More than 300 homologs were found in PanDaTox collection
for query gene Noca_4143 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010682  Rpic_0089  methylmalonyl-CoA mutase, large subunit  66.42 
 
 		 1095 aa  1363    Ralstonia pickettii 12J  Bacteria  normal  0.571974  normal  1 
 
 
-
 
NC_010524  Lcho_3844  methylmalonyl-CoA mutase, large subunit  64.48 
 
 		 1096 aa  1357    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013757  Gobs_2225  methylmalonyl-CoA mutase, large subunit  72.85 
 
 		 1077 aa  1477    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.552157  n/a   
 
 
-
 
NC_003295  RSc0237  putative methylmalonyl-CoA mutase protein  66.14 
 
 		 1099 aa  1368    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.556775 
 
 
-
 
NC_007298  Daro_0243  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  63.88 
 
 		 1116 aa  1357    Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_1029  methylmalonyl-CoA mutase, large subunit  72.61 
 
 		 1081 aa  1514    Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2811  methylmalonyl-CoA mutase, N-terminal  77.79 
 
 		 1080 aa  1632    Thermobifida fusca YX  Bacteria  normal  0.153738  n/a   
 
 
-
 
NC_007347  Reut_A0253  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  65.34 
 
 		 1093 aa  1373    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1893  methylmalonyl-CoA mutase-like  49.56 
 
 		 1139 aa  1019    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_06870  methylmalonyl-CoA mutase  52.54 
 
 		 1139 aa  1157    Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_24570  methylmalonyl-CoA mutase family protein  71.71 
 
 		 1079 aa  1470    Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.990884 
 
 
-
 
NC_007517  Gmet_1722  methylmalonyl-CoA mutase-like  60.33 
 
 		 1082 aa  1222    Geobacter metallireducens GS-15  Bacteria  normal  0.181913  normal  0.685956 
 
 
-
 
NC_009675  Anae109_3169  methylmalonyl-CoA mutase, large subunit  63.68 
 
 		 1097 aa  1292    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3652  methylmalonyl-CoA mutase  68.65 
 
 		 1105 aa  1416    Frankia sp. CcI3  Bacteria  normal  0.587052  normal  1 
 
 
-
 
NC_009483  Gura_1342  methylmalonyl-CoA mutase, large subunit  59.35 
 
 		 1115 aa  1220    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3612  methylmalonyl-CoA mutase  64.25 
 
 		 1113 aa  1364    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4054  methylmalonyl-CoA mutase  62.61 
 
 		 1139 aa  1325    Polaromonas sp. JS666  Bacteria  normal  0.632309  normal  0.527832 
 
 
-
 
NC_007951  Bxe_A4277  methylmalonyl-CoA mutase  73.67 
 
 		 1272 aa  875    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.0862944 
 
 
-
 
NC_013411  GYMC61_3448  methylmalonyl-CoA mutase, large subunit  59.23 
 
 		 1086 aa  1251    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007973  Rmet_0210  methylmalonyl-CoA mutase  65.73 
 
 		 1093 aa  1375    Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3339  methylmalonyl-CoA mutase, large subunit  59.28 
 
 		 1085 aa  1240    Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2188  methylmalonyl-CoA mutase, large subunit  61.28 
 
 		 1086 aa  1276    Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00063386  n/a   
 
 
-
 
NC_010681  Bphyt_0431  methylmalonyl-CoA mutase, large subunit  71.69 
 
 		 1298 aa  874    Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0095  methylmalonyl-CoA mutase, large subunit  66.42 
 
 		 1095 aa  1381    Ralstonia pickettii 12D  Bacteria  normal  0.778156  normal  0.758233 
 
 
-
 
NC_011662  Tmz1t_3371  methylmalonyl-CoA mutase, large subunit  65.46 
 
 		 1088 aa  1378    Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3556  Methylmalonyl-CoA mutase  72.97 
 
 		 1073 aa  1500    Streptosporangium roseum DSM 43021  Bacteria  normal  0.0534628  normal  0.668167 
 
 
-
 
NC_013739  Cwoe_2289  Methylmalonyl-CoA mutase  56.89 
 
 		 1144 aa  1131    Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0243844 
 
 
-
 
NC_013093  Amir_2277  methylmalonyl-CoA mutase, large subunit  71.98 
 
 		 1092 aa  1456    Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2332  methylmalonyl-CoA mutase  53.28 
 
 		 1146 aa  1186    Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2838  methylmalonyl-CoA mutase, large subunit  58.97 
 
 		 1082 aa  1224    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_4143  methylmalonyl-CoA mutase, large subunit  100 
 
 		 1043 aa  2116    Nocardioides sp. JS614  Bacteria  normal  0.578246  n/a   
 
 
-
 
NC_012918  GM21_1375  methylmalonyl-CoA mutase, large subunit  58.51 
 
 		 1082 aa  1218    Geobacter sp. M21  Bacteria  n/a    normal  0.0491198 
 
 
-
 
NC_013061  Phep_1164  Methylmalonyl-CoA mutase  54.3 
 
 		 1131 aa  1207    Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_3524  methylmalonyl-CoA mutase, large subunit  64 
 
 		 1097 aa  1353    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_1068  Methylmalonyl-CoA mutase  54.77 
 
 		 1108 aa  1177    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_2256  Methylmalonyl-CoA mutase  55.73 
 
 		 1110 aa  1196    Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.642899 
 
 
-
 
NC_008825  Mpe_A0903  methylmalonyl-CoA mutase  64.75 
 
 		 1096 aa  1355    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_0156  methylmalonyl-CoA mutase, large subunit  63.84 
 
 		 1127 aa  1330    Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.308187 
 
 
-
 
NC_014165  Tbis_1618  methylmalonyl-CoA mutase large subunit  69.77 
 
 		 1083 aa  1438    Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1077  methylmalonyl-CoA mutase, large subunit  68.45 
 
 		 1133 aa  1424    Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.953537 
 
 
-
 
NC_013501  Rmar_0923  Methylmalonyl-CoA mutase  51.62 
 
 		 1150 aa  635  1e-180  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  39.93 
 
 		 570 aa  331  4e-89  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  42.25 
 
 		 557 aa  330  6e-89  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  43.25 
 
 		 563 aa  330  9e-89  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  42.47 
 
 		 564 aa  330  9e-89  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal  1 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  39.58 
 
 		 567 aa  322  1.9999999999999998e-86  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  41.93 
 
 		 550 aa  321  3.9999999999999996e-86  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  38.94 
 
 		 560 aa  320  7e-86  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  39.49 
 
 		 566 aa  313  1e-83  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000166 
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  40.39 
 
 		 559 aa  310  9e-83  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  39.16 
 
 		 550 aa  309  2.0000000000000002e-82  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  40.55 
 
 		 543 aa  308  4.0000000000000004e-82  Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal  1 
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  39.7 
 
 		 569 aa  308  5.0000000000000004e-82  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  36.17 
 
 		 551 aa  307  7e-82  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  38.21 
 
 		 559 aa  306  1.0000000000000001e-81  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  41.59 
 
 		 551 aa  306  2.0000000000000002e-81  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  38.92 
 
 		 551 aa  304  7.000000000000001e-81  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_013124  Afer_1791  methylmalonyl-CoA mutase, large subunit  42.44 
 
 		 556 aa  303  1e-80  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0908947  n/a   
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  38.52 
 
 		 558 aa  303  2e-80  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  38.86 
 
 		 529 aa  302  2e-80  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  39.35 
 
 		 545 aa  301  3e-80  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  38.7 
 
 		 588 aa  300  7e-80  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  38.39 
 
 		 531 aa  300  7e-80  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  38.66 
 
 		 521 aa  300  9e-80  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  39 
 
 		 566 aa  300  1e-79  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  38.72 
 
 		 562 aa  299  2e-79  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  38.16 
 
 		 588 aa  298  3e-79  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  39.02 
 
 		 537 aa  298  4e-79  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  36.29 
 
 		 532 aa  298  4e-79  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  38.44 
 
 		 588 aa  298  4e-79  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  41.73 
 
 		 551 aa  297  6e-79  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  38.31 
 
 		 565 aa  297  8e-79  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  39.58 
 
 		 566 aa  297  8e-79  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  37.74 
 
 		 559 aa  296  1e-78  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  40.94 
 
 		 548 aa  296  2e-78  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.473507 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  38.16 
 
 		 555 aa  295  4e-78  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  37.75 
 
 		 563 aa  294  5e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  36.65 
 
 		 551 aa  294  6e-78  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  39.1 
 
 		 560 aa  294  6e-78  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013743  Htur_1992  methylmalonyl-CoA mutase, large subunit  36.76 
 
 		 560 aa  294  6e-78  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  36.3 
 
 		 559 aa  294  7e-78  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_013744  Htur_3831  methylmalonyl-CoA mutase, large subunit  38.61 
 
 		 566 aa  293  1e-77  Haloterrigena turkmenica DSM 5511  Archaea  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  37.64 
 
 		 562 aa  293  1e-77  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  35.54 
 
 		 554 aa  292  2e-77  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  34.62 
 
 		 559 aa  292  3e-77  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  36.86 
 
 		 553 aa  290  9e-77  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  37.09 
 
 		 562 aa  290  1e-76  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.000975641 
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  35.87 
 
 		 559 aa  290  1e-76  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  38.13 
 
 		 518 aa  290  1e-76  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.380206 
 
 
-
 
NC_009050  Rsph17029_3657  methylmalonyl-CoA mutase, large subunit  38.33 
 
 		 563 aa  290  1e-76  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.748454  normal  0.0699604 
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  36.29 
 
 		 549 aa  288  4e-76  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  37.4 
 
 		 552 aa  288  5e-76  Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  38.06 
 
 		 549 aa  288  5e-76  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  38.06 
 
 		 549 aa  288  5e-76  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  37.86 
 
 		 549 aa  286  9e-76  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  38.11 
 
 		 562 aa  286  2.0000000000000002e-75  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal  1 
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  37.55 
 
 		 527 aa  286  2.0000000000000002e-75  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
NC_009440  Msed_0638  methylmalonyl-CoA mutase  36.43 
 
 		 553 aa  286  2.0000000000000002e-75  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  0.187219 
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  37.84 
 
 		 566 aa  286  2.0000000000000002e-75  Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
NC_013235  Namu_3099  methylmalonyl-CoA mutase, large subunit  37.61 
 
 		 567 aa  285  2.0000000000000002e-75  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000000149706  hitchhiker  0.00000336315 
 
 
-
 
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