Gene Rmar_0923 details

Gene Information

• Locus tag: Rmar_0923
• ID: 8567561
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1046490
• End bp: 1049942
• Gene Length: 3453 bp
• Protein Length: 1150 aa
• Translation table: 11
• GC content: 64%
• Product: Methylmalonyl-CoA mutase
• Protein accession: YP_003290205
• Protein GI: 268316486

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACGC GTGTCTATAA ACCCAAGCAC CGCATTCGCT TTGTCACGGC AGCCAGCCTT 
TTCGACGGAC ACGACGCCGC CATCAATCTG ATCCGGCGTT TGCTCCAGGC CAGCGGCGCC 
GAGGTCATTC ATCTGGGCCA CAACCGCTCC GTCCACGAGA TCGTCGAGAC GGCCATCCAG 
GAGGACGTGC AGGGCATCGC CGTCTCGAGC TACCAGGGCG GGCACATGGA GTTTTTCAAA 
TACATGATCG ACCTGCTCAG AGAGCGGGGC GCCTCGCACA TCAAGGTCTT CGGGGGCGGC 
GGCGGCGTGA TCGTGCCGGA AGAGATCCGG GAGCTGGAAG CCTACGGCGT CTGCAAGATC 
TTCTCGCCGG AAGACGGGCT GCGCATGGGC CTCCAGGGCA TGGTCAACTA CATGCTGGAG 
CAGTGCGACT TTCCGACCGT GCGCCAGCTC GAAGCCGAAG CGCTGGAACG GGTGCGGCAG 
CGGGACAAAA AAGCGCTGGC GCGCGCGCTG ACGGCCATCG AGTCGCGGCT GCTGGAGCAC 
GTGCCGGCGC ACCTGGTGCC CGAGCCGGCC GGCGGCGACG GCGCGCCGGC GGCCGAGGTG 
CGCACGGCGC CGGTGGTGGG CATCACCGGT ACCGGCGGCG CGGGCAAATC GACGCTGACC 
GACGAGCTGA TCCGCCGCTT TCTAAACGAC TTCGAGGACA TTCACATCGC TGTGCTTTCG 
GTGGACCCCA CGCGGCGGCG CACCGGCGGC GCCTTGCTGG GCGACCGCAT CCGCATGAAC 
GCGCTCTATG GCGAGCACGG CGACCGCGTC TACATGCGTT CGTTCGCCAC GCGCCAGGCC 
CATCGCTCCA TCTCCGAATC GCTGCAAGAG GCCATCGACG TGTGCCGGGC AGCCGGCTTC 
GACCTGATCT TTGTCGAAAC GGCCGGTATC GGCCAGAGCG ACACAGAGAT CGTGGACCTG 
GCCGACCTCA CGATCTACGT GATGACCCAG GACTACGGCG CCCCGACCCA GCTCGAAAAG 
ATCGGCATGC TGGACCTGGC CGATCTGATC GCGCTGAACA AGTTCGAAAA GCGGGGCAGC 
CAGGACGCGT TGCGCGACAT CCGCAAGCAG GTGCAGCGCA ACCGGGGCGC CTTCGATCAA 
CCCCTGGAGG CCATGCCCGT CTTTCCGACC ATGGCCTCGC ACTTCAACGA TCCGGGCACC 
ACGCGGCTTT ATCTGGCGCT GCTCGACCTG CTCAACGAAC GCTTCCGCTT CGGCCGGACT 
TCCCGGCTCT TCAAACCCGA GGAGCTTCCG GAAGTCGACC CTGAAAAACT GGCCATCATT 
CCCCCGAAGC GGGAGCGCTA CCTGGGCGAG ATCGTCGAGA CCTGCCGCAA CTACCGGAAG 
TGGGTGGAAG AGCAGGTGAC CTATGCCCGC AAGTGGGGCG AGGCGGTAGG GGCGCGACGT 
CAGGTGGAGC GCTGGGCGCC CGAAGACCGC GAGCTGCTGC TGGAGCGGCT CGATCAGATG 
ATCCGCCACT GGTGGGACAA GCTCGACGCC CGCTGCAAAC GCATCCTGGA AGCGTGGGAC 
GCCACGGCCG AGCGCTACCG CCAGGAGACG TTCACCTACA AAGTGCGGGA TAAGGAAATC 
ACCACGCCGC TATACCACAC CTCGCTGGCG GGTACGAAGG TGCCGCGTGT GGCCCTGCCG 
CGCTACGAAG ATCCCGGCGA GCGCCTGCGC TTTGCACTGC TGGAAAACCT GCCCGGCTAC 
TTCCCCTACA CGGCCGGCGT CTATCCGTTC AAGCGCACCG AGGAGGAGCC CACGCGCATG 
TTCGCGGGTG AGGGGACGCC CGAGCGCACC AACCGCCGCT TCCATTACAT CTCCGAGGGC 
ATGTCGGCCA GGCGGCTTTC GACCGCTTTC GACTCGGTGA CGCTCTATGG CCGCGATCCG 
GACGAACGCC CGGACATCTA CGGCAAGATC GGCAACGCCG GCGTGTCGAT CTGCACGCTC 
GACGACATGA AGAAGCTCTA TTCGGGCTTC AACCTGTGCG ACCCGAAGAC GAGCGTCTCG 
ATGACGATCA ACGGGCCGGC GCCCATGATC CTGGCCATGT TCCTGAACAC GGCCATCGAC 
CAGCAGGTGG AGTACTACCT GCGGGAGATC GGGCGCTGGG AAGAAGTCGA GCGGGCTATC 
GCCGAGCGGC TGGGCGACGA GCGGCCACGC TACGTGCCCT TCGGGCCACA GGGACGGCTC 
GACAGCCTGC CGCCCACGCA CGACGGCACC GGACTGGGAC TCCTGGGCAC CAGCGGCGCC 
GAACTGGTCG AATGGGGTCT GCTCGACCGC GAAACCTACG AAAACATCAA AGCCCGGGCC 
CTTTCGGTCG TGCGCGGGAC CGTGCAGGCC GACATCCTCA AAGAAGACCA GGCGCAGAAC 
ACCTGCATCT TTTCGACCGA GTTTGCGCTG CGCCTGATGG GCGACGTGCA GCAGTATTTC 
ATCGACCACA AGGTCCGCAA CTTCTACTCG GTCTCGATCT CCGGCTACCA CATCGCCGAA 
GCCGGCGCCA ACCCGATCAC GCAGCTGGCC TTCACGCTGG CCAACGGCTT CACCTACGTG 
GAGTATTACC TGAGCCGGGG CATGCACATC GACGACTTCG CGCCGAACCT GTCGTTCTTC 
TTCTCGAACG GCATGGATCC GGAGTACAGC GTGATCGGCC GGGTGGCCCG GCGCATCTGG 
GCCGTGGTGA TGCGGGATAA GTACGGCGCC AACGAGCGGA GCCAGAAGCT CAAGTACCAC 
ATTCAGACCT CGGGGCGTAG CCTGCACGCC AAGGAGATCG CCTTCAACGA CATCCGCACG 
ACGCTCCAGG CGCTCATGGC CATCTACGAC AACTGCAACT CACTGCACAC GAACGCCTAC 
GACGAGGCCA TCACGACGCC CACCGAGGAA AGCGTACGCC GCGCCATCGC CATCCAGCTC 
ATCATCAACA AAGAGTTCGG GCTGGCCAAG AACGAAAACC CGCTGCAGGG CAGCTTCATC 
ATCGAGGAAT TGACCGACCT GGTCGAAGAA GCGGTGCTGC AGGAGTTTGA GCGTATCGAC 
CGACGCGGTG GCGTGCTGGG CGCCATGGAG TCGATGTACC AGCGCGGCAA GATTCAGGAG 
GAGTCGCTGC TCTACGAGCG CAAAAAGCAC AGCGGCGAGC TGCCGATCAT CGGCGTGAAC 
ACGTTTCTGC CGAAGAACGG CGAGTCGCAC GATGCTCCGA CGGCGCTGAT GCGCTCGCAT 
GAGGAGGAAA AACGCCACCA GATTGAAAAC CTGCGGGCCT TCCAGCGGCG CAATGCGCAT 
CGGGCGCCGC GCATGCTGGA GCGGCTGCAG CAGGTGGCGC GTCGCGGTGA GAACGTGTTT 
GCCGAGCTGA TGGAGACCGT GCGCTATTGC TCGCTCGGCC AGATTACACA GGCGCTGTTC 
GAGGTCGGCG GCGAGTACCG GCGCAATATG TAG 

 

Protein sequence

METRVYKPKH RIRFVTAASL FDGHDAAINL IRRLLQASGA EVIHLGHNRS VHEIVETAIQ 
EDVQGIAVSS YQGGHMEFFK YMIDLLRERG ASHIKVFGGG GGVIVPEEIR ELEAYGVCKI 
FSPEDGLRMG LQGMVNYMLE QCDFPTVRQL EAEALERVRQ RDKKALARAL TAIESRLLEH 
VPAHLVPEPA GGDGAPAAEV RTAPVVGITG TGGAGKSTLT DELIRRFLND FEDIHIAVLS 
VDPTRRRTGG ALLGDRIRMN ALYGEHGDRV YMRSFATRQA HRSISESLQE AIDVCRAAGF 
DLIFVETAGI GQSDTEIVDL ADLTIYVMTQ DYGAPTQLEK IGMLDLADLI ALNKFEKRGS 
QDALRDIRKQ VQRNRGAFDQ PLEAMPVFPT MASHFNDPGT TRLYLALLDL LNERFRFGRT 
SRLFKPEELP EVDPEKLAII PPKRERYLGE IVETCRNYRK WVEEQVTYAR KWGEAVGARR 
QVERWAPEDR ELLLERLDQM IRHWWDKLDA RCKRILEAWD ATAERYRQET FTYKVRDKEI 
TTPLYHTSLA GTKVPRVALP RYEDPGERLR FALLENLPGY FPYTAGVYPF KRTEEEPTRM 
FAGEGTPERT NRRFHYISEG MSARRLSTAF DSVTLYGRDP DERPDIYGKI GNAGVSICTL 
DDMKKLYSGF NLCDPKTSVS MTINGPAPMI LAMFLNTAID QQVEYYLREI GRWEEVERAI 
AERLGDERPR YVPFGPQGRL DSLPPTHDGT GLGLLGTSGA ELVEWGLLDR ETYENIKARA 
LSVVRGTVQA DILKEDQAQN TCIFSTEFAL RLMGDVQQYF IDHKVRNFYS VSISGYHIAE 
AGANPITQLA FTLANGFTYV EYYLSRGMHI DDFAPNLSFF FSNGMDPEYS VIGRVARRIW 
AVVMRDKYGA NERSQKLKYH IQTSGRSLHA KEIAFNDIRT TLQALMAIYD NCNSLHTNAY 
DEAITTPTEE SVRRAIAIQL IINKEFGLAK NENPLQGSFI IEELTDLVEE AVLQEFERID 
RRGGVLGAME SMYQRGKIQE ESLLYERKKH SGELPIIGVN TFLPKNGESH DAPTALMRSH 
EEEKRHQIEN LRAFQRRNAH RAPRMLERLQ QVARRGENVF AELMETVRYC SLGQITQALF 
EVGGEYRRNM