| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0903 |
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| Symbol | |
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| ID | 4787285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 954708 |
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| End bp | 957998 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640089464 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001020100 |
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| Protein GI | 124266096 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TGTCCGCCGA GTTCAAGGCC CTGGCCGAGT ACCGCCCGAC GAACCGGGTG
CGCTTCGTCA CCGCCGCGAG CCTGTTCGAC GGCCACGACG CCGCGATCAA CATCATGCGG
CGCATCCTGA TGGGCATGGG CGCCGAGGTG ATCCACCTGG GCCACAACCG CTCGGTCGAC
GAGGTGGTGA CCGCGGCGCT GCAGGAAGAC GCCCAGGGCA TCGCGATCAG CTCCTACCAG
GGCGGCCACG TCGAGTACTT CAAGTACATG GTCGAGCTGC TGAAGGCGCG CGGCGGCGAG
CACATCCAGG TGTTCGGCGG TGGCGGCGGC GTCATCGTGC CGGCCGAGAT CCGCGACCTG
GCCGATAGCG GCGTGCGCAT CTTCAGCCCC GAGGACGGCC AGCGCATGGG CCTGCAGGGG
ATGATCGGCG AGATGGTGAT GCGCTGCGAC CGCGACCTGT CGCCGCATGC GCCAAAGACG
CTGGACGCGC TGCAGGGCCA CGCCGAGGGC GCCTGGCGCG CGCTGGCCCA GCTGATCACC
GCGCTGGAGA ACGGCCGGGC CGACCCGGCG CTGGTGCAGG CGCTGCACGC GAAGGCCCAG
GCGTGCCACG TGCCGGTGCT CGGCATCACC GGCACCGGTG GTGCCGGCAA GTCCAGCCTC
ACCGACGAAC TGATCCGCCG CCTGCGCCTC GACCAGGACG ACGCGCTGCG CGTCGCCGTG
ATCTCCATCG ACCCGTCGCG CCGCAAGAGC GGCGGCGCGC TGCTGGGCGA CCGCATCCGC
ATGAACGCGA TCGGGCCGTG GAGCCAGGGC CCGAGAGTCT TCATGCGCAG CCTGGCCACG
CGCGACACCG GCAGCGAGAT CAGCGCCGCG CTGCCCGAGG TGCTGGCGGC GGCCAAGGTG
GCCGGCTTCG ACCTGGTGAT CGTCGAGACC TCCGGCATCG GCCAGGGCGA CGCCGCCATC
GTGCCGCTGG TCGACGTGCC GATGTACGTG ATGACGCCGG AGTACGGCGC CGCCAGCCAG
CTCGAGAAGA TCGACATGCT CGACTTCGCC GAGTTCGTGG CGATCAACAA GTTCGACCGC
AAGGGCGCGC CCGACGCGCT GCGCGACGTG GCCAAGCAGG TGCAGCGCAA CCAGGAGGCC
TGGAAGCAGC GGCCCGAGGA GATGCCGGTG TTCGGCACCA TGGCCAGCCG CTTCAACGAC
GACGGCGTGA CCTCGCTCTA CCAGTCGCTG AAGCAGCGGC TGGCCGGCCT GGGCCTGCCG
GTGCGCGAGG GGCGGTTGCC GGCGGTGAGC ACGCGCCACA GCACCCACCA GACGCCGATC
GTGCCGGGCG CGCGCGTGCG CTACCTGGCC GACATCTCCG AGACCGTGCG CGGCTACAAG
CGGCACGCCC GCGAGCAGGC GCGCCTGGCC CGCGAGATCC AGCAGCTGCG GGCGAGCTCG
CGCATGCTGC ACGAGGCCAT CCCCGACAAG TACAAGGCGC GCGACGCGCT CGAGGAACAG
GCCGTGAGCC GCGAGGCGCG GCTCGACCCG CGCGCGAAGA AGCTGCTCGC CATGTGGCCC
GACCTGCAGA AGGCCTATGC CGGCGACGAA TACGTGGTGA AGATCCGCGA CAAGGAGATC
CGCACCACGC TCACCCACAC CACGCTGTCG GGCAACAAGA TCCGCAAGGT GGCGCTGCCG
CGCTACGAGG ACCACGGCGA GATCCTGCAG TGGCTGATGC TCGACAACGT GCCGGGCAGC
TTTCCGTACA GCGCCGGCAC CTTCGCGTTC AAGCGCGAGG GCGAGGACCC GACGCGCATG
TTCGCCGGCG AGGGCGACGC CTTCCGCACC AACCGGCGCT TCAAGCTGGT GAGCGAGGGC
ATGCCGGCCA AGCGGCTGTC GACCGCCTTC GACTCGGTCA CGCTGTACGG CCACGACCCC
GACCTGCGGC CCGACATCTA CGGCAAGGTC GGCAACTCGG GCGTCAGCAT CGCGACGCTC
GACGACCTGA AGGTGCTGTA CTCGGGCTTC GACCTCACCA ACCCCAGCAC CTCGGTGAGC
ATGACGATCA ATGGCCCGGC GCCGTCGATC CTGGCGATGT TCATGAACAC CGCCATCGAC
CAGAACCTGG AGAAGTTCGC GGCCGAGAAC GGCCGCGAGC CGACCGACAC CGAGGCCGCC
AAGATCCGCG AATGGGCGCT GGCCAACGTG CGCGGCACGG TGCAGGCCGA CATCCTGAAG
GAAGACCAGG GCCAGAACAC CTGCATCTTC AGCACCGAGT TCAGCCTGAA GGTGATGGGC
GACATCGCCG AGTACTTCGT GCACCACGAC GTGCGCAACT TCTACTCGGT GAGCATCAGC
GGCTACCACA TCGCCGAGGC CGGCGCGAAC CCCATCTCGC AGCTGGCCTT CACGCTCTCC
AACGGCTTCA CCTTCGTGGA AGCCTACCTG GCGCGCGGCA TGCACATCGA CGACTTCGCG
CCGAACCTGA GCTTCTTCTT CAGCAACGGC ATGGACCCGG AGTACACCGT GATGGGCCGC
GTGGCGCGGC GCATCTGGGC GGTGGCGATG CGCGACCGCT ACGGCGCCAA CGAGCGCAGC
CAGAAGCTCA AGTACCACGT GCAGACCAGC GGCCGCAGCC TGCACGCGCA GGAGATCGCC
TTCAACGACA TCCGCACCAC GCTGCAGGCG CTGATCGCGA TCTACGACAA CTGCAACTCG
CTGCACACCA ACGCCTACGA CGAGGCGATC ACCACGCCCA CCGAGGAGAG CGTGCGCCGC
GCGATGGCGA TCCAGCTCGT GATCAACCGC GAGTGGGGCC TGGCGAAGAA CGAGAACCCC
AACCAGGGCG CCTTCATCAT CGACGAGCTG ACCGAGCTGG TGGAGGAGGC GGTGCTGGCC
GAGTTCGAGA AGATCTCCGA GCGCGGCGGC GTGCTCGGCG CGATGGAGAC CGGCTACCAG
CGCGGCAAGA TCCAGGAGGA GAGCATGCAC TACGAGATGC TCAAGCACAC CGGCGAGTAC
CCGATCATCG GCGTGAACAC CTTCCGCAAC CCGCACGGCG ACCCGACGCC CGGCCACATC
GAGCTGGCGC GCTCCACCGA CGAGGAGAAG CAGTCGCAGC TGCAGCGCCT GGCCGACTTC
CACGCCCGCC ACGCGGCCGA GTCGCCGGCG ATGCTGGCGC GGCTGCAGCA GACCGTGATC
GACAACGGCA ACGTGTTCGA GGTGCTGATG GACGCGGTGC GGGTGTGCTC GCTGGGGCAG
ATCACCACCG CGCTGTTCGA GGTGGGTGGG CAGTACCGGC GCAGCATGTG A
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| Protein sequence | MTDLSAEFKA LAEYRPTNRV RFVTAASLFD GHDAAINIMR RILMGMGAEV IHLGHNRSVD
EVVTAALQED AQGIAISSYQ GGHVEYFKYM VELLKARGGE HIQVFGGGGG VIVPAEIRDL
ADSGVRIFSP EDGQRMGLQG MIGEMVMRCD RDLSPHAPKT LDALQGHAEG AWRALAQLIT
ALENGRADPA LVQALHAKAQ ACHVPVLGIT GTGGAGKSSL TDELIRRLRL DQDDALRVAV
ISIDPSRRKS GGALLGDRIR MNAIGPWSQG PRVFMRSLAT RDTGSEISAA LPEVLAAAKV
AGFDLVIVET SGIGQGDAAI VPLVDVPMYV MTPEYGAASQ LEKIDMLDFA EFVAINKFDR
KGAPDALRDV AKQVQRNQEA WKQRPEEMPV FGTMASRFND DGVTSLYQSL KQRLAGLGLP
VREGRLPAVS TRHSTHQTPI VPGARVRYLA DISETVRGYK RHAREQARLA REIQQLRASS
RMLHEAIPDK YKARDALEEQ AVSREARLDP RAKKLLAMWP DLQKAYAGDE YVVKIRDKEI
RTTLTHTTLS GNKIRKVALP RYEDHGEILQ WLMLDNVPGS FPYSAGTFAF KREGEDPTRM
FAGEGDAFRT NRRFKLVSEG MPAKRLSTAF DSVTLYGHDP DLRPDIYGKV GNSGVSIATL
DDLKVLYSGF DLTNPSTSVS MTINGPAPSI LAMFMNTAID QNLEKFAAEN GREPTDTEAA
KIREWALANV RGTVQADILK EDQGQNTCIF STEFSLKVMG DIAEYFVHHD VRNFYSVSIS
GYHIAEAGAN PISQLAFTLS NGFTFVEAYL ARGMHIDDFA PNLSFFFSNG MDPEYTVMGR
VARRIWAVAM RDRYGANERS QKLKYHVQTS GRSLHAQEIA FNDIRTTLQA LIAIYDNCNS
LHTNAYDEAI TTPTEESVRR AMAIQLVINR EWGLAKNENP NQGAFIIDEL TELVEEAVLA
EFEKISERGG VLGAMETGYQ RGKIQEESMH YEMLKHTGEY PIIGVNTFRN PHGDPTPGHI
ELARSTDEEK QSQLQRLADF HARHAAESPA MLARLQQTVI DNGNVFEVLM DAVRVCSLGQ
ITTALFEVGG QYRRSM
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