| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1068 |
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| Symbol | |
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| ID | 8357182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1275782 |
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| End bp | 1279108 |
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| Gene Length | 3327 bp |
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| Protein Length | 1108 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963222 |
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| Product | Methylmalonyl-CoA mutase |
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| Protein accession | YP_003120767 |
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| Protein GI | 256420114 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA ACCTATCAAA CAAGGTCCGT ATCGTAACGG CAGCCTCTCT TTTTGACGGA
CACGATGCAG CCATTAATAT TATGCGCCGC ATTATGCAGG CAAAAGGCGC GGAAGTGATC
CATCTGGGCC ACAACCGTTC GGCAGCGGAA ATTGTGGACT GTGCCATCCA GGAAGATGCC
CAGGGTATTG CCATTACCTC TTACCAGGGT GGACACCTTG AATTTTTCAA GTACATGTAT
GACCTCCTCC GGGAAAAAGG ATGCGGTCAC ATTAAAATAT TTGGCGGTGG CGGAGGTACC
ATCCTCCCTT CCGAAATAGC AGAACTACAT CAATACGGTA TTACCCGGCT TTACTCTCCT
GACGATGGCC GCCAGATGGG ACTGGAAGGA ATGATTGAAG ATGTGATTAA ACAATGCGAC
TTTACCACTA CCAAAGGACT GAACGGCCAT TTACAGGAAC TGCCTTCCCG CAATGATAAA
CTGATTGCCC AGGCCATTAC CGTAGCGGAA AATGATCAGT TGCCCGATGC GCTTCCCTCT
GCAAAAACAG GGGCTGGCGT CGTTTTAGGG ATCACCGGTA CCGGCGGGGC CGGTAAAAGT
AGTGTGACAG ATGAAATAGT ACGCCGCTTC CTCCGCAGTT TCGATCAGCA GACCATTGCC
GTTATTTCTG TGGATCCTTC CAAGAAAAAA ACCGGTGGCG CCCTCCTCGG AGACCGTATC
CGTATGAATG CGATCCACCA TCCCCGGGCC TATATGCGCT CCCTGGCTAC CAGGGAAAGC
GATAAAGCCG TCAGCGCACA CGTACAGGAA GCGATCGATA TCTGTAAAAC AGCCGGTTTT
GACTTGATCA TACTGGAAAC TTCCGGCATC GGCCAGAGCG ATACCGCCAT TACTGATCAC
TGTGACGTGG CCCTCTATGT GATGACGCCA GAATATGGCG CTGCTTCTCA GCTGGAAAAG
ATCAATATGC TGGATTATGC AGACGTCATC GCTATCAACA AGTTTGATAA AGCAGGCGCC
CTGGATGCAC TCCATGACGT ACGCAAACAA TTTAAACGCA ATCATAGCCT CTGGACCGCT
ACCGACGATC AATTACCGGT TATCGGCACA ATCGCATCCC AGTTCAACGA CCATGGCATT
AACCAGCTGT TTGAAAAATT GCTGGCGGTG ATCGATGAGA AAAAAGCCGT CCGTTTCGGT
AATGTAACAC ATGAAACAAC AGACGCGACT ACCACCAAAT CGCAGATCAT TCCGCCCTCC
CGGGTACGTT ATCTGGCGGA AATCAATGAA AGCATCCGCG ATTATGGAAA GTGGGTAGAC
GAACAATGCA ATATTGCCAC CCGTCTGTAT CAATTAGAGG GAGCCGCTTC CCTGTTGAAT
GAGGGTCAGC AGAAAACCAT AAAAGATATT GCCGATCACC TGCGCACCCA GCTGCACCCT
GAATGCCAGC AATTACTGGG CAACTGGCCG GCGCTGAAAA AACAATATAC GGCTCCTTTC
TACGAATTCC AGGTAAGAGA TAAAGTAATC AAACTTCCGC TTTACAGCGA AAGTCTTTCA
AAGTCTTCAA TACCCAAAAT CAGTTTATCG AGATATAACG ACTGGGGTGA TATCCTCCGC
TGGCAACTGA CCGAAAATCT GCCAGGTGAG TTTCCTTATG CGGCAGGTGT ATTCCCACTG
AAAAGAGAAG GAGAAGATCC TACCCGTATG TTTGCTGGTG AAGGCGGGCC GGAACGTACC
AATAAACGCT TCCACTACGT ATCCGTCGAT CAGCCGGCTA AGCGCCTCAG TACTGCATTT
GACAGTGTAA CCCTGTATGG AGAAGATCCT GCACACCGCC CGGATATTTA CGGAAAGGTA
GGTAACTCAG GGGTCAGCAT TGCCACTGTG GATGATGCTA AAAAGCTGTA TAGCGGTTTC
GATCTCTGCG ATCCGAAGAC ATCTGTGTCT ATGACTATTA ATGGTCCGGC GCCGATACTA
CTCGCCTTCT TCATGAATGC CGCCATTGAT CAGCAGTGTG AAAAATATAT TGCTGCGAAT
GGTCTGACTG ATAAAGTGAA TGCCCTGATC AAAGCAAAGT TCAGCGATAA TCCGCTACCC
CATTACAACG GAGATCTGCC TCATGGCAAT GATGGTCTGG GGTTAAAGTT GTTAGGGATT
TCCGGTGATG AAGTACTGGA AAAAGAAGTC TATGAAAAGA TAAAGGCACA TGCATTATCC
ACTGCGCGAG GTACCGTGCA GGCCGATATT CTGAAGGAAG ATCAGGCACA GAATACCTGT
ATTTTCTCCA CTGAATTTGC ACTGAAACTG ATGGGGGACG TGCAGGAATA TTTTATCAGT
CAGAAAGTAC GCAACTTCTA CTCTGTGAGC ATTTCGGGTT ATCATATTGC AGAAGCAGGC
GCTAATCCTA TTACGCAGCT GGCCTTTACA TTGTCGAATG GTTTTACCTA TGTAGAGTAT
TACCTGAGTC GCGGTATGCA TATCGACGAC TTTGCGCCTA ATCTCTCGTT CTTCTTCAGC
AATGGTATGG ACCCTGAATA TGCGGTGATA GGTCGTGTAG CACGCAGGAT CTGGGCTAAA
GCGATTAAAT ACAAATACAA AGGCAACGAC CGTTCGCAGA AACTAAAATA TCATATTCAG
ACTTCCGGCC GTAGTCTGCA CGCACAGGAA ATTGACTTCA ACGATATCCG CACCACCTTA
CAGGCATTAT ACGCCATTTA CGATAACTGT AATTCATTAC ATACAAACGC CTATGACGAG
GCCATTACCA CGCCTACAGA AGAAAGCGTG CGCAGGGCAA TGGCTATTCA GCTGATCATC
AACCGGGAAT TAGGTACTGC GAAAAATGAA AATCCGACAC AGGGATCTTT CTTTATCGAA
GAACTGACTG ACCTGGTAGA AGAAGCTGTA ATGGCCGAAT TCCAGCGTAT TACGGAAAGA
GGCGGCGTAT TGGGAGCGAT GGAAAGAATG TATCAGCGTA ACAAGATCCA GGAGGAAAGT
CTGCATTATG AATCGCTCAA ACATACCGGC GAATATCCGA TTGTCGGTGT GAATACATTC
CTGAATAAGA AAGGCTCTCC GACAGTTATT CCGGAAGAGG TGATCCGTTC CACACAGGAA
GAAAAAGAGT TCCAGATCAA TACGCTGACC GCCTTCCATC AGCGACATCA TCACCGCAGC
ACTGCTGCAT TACAACAACT TCAGCAGGTG GCGATCAACA ATGGTAACCT CTTTGAAGAA
TTAATGGAAA CCGTTAAACA TTGCTCTCTC GGACAAATTA CACATGCACT TTATGAAGTA
GGTGGCCAGT ACAGAAGGAA TATGTAA
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| Protein sequence | MTDNLSNKVR IVTAASLFDG HDAAINIMRR IMQAKGAEVI HLGHNRSAAE IVDCAIQEDA
QGIAITSYQG GHLEFFKYMY DLLREKGCGH IKIFGGGGGT ILPSEIAELH QYGITRLYSP
DDGRQMGLEG MIEDVIKQCD FTTTKGLNGH LQELPSRNDK LIAQAITVAE NDQLPDALPS
AKTGAGVVLG ITGTGGAGKS SVTDEIVRRF LRSFDQQTIA VISVDPSKKK TGGALLGDRI
RMNAIHHPRA YMRSLATRES DKAVSAHVQE AIDICKTAGF DLIILETSGI GQSDTAITDH
CDVALYVMTP EYGAASQLEK INMLDYADVI AINKFDKAGA LDALHDVRKQ FKRNHSLWTA
TDDQLPVIGT IASQFNDHGI NQLFEKLLAV IDEKKAVRFG NVTHETTDAT TTKSQIIPPS
RVRYLAEINE SIRDYGKWVD EQCNIATRLY QLEGAASLLN EGQQKTIKDI ADHLRTQLHP
ECQQLLGNWP ALKKQYTAPF YEFQVRDKVI KLPLYSESLS KSSIPKISLS RYNDWGDILR
WQLTENLPGE FPYAAGVFPL KREGEDPTRM FAGEGGPERT NKRFHYVSVD QPAKRLSTAF
DSVTLYGEDP AHRPDIYGKV GNSGVSIATV DDAKKLYSGF DLCDPKTSVS MTINGPAPIL
LAFFMNAAID QQCEKYIAAN GLTDKVNALI KAKFSDNPLP HYNGDLPHGN DGLGLKLLGI
SGDEVLEKEV YEKIKAHALS TARGTVQADI LKEDQAQNTC IFSTEFALKL MGDVQEYFIS
QKVRNFYSVS ISGYHIAEAG ANPITQLAFT LSNGFTYVEY YLSRGMHIDD FAPNLSFFFS
NGMDPEYAVI GRVARRIWAK AIKYKYKGND RSQKLKYHIQ TSGRSLHAQE IDFNDIRTTL
QALYAIYDNC NSLHTNAYDE AITTPTEESV RRAMAIQLII NRELGTAKNE NPTQGSFFIE
ELTDLVEEAV MAEFQRITER GGVLGAMERM YQRNKIQEES LHYESLKHTG EYPIVGVNTF
LNKKGSPTVI PEEVIRSTQE EKEFQINTLT AFHQRHHHRS TAALQQLQQV AINNGNLFEE
LMETVKHCSL GQITHALYEV GGQYRRNM
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