| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1791 |
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| Symbol | |
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| ID | 8323884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1876348 |
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| End bp | 1878018 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952921 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_003110378 |
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| Protein GI | 256372554 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0908947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGATC TGTCGGCTTG GTCGGAGGCG TATCGTCGAG CCGGAACGCG CGAGGAGGCC
TTCGAGACGC TCTCGGGGGT GCCCCTCGCT CCCCTCTACG GGCGCCACGG CGCGCTCGAC
CCGGACGACG CGGGAGCCAT GGTCGATCCC GACGAGGAGC TGCCTGGTCA GTATCCGTAC
ACTCGAGGCG TCTACGCCTC GGGCTACCGA ACGAAGCGCT GGACGATGCG CATGTTCGCG
GGCTTCTCGA CGGCCATCGA GACCAACCAG CGCTTCCACG AGCTGCTCGC CAACGGGGGC
ACCGGGCTCT CGGTCGCGTT CGACTTGCCG ACGCTCATGG GACGCGACTC CGATGACCCT
CGGTCGGTGG GCGAGGTGGG CAAGTGCGGG GTCGCCATCG ACACGCTCGA GGACATGCGG
GACCTGTTTA GCGGGATCGA CCTCGGTGCG GTCACCACGT CGATGACCAT CAACGCGCCA
GCGGCGTTCA TCCTCGCCAG TTTCATCGCG GTGGCGGAGG AGCGTGGCGT CGCACGAGAG
CGCCTTGCGG GCACGCTCCA GAACGACATT CTGAAGGAGT ATCAGGCGCA GAAGGAGTAC
TACTTCCCGC CTCGTCCATC GGCTCGACTG GTGCGTGACA CCATCGCGTT CACCGCGGCC
GAGATGCCGA AGTGGCATCC CATCTCCGTC TCGGGTTATC ACATCCGCGA GGCCGGCTCG
ACCGCGGCCG AGGAACTCGC CTTCACGCTG GCCAACGGCT TCGCCTACGT CGAGCTCGGC
CAGGCAGCCG GCCTCGACGT CGATGCGTTC GCGCCGCAGC TGTCATTCTT CTTCAATGCC
CACATCGATT TCTTTGAAGA GATCGCGAAG TACCGCGCCG CACGGCGCCT CTGGGCCCGT
TGGTTGAGGG AGCGCTACGG GGCGCGCGAT CCACGTTCGT GGCAGTTGCG CTTCCACACG
CAGACCGCCG GCGTGTCGCT GACCGCCCAG CAGCCAGAGA TCAACGTGGT CCGGACTGCG
CTCGAGGCGC TCGCAGGCGT GCTGGGCGGC ACGCAGAGCC TGCACACCAA CTCCATGGAC
GAGGTGCTCT CGCTGCCCAC CGACCGTGCG GCTCGCATCG CGCTGCGCAC GCAACAGGTG
ATCGCCTACG AGACGGGTGT GGCGAACGTC GTCGATCCTT TGGGCGGCTC CTACCTCGTC
GAGGCGCTCA CCGACGAGCT CGAAGCACGA GCCTCGGCGA TCTTCGCCGA GATCGAGCGC
CTCGGTGGGG GGTCCATGCT CGAGGGGGCC TTCGTCGGGA TCGACGACGG TTACTACCAG
GGCCGCATCG CAGACTCTGC CTACGAGCTC GAGAAGCGCA TCAGCGCCGG AGAGCGGGTG
ATCGTCGGTG TGAACGCCTT CACCGCCGGC AACGAGGAGG ACGAGATCCC GACGCTCGTG
ATCGGGCCCG AGGTCGAAGC GCGTCAGATC GAACGACTCA GGAGGGTGCG GCGTCAGCGT
GACGAGGAGG CCCAGCGGAC TGCGATCCGA CGCCTCGTCG ACGAGGCGCG CGATCCAGAG
CGCAACCTCA TGCCCGCTCT CATCGATGCC GCTCGCGCGA GAGCGAGCGT CGGCGAGGTG
ATGATGGCGC TCGGCGAGGT GTTCGGCCTC TACGAAGAGC CGCCTCGGTG A
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| Protein sequence | MGDLSAWSEA YRRAGTREEA FETLSGVPLA PLYGRHGALD PDDAGAMVDP DEELPGQYPY
TRGVYASGYR TKRWTMRMFA GFSTAIETNQ RFHELLANGG TGLSVAFDLP TLMGRDSDDP
RSVGEVGKCG VAIDTLEDMR DLFSGIDLGA VTTSMTINAP AAFILASFIA VAEERGVARE
RLAGTLQNDI LKEYQAQKEY YFPPRPSARL VRDTIAFTAA EMPKWHPISV SGYHIREAGS
TAAEELAFTL ANGFAYVELG QAAGLDVDAF APQLSFFFNA HIDFFEEIAK YRAARRLWAR
WLRERYGARD PRSWQLRFHT QTAGVSLTAQ QPEINVVRTA LEALAGVLGG TQSLHTNSMD
EVLSLPTDRA ARIALRTQQV IAYETGVANV VDPLGGSYLV EALTDELEAR ASAIFAEIER
LGGGSMLEGA FVGIDDGYYQ GRIADSAYEL EKRISAGERV IVGVNAFTAG NEEDEIPTLV
IGPEVEARQI ERLRRVRRQR DEEAQRTAIR RLVDEARDPE RNLMPALIDA ARARASVGEV
MMALGEVFGL YEEPPR
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