| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1834 |
|---|
| Symbol | |
|---|
| ID | 3888162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 2095568 |
|---|
| End bp | 2097334 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637863371 |
|---|
| Product | methylmalonyl-CoA mutase |
|---|
| Protein accession | YP_465043 |
|---|
| Protein GI | 86158258 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
|---|
| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.243116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTCGA AGCCGGCGAA GGACCAGACG CGGCGGGTGG AGAAGCGGGG CGACACGCCG
AAGGCGCCGG ACCGCGCCGA GCGGCCGCTG TACGGGCGCG ACGAGATCGC GCGGGTGCTC
GAGGCCCGGG ACCGCTGGAC GCAGGACGAG CTGGCGGAGG CGCTGGCGCG GCTGCCGCGG
CGCAAGGCGG CCTTCCAGAC CGACTCGGGC ATCCCCATCC CCGACGTGAT CGACCCGGCC
CACCTGCCGG AGCACGACTT CCTGCGCGAC GTGGGCTACC CGGGCGCCTA CCCGTTCACC
CGGGGTCCGC AGCCGACCAT GTACCGGGGC CGGCTCTGGA CCATGCGCCA GTTCGCGGGC
TTCGGCACGC CCGCCGACAC GAACCAGCGC TTCAAGTACC TGCTCGCCCA CGGCGTGAAC
GGGCTCTCCA CCGCCTTCGA CATGCCGGCG CTCATGGGCT ACGACGCCGA CCACCCGATG
AGCCGCGGCG AGGTGGGCAA GGAGGGCGTC GCCATCTCCA CGCTGGAGGA CTTCGAGATC
CTGTTCGACG GGATCCCGCT CGGCGACGTG ACCACCTCCA TGACCATCAA CGCGACCGCG
GTCATCGCGC TCGCGATGTA CGTCGCGGTG GCGGAGAAGC AGGGCGTGCC GCGCGCGAAG
CTGGGCGGCA CGCTCCAGGC GGACATGCTG AAGGAGTACA TCGCGCAGAA GGAGTGGATG
ATCCCGCCCA CCCCGGCGGT CGGCATCGTC TGCGACATGA TCGAGTTCTG CGCGAAGGAG
ATGCCGCGCT GGAACCCGGT GTCGATCAGC GGCTACCACA TCCGCGAGGC GGGGGCGACG
GCGCTGCAGG AGCTGGCGTT CACGCTCGCC GACGGCATCG AGTACGTGCA GGAGTGCGTG
GACCGCGGCA TGGACGTGGA CGCGTTCGCG CCGCGCCTCT CGTTCTTCTG GGACGTGCAC
AACGACCTGT TCGAGGAGGT CGCGAAGTTC CGCGCCGCGC GCCGGATCTG GGCGCGCACC
ATGAAGGAGC GCTTCGGCGC GAAGAAGCGC GAGTCGCTGC TGCTCCGCAC CCACGCGCAG
ACCGCGGGCG TCTCGCTCAC CGCGCAGCAG CCCTACAACA ACGTGGTCCG CGTGGCGCTC
CAGGCGTTCG CGGCGGTGCT GGGCGGCACC CAGTCGCTGC ACACCAACTC GCTCGACGAG
ACCTACGCGC TCCCCACCGA GGAGGCGGTC ACGGTCGCGC TCCGCACGCA ACAGATCATC
GCGCACGAGT CCGGCGCCGA CCGCGTGGTG GACCCGCTCG CCGGCAGCTA CTACGTCGAG
TACCTCACCG ACGAGATGGA GCGGCGCGCG ATCGAGTACC TGCGCCGCAT CGACGACATG
GGCGGCATGC TCCGCGCGGT CGAGGAGGGC TACCCGCAGC GCGAGATCGC CGAGAGCGCC
TACCGCTGGC AGCGCGAGGT CGAGAGCAAC GAGCGGCTGG TGGTGGGCGT GAACGCGTTC
CAGGCGCGCG AGGAGCAGCA GATCCCGCTG CTCCGCATCG ACGAGACGGT CGCGCGCGAG
CAGGTGGAGC GCCTGAAGGC GGTGAAGGCG CGGCGCAACG GCGCCCAGGT GGCCGCGGCG
CTCGCCGGCG TGGAGCGGGC GGCGCGCGAG GGGACGAACG TCGTCCCGCC GGTCGTCGAG
GCGGTGAAGG CCTACGCGAC GCTGGGCGAG ATCGCCGACA CCTTCCGGAA GGTGCACGGG
ACCTACCGCG AGGACGGCCG GTTCTAG
|
|---|
| Protein sequence | MGSKPAKDQT RRVEKRGDTP KAPDRAERPL YGRDEIARVL EARDRWTQDE LAEALARLPR
RKAAFQTDSG IPIPDVIDPA HLPEHDFLRD VGYPGAYPFT RGPQPTMYRG RLWTMRQFAG
FGTPADTNQR FKYLLAHGVN GLSTAFDMPA LMGYDADHPM SRGEVGKEGV AISTLEDFEI
LFDGIPLGDV TTSMTINATA VIALAMYVAV AEKQGVPRAK LGGTLQADML KEYIAQKEWM
IPPTPAVGIV CDMIEFCAKE MPRWNPVSIS GYHIREAGAT ALQELAFTLA DGIEYVQECV
DRGMDVDAFA PRLSFFWDVH NDLFEEVAKF RAARRIWART MKERFGAKKR ESLLLRTHAQ
TAGVSLTAQQ PYNNVVRVAL QAFAAVLGGT QSLHTNSLDE TYALPTEEAV TVALRTQQII
AHESGADRVV DPLAGSYYVE YLTDEMERRA IEYLRRIDDM GGMLRAVEEG YPQREIAESA
YRWQREVESN ERLVVGVNAF QAREEQQIPL LRIDETVARE QVERLKAVKA RRNGAQVAAA
LAGVERAARE GTNVVPPVVE AVKAYATLGE IADTFRKVHG TYREDGRF
|
|---|
| |