More than 300 homologs were found in PanDaTox collection
for query gene Gmet_3251 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  91.3 
 
 
552 aa  1034    Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  84.09 
 
 
550 aa  962    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  87.86 
 
 
551 aa  1010    Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  67.6 
 
 
559 aa  776    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.220657 
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  55.86 
 
 
588 aa  645    Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  61.75 
 
 
526 aa  654    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  60.37 
 
 
545 aa  681    Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  56.9 
 
 
532 aa  638    Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  63.24 
 
 
560 aa  693    Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  67.03 
 
 
559 aa  761    Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  69.93 
 
 
554 aa  771    Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  56.04 
 
 
588 aa  646    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  100 
 
 
552 aa  1141    Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  87.86 
 
 
551 aa  1004    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  68.98 
 
 
549 aa  767    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  55.49 
 
 
588 aa  638    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_013061  Phep_3607  methylmalonyl-CoA mutase, large subunit  64.99 
 
 
515 aa  670    Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  72.36 
 
 
560 aa  835    Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  58.68 
 
 
563 aa  683    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal 
 
 
-
 
NC_013739  Cwoe_5523  methylmalonyl-CoA mutase, large subunit  59.43 
 
 
537 aa  644    Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  63.27 
 
 
559 aa  721    Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0726  methylmalonyl-CoA mutase, large subunit  60.51 
 
 
526 aa  644    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  55.76 
 
 
570 aa  647    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  68.98 
 
 
549 aa  771    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  57.59 
 
 
557 aa  677    Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  64.83 
 
 
542 aa  717    Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.85938 
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  61.43 
 
 
560 aa  682    Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  54.76 
 
 
559 aa  642    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  64.9 
 
 
517 aa  664    Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.593051 
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  63.29 
 
 
531 aa  691    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  57.88 
 
 
565 aa  659    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  61.2 
 
 
558 aa  694    Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal 
 
 
-
 
NC_008554  Sfum_0458  methylmalonyl-CoA mutase, large subunit  59.67 
 
 
559 aa  692    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.484451  normal  0.420898 
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  61.08 
 
 
559 aa  677    Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  84.42 
 
 
551 aa  946    Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  64.53 
 
 
537 aa  705    Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0115893 
 
 
-
 
NC_009380  Strop_0832  methylmalonyl-CoA mutase, large subunit  60.64 
 
 
547 aa  638    Salinispora tropica CNB-440  Bacteria  normal  0.682429  normal  0.0142114 
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  61.69 
 
 
518 aa  645    Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.380206 
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  70.24 
 
 
559 aa  776    Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  68.25 
 
 
549 aa  778    Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  69.16 
 
 
549 aa  772    Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  61.69 
 
 
529 aa  655    Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal 
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  62.38 
 
 
521 aa  681    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  57.07 
 
 
564 aa  647    Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal 
 
 
-
 
NC_013743  Htur_1992  methylmalonyl-CoA mutase, large subunit  61.9 
 
 
560 aa  684    Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  60.28 
 
 
527 aa  632  1e-180  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.140535 
 
 
-
 
NC_008009  Acid345_1454  methylmalonyl-CoA mutase  54.7 
 
 
599 aa  631  1e-180  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1909  methylmalonyl-CoA mutase, large subunit  55.15 
 
 
560 aa  633  1e-180  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.699759  normal  0.051216 
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  56.29 
 
 
551 aa  630  1e-179  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  60.53 
 
 
527 aa  630  1e-179  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
NC_009253  Dred_1768  methylmalonyl-CoA mutase, large subunit  54.66 
 
 
560 aa  628  1e-179  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0288235  n/a   
 
 
-
 
NC_009972  Haur_4552  methylmalonyl-CoA mutase, large subunit  63.36 
 
 
521 aa  625  1e-178  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  54.51 
 
 
566 aa  624  1e-177  Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  53.61 
 
 
566 aa  624  1e-177  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  58.5 
 
 
543 aa  622  1e-177  Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal 
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  56.78 
 
 
551 aa  620  1e-176  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  53.97 
 
 
566 aa  621  1e-176  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  hitchhiker  0.00000166 
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  53.31 
 
 
566 aa  614  1e-175  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  54.71 
 
 
550 aa  614  1e-175  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.511417 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  53.24 
 
 
567 aa  611  9.999999999999999e-175  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013744  Htur_3831  methylmalonyl-CoA mutase, large subunit  52.53 
 
 
566 aa  611  1e-173  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  53.32 
 
 
553 aa  607  9.999999999999999e-173  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009440  Msed_0638  methylmalonyl-CoA mutase  52.96 
 
 
553 aa  604  1.0000000000000001e-171  Metallosphaera sedula DSM 5348  Archaea  normal  normal  0.187219 
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  55.11 
 
 
548 aa  604  1.0000000000000001e-171  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.473507 
 
 
-
 
NC_009675  Anae109_1988  methylmalonyl-CoA mutase, large subunit  54.76 
 
 
588 aa  600  1e-170  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  52.17 
 
 
569 aa  576  1.0000000000000001e-163  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1703  Methylmalonyl-CoA mutase  51.32 
 
 
555 aa  557  1e-157  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.236995 
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  50.36 
 
 
563 aa  555  1e-157  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  49.73 
 
 
562 aa  557  1e-157  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  50.27 
 
 
555 aa  553  1e-156  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  50.63 
 
 
562 aa  548  1e-155  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal 
 
 
-
 
NC_008826  Mpe_B0541  methylmalonyl-CoA mutase  50.63 
 
 
562 aa  548  1e-155  Methylibium petroleiphilum PM1  Bacteria  normal  0.46948  hitchhiker  0.00133344 
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  49.02 
 
 
562 aa  548  1e-154  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000975641 
 
 
-
 
NC_009050  Rsph17029_3657  methylmalonyl-CoA mutase, large subunit  50.81 
 
 
563 aa  547  1e-154  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.748454  normal  0.0699604 
 
 
-
 
NC_009338  Mflv_2387  methylmalonyl-CoA mutase, large subunit  51.02 
 
 
557 aa  546  1e-154  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.415653  normal 
 
 
-
 
NC_013235  Namu_3099  methylmalonyl-CoA mutase, large subunit  49.91 
 
 
567 aa  541  1e-153  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000000149706  hitchhiker  0.00000336315 
 
 
-
 
NC_008726  Mvan_4261  methylmalonyl-CoA mutase, large subunit  51.77 
 
 
529 aa  536  1e-151  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.440573 
 
 
-
 
NC_009921  Franean1_4310  methylmalonyl-CoA mutase, large subunit  52.61 
 
 
525 aa  536  1e-151  Frankia sp. EAN1pec  Bacteria  normal  normal  0.57946 
 
 
-
 
NC_014210  Ndas_0363  methylmalonyl-CoA mutase, large subunit  50.19 
 
 
575 aa  535  1e-150  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1791  methylmalonyl-CoA mutase, large subunit  54.35 
 
 
556 aa  534  1e-150  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0908947  n/a   
 
 
-
 
NC_009077  Mjls_3812  methylmalonyl-CoA mutase  51.03 
 
 
548 aa  527  1e-148  Mycobacterium sp. JLS  Bacteria  normal  0.887759  normal  0.207369 
 
 
-
 
NC_008146  Mmcs_3826  methylmalonyl-CoA mutase  50.84 
 
 
559 aa  523  1e-147  Mycobacterium sp. MCS  Bacteria  normal  0.642912  n/a   
 
 
-
 
NC_008705  Mkms_3900  methylmalonyl-CoA mutase  50.84 
 
 
548 aa  522  1e-147  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  52.52 
 
 
718 aa  520  1e-146  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0321557 
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  48.27 
 
 
562 aa  520  1e-146  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_013947  Snas_1393  methylmalonyl-CoA mutase large subunit  45.82 
 
 
578 aa  521  1e-146  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5086  methylmalonyl-CoA mutase, large subunit  46.68 
 
 
545 aa  516  1.0000000000000001e-145  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1190  methylmalonyl-CoA mutase  49.82 
 
 
712 aa  512  1e-144  Brucella suis 1330  Bacteria  normal  0.942727  n/a   
 
 
-
 
NC_011059  Paes_0875  methylmalonyl-CoA mutase, large subunit  51.52 
 
 
1081 aa  514  1e-144  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.036821 
 
 
-
 
NC_011988  Avi_5687  methylmalonyl-CoA mutase  51.02 
 
 
712 aa  512  1e-144  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  52.25 
 
 
706 aa  511  1e-143  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  50.54 
 
 
713 aa  511  1e-143  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2001  methylmalonyl-CoA mutase  51.35 
 
 
714 aa  510  1e-143  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4213  methylmalonyl-CoA mutase  51.02 
 
 
714 aa  505  9.999999999999999e-143  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  52.04 
 
 
716 aa  505  9.999999999999999e-143  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.17991 
 
 
-
 
NC_010498  EcSMS35_3053  methylmalonyl-CoA mutase  54.92 
 
 
714 aa  507  9.999999999999999e-143  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  52.94 
 
 
720 aa  506  9.999999999999999e-143  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  49 
 
 
712 aa  504  1e-141  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal 
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  52.74 
 
 
720 aa  503  1e-141  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0856  methylmalonyl-CoA mutase  51.73 
 
 
714 aa  502  1e-141  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
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