Gene Strop_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3608 
Symbol 
ID5060083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4131406 
End bp4133094 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content69% 
IMG OID640475863 
Productmethylmalonyl-CoA mutase, large subunit 
Protein accessionYP_001160417 
Protein GI145596120 
COG category[I] Lipid transport and metabolism 
COG ID[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit 
TIGRFAM ID[TIGR00641] methylmalonyl-CoA mutase N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.898932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.283748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG ACGAGATCGC CGCTGGACGG AGACGCTGGC AGGACCGCTA CGATGCCGCG 
CGCAAACGGG ACGCCGACTT CACCACGCTC TCCGGGATGA CTGTCGCCCC CGTGTACGGG
CCGCCGGAGG GGGTGGATCA TCCCGGCTTT GAGCGGATCG GCTGGCCGGG CGAGTTCCCG
TACACCCGTG GTCTACACCC GACCGGCTAC CGGGGGCGGG CCTGGACCAT CCGGCAGTTC
GCCGGTTTCG GTAACGCCCG GCAGACCAAC GAGCGCTACA AGATGATCCT GGGCGCGGGG
GGCGGCGGGC TCTCCGTCGC CTTCGACATG CCCACGCTGA TGGGTCGTGA CTCGGATGAC
CCGCAGTCAC TCGGCGAGGT CGGGCACTGC GGGGTCGCGG TGGACAGCGC CGCGGACATG
GAGGTGCTCT TCGACGGCAT CGACCTGGCC GGTGTCACGA CGAGTATGAC CATCTCCGGG
CCGGCCGTCC CGGTGTTCTG CATGTATCTG ATCGCTGCCG AGCGGCAGGG CGCGGACCTC
TCCCGCCTGG ACGGCACCCT GCAGACAGAC ATCTTCAAGG AGTACATCGC GCAGAAGGAG
TGGCTCTTCG ACCCAGAGCC GCACCTGCGC CTCATCGGCG ACCTGATGGA GTACTGCGCT
CGCGAGATTC CCCGCTACAA GCCGCTCTCC GTCTCCGGCT ACCACATCCG GGAGGCGGGC
TCGACGGCCG CGCAGGAGCT GGCGTACACC CTCGCCGACG GCTTCGGCTA CGTCGAGCTG
GGCCTCTCCC GCGGCCTCGA CGTGAACGTC TTCGCCCCGG GCCTGAGCTT CTTCTTCGAT
TCCCATGTGG ACTTCTTCGA GGAGGTCGCG AAGTTCCGTG CCGCGCGCCG GATCTGGGCC
CGCTGGCTGC GCGACGTCTA CGGTGCCACG AGCGAGAAGG CGCAGTGGCT GCGCTTCCAC
ACCCAGACCG CCGGGGTCTC GCTGACCGCG CAGCAGCCGG TCAACAACGT GGTCCGGACG
GCCGTGGAGG CCCTCGCGGC CGTGCTCGGC GGCACCAACT CGCTGCACAC CAACGCCCTC
GACGAGACCC TCGCGCTGCC CACCGACGAG TCGGCCGAGA TCGCCCTGCG GACCCAGCAG
GTGTTGATGG AGGAGACCGG GGTGACCAGC GTGGCCGACC CGTTGGGCGG CTCCTGGTAC
GTCGAGGCGC TCACCGACAA GATCGAGGCC GAGGCGGAGG AGATCTTCGC CCGGATCCGG
CAGCTCGGTG GCGAGGGGCC GCACGAGATC GGTCCGATGA CCTCGGGAAT TCTGCGGGGG
ATTGAGGACG GTTGGTTCAC CGGACACATC GCCGAGGCGG CGTTCGCCTA CCAGCGGGCG
CTGGAGAAGG GCGAGAAGAA GATCGTCGGA GTCAACTGTC ACACCGGCAC GGTCGCCAAG
GACCTGGAGA TCCTGCGGAT CTCGCACGAG GTCGAGTTGG AGCAGCGGCG TACCCTCGGC
GAGCGAAAGG CAGCCCGGGA TGACGCCGAG GTCAGCGCGG CGTTGGAGCG GATGGTCGCG
GTCAGCCGGA CCAGCGGGAA CATGATCCCG GCCATGCTCG ACGCGGTCCG CGCCGAGGCG
ACCCTGGGCG AGATCTGCGA TGCGCTGCGC CTCGAGTGGG GTGTCTACCG CGAACCGGCT
CGCTTCTGA
 
Protein sequence
MNADEIAAGR RRWQDRYDAA RKRDADFTTL SGMTVAPVYG PPEGVDHPGF ERIGWPGEFP 
YTRGLHPTGY RGRAWTIRQF AGFGNARQTN ERYKMILGAG GGGLSVAFDM PTLMGRDSDD
PQSLGEVGHC GVAVDSAADM EVLFDGIDLA GVTTSMTISG PAVPVFCMYL IAAERQGADL
SRLDGTLQTD IFKEYIAQKE WLFDPEPHLR LIGDLMEYCA REIPRYKPLS VSGYHIREAG
STAAQELAYT LADGFGYVEL GLSRGLDVNV FAPGLSFFFD SHVDFFEEVA KFRAARRIWA
RWLRDVYGAT SEKAQWLRFH TQTAGVSLTA QQPVNNVVRT AVEALAAVLG GTNSLHTNAL
DETLALPTDE SAEIALRTQQ VLMEETGVTS VADPLGGSWY VEALTDKIEA EAEEIFARIR
QLGGEGPHEI GPMTSGILRG IEDGWFTGHI AEAAFAYQRA LEKGEKKIVG VNCHTGTVAK
DLEILRISHE VELEQRRTLG ERKAARDDAE VSAALERMVA VSRTSGNMIP AMLDAVRAEA
TLGEICDALR LEWGVYREPA RF