| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4326 |
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| Symbol | |
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| ID | 5541839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5575146 |
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| End bp | 5576837 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896432 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001434368 |
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| Protein GI | 156744239 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.273661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGG AGACGACGAT GTCCGATTCG CTCGCTGCCT TCCGCAAAGC CTACGAAGAG
TGGGAGCGCA CCGTGCTGCA CCCAACGCTC GAGCGCACAC CCGAACGCGA CGCTGACTTT
ACAACGGTCT CAGGGGCGCC GGTCAACCGC CTCTACACCC CTCTCGACCT GGAAGGAACC
GATCCGCTGC ACGACATTGG ACTGCCGGGC GCCTATCCGT TCACCCGTGG CATTCACCCG
ACCGGGTATC GCGGCAAACT CTGGACGATG CGCATGTTTG CCGGATTCGG CAGCGCCGAG
GAAACCAACG CACGCTTCCG CTATTTGCTC GACCAGGGAC AAACCGGTCT CTCGATTGCA
TTCGATATGC CGACGCTCTA CGGGCGCGAC ACCGATGATC CGCTGGTGCC TGGCGAGTTT
GGCAAGTGTG GCGTAGCCGT CTCTTCGCTT GCCGACATGG AGATCCTGCT CGATGGGCTG
CCGCTCGACG AGATCAGCAC ATCGATGACG ATCAATTCAC CGGCTGCGAT CATCTGGGCG
ATGTATCTGG TCGTGGCGGA GAAACGCGGC ATTTCCTGGG ACAAACTGCG CGGCACGCTC
CAGAACGACA TCCTGAAGGA ATACATTGCC CAGAACGAGT ATATCTTCCC ACCAGAGCCA
TCGATGCGCC TGGTGGTGGA CACTATCGAG TTTTCGACGC GCTACGTGCC GCAGTGGAAC
CCGGTGTCGA TCAGCGGTTA CCATATCCGC GAAGCGGGCG CAACCGCCGC TCAGGAACTG
GCGTTCACCC TCGCCGACGG TCTCGCATAT GTGCAGGCAG CCATTGAACG CGGTCTGCAT
GTCGATGAAT TTGCGCCACG GCTCAGTTTC TTCTTCAACG CGCACAACGA CTTGTTTGAG
GAAGTGGCGA AGTACCGCGC AGCGCGGCGT ATCTGGGCGC GCACATTGCG CGAACGATTT
GGCGCGCAGA ACCCGCGTTC GCTCTGGCTA CGCTTCCATG CGCAGACGGC GGGATGTTCG
CTCACGGCGC AGCAACCGGA GAATAATATC GTGCGCACGG CCATCCAGGC GCTTGCCGCT
ATCCTTGGCG GTTGCCAGTC GCTCCACACG AATTCGATGG ATGAAGCATT GGCGCTGCCT
TCCGAAAAAG CCGTCACTAT TGCGCTGCGC ACCCAGCAGA TCATCGCCGA GGAGAGCGGC
GTCGCCAATA CGGTCGATCC ACTCGGCGGC TCGTATTTCG TCGAGACGTT GACCAACCGC
ATGGAAGCGG AGTGTCTTGC CTATTTCCGC CGCATCGAGG AACTCGGCGG CGTCATCCCC
GCCATCCGTC GCGGTTTCTT CCAGGCGGAA ATTGCCGATG CCGCCTACCG CTATCAGTGT
GAGATCGACT CTGGACGGCG CGGTATTATC GGCGTCAATC GATATGCGGT GAAAACGCCG
CTCGAAATCC CGATCCTCGA AATGGATCCG CATGGCGAGG CGCGTCACCT GGAGCGCCTG
AATCGCGTGC GCGCAACCCG CGACAATGCG CGCGTGCACC AATGCCTGGC AGCGCTGCGC
GAAGCGGCGA TGGGGCAGGA GAACCTGATG CCGCCGATCC TCGATTGTGT GCGCGCGTAT
GCCACCATTG GCGAAATGTG CGACGTGCTG CGCGATGTGT TTGGCGTCTA CCGTGAAATG
GTCGTGGTGT GA
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| Protein sequence | MKEETTMSDS LAAFRKAYEE WERTVLHPTL ERTPERDADF TTVSGAPVNR LYTPLDLEGT
DPLHDIGLPG AYPFTRGIHP TGYRGKLWTM RMFAGFGSAE ETNARFRYLL DQGQTGLSIA
FDMPTLYGRD TDDPLVPGEF GKCGVAVSSL ADMEILLDGL PLDEISTSMT INSPAAIIWA
MYLVVAEKRG ISWDKLRGTL QNDILKEYIA QNEYIFPPEP SMRLVVDTIE FSTRYVPQWN
PVSISGYHIR EAGATAAQEL AFTLADGLAY VQAAIERGLH VDEFAPRLSF FFNAHNDLFE
EVAKYRAARR IWARTLRERF GAQNPRSLWL RFHAQTAGCS LTAQQPENNI VRTAIQALAA
ILGGCQSLHT NSMDEALALP SEKAVTIALR TQQIIAEESG VANTVDPLGG SYFVETLTNR
MEAECLAYFR RIEELGGVIP AIRRGFFQAE IADAAYRYQC EIDSGRRGII GVNRYAVKTP
LEIPILEMDP HGEARHLERL NRVRATRDNA RVHQCLAALR EAAMGQENLM PPILDCVRAY
ATIGEMCDVL RDVFGVYREM VVV
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