More than 300 homologs were found in PanDaTox collection
for query gene Rmar_0923 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_3844  methylmalonyl-CoA mutase, large subunit  58.37 
 
 		 1096 aa  1294    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_014230  CA2559_06870  methylmalonyl-CoA mutase  59.72 
 
 		 1139 aa  1374    Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0237  putative methylmalonyl-CoA mutase protein  60.28 
 
 		 1099 aa  1310    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.556775 
 
 
-
 
NC_013510  Tcur_1029  methylmalonyl-CoA mutase, large subunit  59.45 
 
 		 1081 aa  1301    Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0243  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  59.46 
 
 		 1116 aa  1327    Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2811  methylmalonyl-CoA mutase, N-terminal  56.99 
 
 		 1080 aa  1207    Thermobifida fusca YX  Bacteria  normal  0.153738  n/a   
 
 
-
 
NC_007347  Reut_A0253  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  59.18 
 
 		 1093 aa  1290    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1893  methylmalonyl-CoA mutase-like  56.27 
 
 		 1139 aa  1218    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1722  methylmalonyl-CoA mutase-like  62.12 
 
 		 1082 aa  1388    Geobacter metallireducens GS-15  Bacteria  normal  0.181913  normal  0.685956 
 
 
-
 
NC_009675  Anae109_3169  methylmalonyl-CoA mutase, large subunit  59.9 
 
 		 1097 aa  1286    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_2225  methylmalonyl-CoA mutase, large subunit  56.83 
 
 		 1077 aa  1221    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.552157  n/a   
 
 
-
 
NC_007777  Francci3_3652  methylmalonyl-CoA mutase  57.22 
 
 		 1105 aa  1242    Frankia sp. CcI3  Bacteria  normal  0.587052  normal  1 
 
 
-
 
NC_013093  Amir_2277  methylmalonyl-CoA mutase, large subunit  57.29 
 
 		 1092 aa  1231    Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3612  methylmalonyl-CoA mutase  57.78 
 
 		 1113 aa  1296    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1342  methylmalonyl-CoA mutase, large subunit  62.9 
 
 		 1115 aa  1418    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_3371  methylmalonyl-CoA mutase, large subunit  60.17 
 
 		 1088 aa  1332    Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4054  methylmalonyl-CoA mutase  57.06 
 
 		 1139 aa  1267    Polaromonas sp. JS666  Bacteria  normal  0.632309  normal  0.527832 
 
 
-
 
NC_007951  Bxe_A4277  methylmalonyl-CoA mutase  63.47 
 
 		 1272 aa  847    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.0862944 
 
 
-
 
NC_012793  GWCH70_3339  methylmalonyl-CoA mutase, large subunit  63.31 
 
 		 1085 aa  1417    Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_0210  methylmalonyl-CoA mutase  59.32 
 
 		 1093 aa  1299    Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_0923  Methylmalonyl-CoA mutase  100 
 
 		 1150 aa  2372    Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2188  methylmalonyl-CoA mutase, large subunit  55.43 
 
 		 1086 aa  761    Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00063386  n/a   
 
 
-
 
NC_013061  Phep_1164  Methylmalonyl-CoA mutase  62.5 
 
 		 1131 aa  1481    Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1618  methylmalonyl-CoA mutase large subunit  60.02 
 
 		 1083 aa  1296    Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_24570  methylmalonyl-CoA mutase family protein  58.63 
 
 		 1079 aa  1265    Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.990884 
 
 
-
 
NC_010681  Bphyt_0431  methylmalonyl-CoA mutase, large subunit  63.77 
 
 		 1298 aa  857    Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_2256  Methylmalonyl-CoA mutase  61.64 
 
 		 1110 aa  1390    Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.642899 
 
 
-
 
NC_009441  Fjoh_2332  methylmalonyl-CoA mutase  59.37 
 
 		 1146 aa  1373    Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_0095  methylmalonyl-CoA mutase, large subunit  60.75 
 
 		 1095 aa  1322    Ralstonia pickettii 12D  Bacteria  normal  0.778156  normal  0.758233 
 
 
-
 
NC_013411  GYMC61_3448  methylmalonyl-CoA mutase, large subunit  63.19 
 
 		 1086 aa  1430    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008781  Pnap_3524  methylmalonyl-CoA mutase, large subunit  57.59 
 
 		 1097 aa  1280    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2289  Methylmalonyl-CoA mutase  60.26 
 
 		 1144 aa  1309    Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0243844 
 
 
-
 
NC_013595  Sros_3556  Methylmalonyl-CoA mutase  58.57 
 
 		 1073 aa  1266    Streptosporangium roseum DSM 43021  Bacteria  normal  0.0534628  normal  0.668167 
 
 
-
 
NC_008825  Mpe_A0903  methylmalonyl-CoA mutase  59.06 
 
 		 1096 aa  1292    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_2838  methylmalonyl-CoA mutase, large subunit  62.37 
 
 		 1082 aa  1411    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1077  methylmalonyl-CoA mutase, large subunit  57.42 
 
 		 1133 aa  1238    Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.953537 
 
 
-
 
NC_010622  Bphy_0156  methylmalonyl-CoA mutase, large subunit  58.12 
 
 		 1127 aa  1288    Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.308187 
 
 
-
 
NC_010682  Rpic_0089  methylmalonyl-CoA mutase, large subunit  60.49 
 
 		 1095 aa  1311    Ralstonia pickettii 12J  Bacteria  normal  0.571974  normal  1 
 
 
-
 
NC_012918  GM21_1375  methylmalonyl-CoA mutase, large subunit  62.89 
 
 		 1082 aa  1437    Geobacter sp. M21  Bacteria  n/a    normal  0.0491198 
 
 
-
 
NC_013132  Cpin_1068  Methylmalonyl-CoA mutase  61.1 
 
 		 1108 aa  1406    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_4143  methylmalonyl-CoA mutase, large subunit  52.19 
 
 		 1043 aa  635  1e-180  Nocardioides sp. JS614  Bacteria  normal  0.578246  n/a   
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  37.9 
 
 		 551 aa  256  1.0000000000000001e-66  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  39.08 
 
 		 550 aa  253  1e-65  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  42.01 
 
 		 557 aa  252  2e-65  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  37.26 
 
 		 559 aa  251  6e-65  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  37.53 
 
 		 537 aa  250  1e-64  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  39.46 
 
 		 560 aa  249  2e-64  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  37.37 
 
 		 551 aa  249  2e-64  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  39.4 
 
 		 570 aa  248  4.9999999999999997e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  37.63 
 
 		 551 aa  246  9.999999999999999e-64  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  41.42 
 
 		 563 aa  244  5e-63  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  39.45 
 
 		 559 aa  244  6e-63  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  38.38 
 
 		 558 aa  243  2e-62  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  38.54 
 
 		 517 aa  241  8e-62  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.593051 
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  38.15 
 
 		 554 aa  241  8e-62  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  40.38 
 
 		 588 aa  239  2e-61  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  37.63 
 
 		 552 aa  239  3e-61  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  40.11 
 
 		 588 aa  238  3e-61  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  38.86 
 
 		 529 aa  239  3e-61  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  38.25 
 
 		 542 aa  238  4e-61  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  38.86 
 
 		 531 aa  238  4e-61  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  35.66 
 
 		 549 aa  238  5.0000000000000005e-61  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  38.75 
 
 		 560 aa  238  6e-61  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  42.09 
 
 		 564 aa  238  7e-61  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal  1 
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  39.35 
 
 		 559 aa  237  1.0000000000000001e-60  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  37.53 
 
 		 552 aa  237  1.0000000000000001e-60  Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  37.3 
 
 		 532 aa  236  1.0000000000000001e-60  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  40.49 
 
 		 545 aa  236  2.0000000000000002e-60  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  37.57 
 
 		 559 aa  236  2.0000000000000002e-60  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  36.14 
 
 		 549 aa  235  3e-60  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  37.77 
 
 		 559 aa  235  3e-60  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  39.02 
 
 		 521 aa  236  3e-60  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  39.57 
 
 		 518 aa  235  3e-60  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.380206 
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  39.84 
 
 		 588 aa  235  4.0000000000000004e-60  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  39.26 
 
 		 555 aa  234  6e-60  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  39.06 
 
 		 563 aa  234  7.000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  38.52 
 
 		 550 aa  234  9e-60  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  36.14 
 
 		 549 aa  233  1e-59  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  35.9 
 
 		 549 aa  233  2e-59  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  39.12 
 
 		 562 aa  232  4e-59  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  38.01 
 
 		 526 aa  232  4e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  38.63 
 
 		 527 aa  232  4e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  38.92 
 
 		 543 aa  231  5e-59  Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal  1 
 
 
-
 
NC_009253  Dred_1768  methylmalonyl-CoA mutase, large subunit  36.29 
 
 		 560 aa  231  5e-59  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0288235  n/a   
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  36.39 
 
 		 553 aa  231  8e-59  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  40.44 
 
 		 565 aa  230  1e-58  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  38.69 
 
 		 562 aa  229  3e-58  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  37.7 
 
 		 569 aa  229  3e-58  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  38.86 
 
 		 562 aa  228  4e-58  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.000975641 
 
 
-
 
NC_013595  Sros_1703  Methylmalonyl-CoA mutase  40.05 
 
 		 555 aa  228  5.0000000000000005e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.236995 
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  36.87 
 
 		 566 aa  227  8e-58  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009972  Haur_4552  methylmalonyl-CoA mutase, large subunit  36.18 
 
 		 521 aa  227  9e-58  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_4569  methylmalonyl-CoA mutase  36.36 
 
 		 703 aa  227  1e-57  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.365134 
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  36.14 
 
 		 560 aa  227  1e-57  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  40.82 
 
 		 551 aa  227  1e-57  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  37.89 
 
 		 567 aa  227  1e-57  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  40.71 
 
 		 551 aa  227  1e-57  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  37.1 
 
 		 559 aa  226  2e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1393  methylmalonyl-CoA mutase large subunit  36.5 
 
 		 578 aa  225  3e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  36.39 
 
 		 562 aa  226  3e-57  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal  1 
 
 
-
 
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