyl-CoA mutase, large subunit  52.87 
 
 		 537 aa  576  1.0000000000000001e-163  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_4552  methylmalonyl-CoA mutase, large subunit  54.89 
 
 		 521 aa  573  1.0000000000000001e-162  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_3607  methylmalonyl-CoA mutase, large subunit  54.89 
 
 		 515 aa  568  1e-160  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  50.55 
 
 		 562 aa  558  1e-158  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal  1 
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  49.72 
 
 		 532 aa  557  1e-157  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_008826  Mpe_B0541  methylmalonyl-CoA mutase  49.73 
 
 		 562 aa  556  1e-157  Methylibium petroleiphilum PM1  Bacteria  normal  0.46948  hitchhiker  0.00133344 
 
 
-
 
NC_009621  Smed_5086  methylmalonyl-CoA mutase, large subunit  48.78 
 
 		 545 aa  544  1e-153  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3657  methylmalonyl-CoA mutase, large subunit  49.45 
 
 		 563 aa  543  1e-153  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.748454  normal  0.0699604 
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  51.01 
 
 		 718 aa  531  1e-149  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0321557 
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  48.43 
 
 		 706 aa  525  1e-148  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_009921  Franean1_4310  methylmalonyl-CoA mutase, large subunit  50 
 
 		 525 aa  523  1e-147  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.57946 
 
 
-
 
NC_013595  Sros_3188  Methylmalonyl-CoA mutase  49.91 
 
 		 725 aa  521  1e-146  Streptosporangium roseum DSM 43021  Bacteria  normal  0.36577  normal  0.670701 
 
 
-
 
NC_014165  Tbis_1920  methylmalonyl-CoA mutase large subunit  49.81 
 
 		 720 aa  518  1e-146  Thermobispora bispora DSM 43833  Bacteria  normal  0.0552222  normal  0.617547 
 
 
-
 
NC_004310  BR1190  methylmalonyl-CoA mutase  49.28 
 
 		 712 aa  518  1.0000000000000001e-145  Brucella suis 1330  Bacteria  normal  0.942727  n/a   
 
 
-
 
NC_009667  Oant_2001  methylmalonyl-CoA mutase  49.28 
 
 		 714 aa  518  1.0000000000000001e-145  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0856  methylmalonyl-CoA mutase  47.04 
 
 		 714 aa  516  1.0000000000000001e-145  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_3021  methylmalonyl-CoA mutase  50.67 
 
 		 718 aa  516  1.0000000000000001e-145  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.954275 
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  48.61 
 
 		 716 aa  511  1e-144  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17991 
 
 
-
 
NC_009338  Mflv_2387  methylmalonyl-CoA mutase, large subunit  49.05 
 
 		 557 aa  514  1e-144  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.415653  normal  1 
 
 
-
 
NC_007406  Nwi_2238  methylmalonyl-CoA mutase  49.53 
 
 		 722 aa  509  1e-143  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1349  methylmalonyl-CoA mutase  49.11 
 
 		 733 aa  509  1e-143  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0148615  unclonable  0.0000000469192 
 
 
-
 
NC_007964  Nham_2638  methylmalonyl-CoA mutase  49.9 
 
 		 720 aa  510  1e-143  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_05680  methylmalonyl-CoA mutase  47.87 
 
 		 726 aa  506  9.999999999999999e-143  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_2505  methylmalonyl-CoA mutase, large subunit  47.4 
 
 		 736 aa  508  9.999999999999999e-143  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000422516  n/a   
 
 
-
 
NC_008726  Mvan_4261  methylmalonyl-CoA mutase, large subunit  49.43 
 
 		 529 aa  506  9.999999999999999e-143  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.440573 
 
 
-
 
NC_011988  Avi_5687  methylmalonyl-CoA mutase  50.57 
 
 		 712 aa  504  1e-141  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  46.97 
 
 		 713 aa  503  1e-141  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_3812  methylmalonyl-CoA mutase  48.47 
 
 		 548 aa  503  1e-141  Mycobacterium sp. JLS  Bacteria  normal  0.887759  normal  0.207369 
 
 
-
 
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