Gene CA2559_06870 details

Gene Information

• Locus tag: CA2559_06870
• ID: 9296870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 1530469
• End bp: 1533888
• Gene Length: 3420 bp
• Protein Length: 1139 aa
• Translation table: 11
• GC content: 37%
• Product: methylmalonyl-CoA mutase
• Protein accession: YP_003716133
• Protein GI: 298207954

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAAG TAGCACCTTA CAAACCAACA TATAAAGTTA GAATAGTAAC AGCAGCATCA 
TTATTTGATG GTCATGACGC CGCAATAAAT ATTATGCGAC GCATCATACA ATCTACAGGT 
GTAGAGGTTA TTCACCTAGG TCATGACCGT AGTGTAGAAG AAGTGGTTAA TACTGCCATA 
CAAGAAGATG CCAATGCTAT TGCTATGACA TCTTATCAAG GTGGTCATAA CGAGTACTTT 
AAGTATATGT ATGATTTGCT TCAGGAAAAA GGCGCTGGTC ACATCAAGAT CTTTGGTGGT 
GGCGGTGGTG TTATCCTTCC AGAAGAAATT AAGGAGTTAA TGGATTATGG GATTACCAGA 
ATCTATTCGC CAGACGATGG TCGTGAGCTT GGCCTACAAG GTATGATTAA CGATTTGGTA 
AAAACTTCAG ATTTTCCAAT AGGTAAAACG TTAAATGGTG AATTAAAAGA ATTACCAAAT 
AAATCGCCTA ACGCTATAGC ACGAGTTATT TCGGCTGCTG AAAACTTTCC AGAAGTAGCT 
AAAGACACTT TAGACGAAAT ACATAAGAAA AATGAAAAAA GTACAACACC TGTTTTAGGT 
ATTACCGGTA CTGGTGGAGC AGGAAAATCG TCTTTAGTAG ATGAGTTAGT ACGTCGTTTT 
TTGGTAGATT TTCCAGAGAA AACCATAGGG TTAATCTCTG TAGATCCTTC TAAACGTAAA 
ACTGGTGGTG CATTGCTAGG AGATCGTATT CGTATGAATG CCATAAACTC TCCACGTGTA 
TATATGCGTA GCTTGGCAAC ACGCCAAAGT AACTTGGCCT TATCTAAATA TGTAAATGAA 
GCTGTTGAAG TTTTAAAAGC AGCAGAGTAT GATATTATTA TTCTTGAAAC TTCTGGTATT 
GGCCAAAGCG ATACAGAAAT TATTGAGCAT AGTGATGTAT CTCTTTATGT TATGACACCA 
GAGTTTGGTG CAGCAACACA GCTGGAAAAG ATAGATATGT TAGATTTTGC CGACTTGGTA 
GCTATTAATA AGTTTGACAA GCGTGGTGCT TTAGATGCCT TACGCGATGT TAAAAAACAA 
TTTATGCGCA ACCACCAATT ATGGGATGTG CACCAAGACG ATTTACCAGT TTACGGTACA 
ATTGCCTCTC AGTTTAACGA TCCAGGAATG AATACGCTTT ATAAAGCGAT TATGGATAAG 
GTTGTAGAGC GCACAGGAGC AGAGTTGTCT TCTAACTTCG AGATAAGTAA GGAGATGAGT 
GAGAAGATAT TTGTAATTCC GCCAGCTCGT ACACGTTACC TTTCAGAAAT TGCTGAAAAT 
AATCGTGGTT ACGACACTAC TGCAGCAGCA CAAGTTGAAG TTGCTCAACG TTTATACGGT 
ATCTTTAAAA CAGTTGAGTC TGTTACAGGA ACCTCACCAA ACTTAACTAA AGCAGGTTTA 
GAGGTAACTG AAGAACCTTC AGAAAACAAA GAACTTTTAA AATTACTTAT AGCAGAATTT 
GACCGTGTTA AAATGGATCT AGATCCATAC AACTGGGAAG TTATAACAGG TTGGAGTGAA 
AAAGTAGATC GCTATAAAAA CCCTATCTAT TCATTTAAGG TAAGAGATAA GGAAATAAAG 
ATTGAGACAC ATACTGAGTC TTTATCACAC ACGCAAATAC CTAAAGTGGC CTTACCAAAA 
TACCAAGCTT GGGGCGATAT CTTAAAATGG GTATTACAAG AAAATGTACC AGGAGAATTT 
CCGTACACTG CAGGATTATA TCCATTTAAA CGAACAGGCG AAGATCCAGC ACGTATGTTT 
GCCGGAGAAG GTGGTCCAGA ACGTACCAAC CGTAGGTTTC ACTATGTGAG TATGGGCTTG 
CCAGCAAAAC GTTTATCTAC CGCGTTTGAT AGTGTTACAC TTTATGGTAA CGATCCAGGA 
CACAGACCAG ATATTTATGG TAAAATAGGA AACGCAGGTG TAAGTATATG TTGTTTAGAC 
GATGCTAAGA AATTATATTC AGGATTCGAT TTAAGTCATC CACTAACATC GGTAAGTATG 
ACCATTAATG GTCCTGCACC AATGCTGTTA GGCTTCTTTA TGAATGCAGC AATAGATCAA 
AATTGTGAGA AATACATAAA AGAGCACGGC TTAGAAAGTG AAGTAGAAGA AAAGATTAAT 
GCTATTTATA GTGAAAATGG TTTAACACGC CCAACGTATC AAGGTGAGTT GCCAGAAACT 
AATAATGGTT TAGGGTTAAT GTTATTAGGA GTAACAGGAG ACCAAGTATT ACCTAAAGAT 
GTGTACCAAG ACATAAAGGT AAATACCTTA AAACAAGTTC GTGGTACCGT ACAAGCAGAT 
ATATTAAAAG AAGATCAAGC GCAAAATACG TGTATTTTCT CAACTGAATT TGCATTGCGT 
TTAATGGGAG ATGTACAAGA GTATTTTATA GAAAAACAAG TGCGCAACTT CTATTCAGTT 
TCTATAAGTG GTTATCATAT TGCTGAAGCA GGTGCCAACC CAATAACACA GTTGGCTTTA 
ACCTTGGCAA ATGGTTTTAC TTATGTAGAG TACTACCTGT CTAGAGGAAT GGATATTAAT 
AAATTTGGAC CTAACCTATC CTTTTTCTTT AGTAACGGTA TAGATCCAGA ATATGCAGTA 
ATAGGTCGTG TGGCACGTAA AATTTGGTCT AAAGCCTTAA AACATAAATA CGGAGCCAAT 
CCTAGAGCAC AGATGTTAAA GTACCACATA CAAACATCTG GACGTAGTTT ACACGCTCAG 
GAAATTGACT TTAATGATAT ACGTACAACA TTACAAGCCT TGTATGCTAT TTATGATAAC 
TGTAACTCAT TGCATACAAA TGCGTATGAT GAAGCTATTA CCACACCAAC AGAAGAATCT 
GTAAGACGTG CAATGGCTAT ACAGTTAATT ATTAATAAGG AATTAGGACT AGCTAAAAAC 
GAAAACCCGA TACAAGGCGC TTTTATTATT GAAGAGCTTA CAGACTTGGT AGAAGAAGCC 
GTATTGCAGG AATTTGATCG TATTACAGAA CGTGGTGGCG TTCTTGGTGC TATGGAAACT 
ATGTACCAAC GTAGCAAGAT ACAGGAAGAG AGCTTGTATT ATGAAACCTT AAAGCATAAT 
GGCGATTTCC CTATAATTGG CGTTAATACA TTCTTGAGTA GTACAGGATC ACCAACTGTA 
CAACCTGCAG AAGTTATAAG AGCTACAGAA ACAGAGAAGC AACACCAAAT TGCAACATTA 
GAGAATCTTC ATAAAACCTA TGAAGATAGG ATAGAGGATA CTCTAAAATC GTTACAACAC 
GCAGCAATAC AAAATGAAAA TATGTTTGAT GTCCTTATGG AAGCGACTAA AGTTTGTTCT 
TTAGGGCAAA TAACAGAAAG CTTATTTGAA GTTGGTGGCC AGTACAGACG TAATATGTAA 

 

Protein sequence

MEQVAPYKPT YKVRIVTAAS LFDGHDAAIN IMRRIIQSTG VEVIHLGHDR SVEEVVNTAI 
QEDANAIAMT SYQGGHNEYF KYMYDLLQEK GAGHIKIFGG GGGVILPEEI KELMDYGITR 
IYSPDDGREL GLQGMINDLV KTSDFPIGKT LNGELKELPN KSPNAIARVI SAAENFPEVA 
KDTLDEIHKK NEKSTTPVLG ITGTGGAGKS SLVDELVRRF LVDFPEKTIG LISVDPSKRK 
TGGALLGDRI RMNAINSPRV YMRSLATRQS NLALSKYVNE AVEVLKAAEY DIIILETSGI 
GQSDTEIIEH SDVSLYVMTP EFGAATQLEK IDMLDFADLV AINKFDKRGA LDALRDVKKQ 
FMRNHQLWDV HQDDLPVYGT IASQFNDPGM NTLYKAIMDK VVERTGAELS SNFEISKEMS 
EKIFVIPPAR TRYLSEIAEN NRGYDTTAAA QVEVAQRLYG IFKTVESVTG TSPNLTKAGL 
EVTEEPSENK ELLKLLIAEF DRVKMDLDPY NWEVITGWSE KVDRYKNPIY SFKVRDKEIK 
IETHTESLSH TQIPKVALPK YQAWGDILKW VLQENVPGEF PYTAGLYPFK RTGEDPARMF 
AGEGGPERTN RRFHYVSMGL PAKRLSTAFD SVTLYGNDPG HRPDIYGKIG NAGVSICCLD 
DAKKLYSGFD LSHPLTSVSM TINGPAPMLL GFFMNAAIDQ NCEKYIKEHG LESEVEEKIN 
AIYSENGLTR PTYQGELPET NNGLGLMLLG VTGDQVLPKD VYQDIKVNTL KQVRGTVQAD 
ILKEDQAQNT CIFSTEFALR LMGDVQEYFI EKQVRNFYSV SISGYHIAEA GANPITQLAL 
TLANGFTYVE YYLSRGMDIN KFGPNLSFFF SNGIDPEYAV IGRVARKIWS KALKHKYGAN 
PRAQMLKYHI QTSGRSLHAQ EIDFNDIRTT LQALYAIYDN CNSLHTNAYD EAITTPTEES 
VRRAMAIQLI INKELGLAKN ENPIQGAFII EELTDLVEEA VLQEFDRITE RGGVLGAMET 
MYQRSKIQEE SLYYETLKHN GDFPIIGVNT FLSSTGSPTV QPAEVIRATE TEKQHQIATL 
ENLHKTYEDR IEDTLKSLQH AAIQNENMFD VLMEATKVCS LGQITESLFE VGGQYRRNM