| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1164 |
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| Symbol | |
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| ID | 8252262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1374974 |
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| End bp | 1378369 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934819 |
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| Product | Methylmalonyl-CoA mutase |
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| Protein accession | YP_003091444 |
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| Protein GI | 255531072 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAA TTGAAATCTA TAAACCCAAA CATAAAATCC GTTTTGTTAC CGCTGCTGCA
CTTTTCGATG GTCATGATGC CACCATCAAC ATCATGCGCC GCATCCTGCA GTCCTCGGGT
GCCGAAGTCA TCCACTTGGG CCACAACCGT TCTGTAGAAG AGGTAGTAAA CTGTGCAATT
CAGGAAGATG TGCAGGGAAT AGCCATGACG TCCTATCAGG GTGGGCATAT TGAATATTTT
AAGTATATGT ACGACCTGCT GCAGGAACGC GGGGCCACAC ATATCAAAAT ATTTGGTGGC
GGAGGCGGGG TCATCCTTCC ATCAGAAATT GCAGAACTGC AGGCTTACGG AATCACCAGG
ATCTACTCTC CGGATGACGG CCGCAAAATG GGCCTGCAGG GCATGATCAA TAACATGCTG
GAACAAACAG ACTATATTAC AACCAAATCA CTGAACGGGG AACTCAAATC CATCCCAGAG
AAAGAAATAA AAAGTATTGC TGCTGCAATT ACGGTAGCAG AAAACGATCC CGAAGCAGCA
CAACAATTTG TAAATGAACT CAAAAAACTA ACCCTGGCCA ACCAGGCACC CGTTTTGGGC
ATAACAGGCA CAGGTGGTTC AGGTAAATCA TCCCTTGTCG ATGAACTGGT GAGGCGATTC
CTCATCGAAG TAAAAGATAA AACCCTGGCT ATCATATCAG TTGATCCTTC CAAACGCAAG
ACAGGCGGCG CCTTGCTGGG CGACAGGATC CGCATGAATG CCATCAATAG CCCCAGGGTA
TATATGCGTT CCCTGGCCAC CAGGCAGGCC AATCTGGCCC TGTCCAAAAA TGTACAGGAG
AGTATAGACA TCTGTAAGGC TGCCGGATAT GACCTCATTA TTGTCGAAAC CTCGGGCATC
GGCCAGTCAG ACACCGAAAT TACCGAGCAT TGCGATGTAT CCCTCTATGT GATGACTCCT
GAATTTGGAG CTGCCACCCA GCTGGAAAAG ATCGATATGC TTGATTTTGC AGACCTCGTT
GCCATCAATA AATTTGATAA AAGAGGTGCC CCAGATGCAT TAAGAGATGT TCGTAAGCAG
TACAAACGCA ATCATAACCT CTTTGATGCC CCCGATGAAA GCATCCCGGT ATTTGGTACC
ATGGCCTCAC AATTCAACGA TCCGGGCATG AACAACCTTT TCAGTGCGCT GATCAGTAAA
ATCCAGGAAA AAACAGGGCT TAAATTCGAT GCCCGCATGG AGCTTACAAC CGAACAATCA
GAAAAGATCT ACATCATTCC GCCAGACAGG ATCAGGTACC TTGCCGAAAT TGCTGAGGCC
AGCCAGAGTT ATAATGAATG GGTAGACAAA CAAAGCGGTA TTGCACGTAA ACTATACCAG
CTACAAGGTG TAATTCAGCT CGCAGAAGAA GAAAGTACAA TAACAGCAGC TCTACCAAAC
AGTAAAAACA TTACAGGGGC GCTACAGGAA GTATACAAAC ACCTGGAAGA ACAACTGGAC
GGGGAATGCC GTCGTTTACT GCGCCAATGG CCGGAAACCA GGTTAAAATA CAAGCAAAAA
GATTTTATCT ATAAAGTAAG GGATAAGGAA ATTAAGCAAC CTTTATTTTA TGAATCCTTG
TCCAAACTCC AGATCCCCAA AGTCTCCCTG CCCAGGTATG AAGACTGGGG AGATATCCTA
CGCTGGTTGT TAACAGAAAA TGTACCCGGA GAATTTCCTT ACGCTGCAGG TGTGTTCCCT
TTAAAAAGGG AGGGTGAAGA CCCAACCAGG ATGTTTGCCG GAGAAGGCGG GCCTGAAAGA
ACCAACAAAA GATTCCATTA TGTATCCCTG GGCCAGCCCG CACACCGCCT GTCTACTGCT
TTCGACTCCG TTACCTTATA TGGAGAAGAT CCGCACATCC GGCCCGATAT CTATGGAAAA
ATAGGCAACT CCGGGGTCAG TATCGCCACT ATAGACGATG CAAAAAAACT CTACTCAGGT
TTTGATCTCT GTGCGGCTTC TACATCAGTA TCTATGACCA TCAATGGCCC GGCCCCTATG
CTGCTCGGCT TTTTTATGAA TGCGGCAATA GACCAGCAAT GCGAGAAATA CATTGTAGCA
CATGGATTAC AAAAAGAAGT TGAAGCCAAG ATAAAAGCTA TCTATAAAAC CATTGGACAG
GAAAGACCAG TTTACAGTGG TAACCTGCCC GAGGGAAATA ACGGACTGGG CCTAATGCTG
TTAGGTGTTA CCGGCGACCA GGTATTGCCT GCTGAAGTGT ATGCTAAAAT AAGGAGCCAT
GCCATCAGCA CCGTTCGCGG AACCGTTCAG GCCGATATCC TGAAAGAAGA CCAGGCACAA
AACACCTGTA TCTTCTCTAC AGAATTTGCC TTAAGGATGA TGGGCGATAT CCAAAGCTAT
TTCATCAGCG AAAAGGTCCG CAATTTTTAT TCTGTATCCA TATCGGGCTA TCACATTGCC
GAAGCAGGGG CCAATCCCAT TTCGCAACTG GCATTTACCT TAAGCAATGG CTTTACTTTT
GTTGAATATT ACCTCAGCAG GGGAATGAAC ATTGATGATT TTGCGCCCAA CCTGTCCTTT
TTCTTTTCTA ATGGTATCGA TCCGGAATAT TCTGTAATAG GGCGTGTAGC ACGCCGCATC
TGGGCCAAAG CCATTAAAAA CAAATACAAA GGGAACGACA GGTCGCAGAA ACTGAAATAC
CACATTCAAA CCTCCGGCCG TTCCTTACAC GCCCAGGAAA TTGATTTCAA TGATATCCGT
ACCACATTGC AGGCGCTTTA TGCCATATAC GACAATTGCA ATTCCCTGCA TACCAATGCT
TATGATGAAG CCATTACCAC ACCAACAGAA GAATCTGTAC GCCGGGCTAT GGCCATTCAG
CTCATCATCA ACAGGGAGCT TGGCCTGGCT AAAAATGAGA ATCCCCTACA GGGTGCCTTC
ATTATAGAAG ACCTTACTGA TCTGGTAGAA GAGGCCGTAT TGCAGGAATT TAAACGCATT
AATGACAGGG GCGGAGTATT GGGTGCCATG GAAACCATGT ACCAGCGTAG CAGAATACAG
GAAGAGAGCT TATATTATGA AACTTTAAAA CATACAGGCG AATACCCTAT AGTTGGGGTA
AACACCTTTC TGAATAAAAA TGGCTCCCCT ACCATCATAC CTGGCGAAGT GATTCGGGCT
ACGGAAGAAG AAAAACAATA TCAGATCAAC ACACTTCAGG CCTTTCAGAC CAGAAATGCG
GATAAAGCCG GAACAGCTTT AAAGAACCTT CAAAAATCGG CTATAGCTGG CAACAATATT
TTTGAGCAAC TTATGGAAGT ATGTAAAATA TGCTCATTAG GGCAGATATC AAATGCGCTA
TACGAAGTTG GCGGGCAATA CCGCAGAAAC ATGTGA
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| Protein sequence | MEQIEIYKPK HKIRFVTAAA LFDGHDATIN IMRRILQSSG AEVIHLGHNR SVEEVVNCAI
QEDVQGIAMT SYQGGHIEYF KYMYDLLQER GATHIKIFGG GGGVILPSEI AELQAYGITR
IYSPDDGRKM GLQGMINNML EQTDYITTKS LNGELKSIPE KEIKSIAAAI TVAENDPEAA
QQFVNELKKL TLANQAPVLG ITGTGGSGKS SLVDELVRRF LIEVKDKTLA IISVDPSKRK
TGGALLGDRI RMNAINSPRV YMRSLATRQA NLALSKNVQE SIDICKAAGY DLIIVETSGI
GQSDTEITEH CDVSLYVMTP EFGAATQLEK IDMLDFADLV AINKFDKRGA PDALRDVRKQ
YKRNHNLFDA PDESIPVFGT MASQFNDPGM NNLFSALISK IQEKTGLKFD ARMELTTEQS
EKIYIIPPDR IRYLAEIAEA SQSYNEWVDK QSGIARKLYQ LQGVIQLAEE ESTITAALPN
SKNITGALQE VYKHLEEQLD GECRRLLRQW PETRLKYKQK DFIYKVRDKE IKQPLFYESL
SKLQIPKVSL PRYEDWGDIL RWLLTENVPG EFPYAAGVFP LKREGEDPTR MFAGEGGPER
TNKRFHYVSL GQPAHRLSTA FDSVTLYGED PHIRPDIYGK IGNSGVSIAT IDDAKKLYSG
FDLCAASTSV SMTINGPAPM LLGFFMNAAI DQQCEKYIVA HGLQKEVEAK IKAIYKTIGQ
ERPVYSGNLP EGNNGLGLML LGVTGDQVLP AEVYAKIRSH AISTVRGTVQ ADILKEDQAQ
NTCIFSTEFA LRMMGDIQSY FISEKVRNFY SVSISGYHIA EAGANPISQL AFTLSNGFTF
VEYYLSRGMN IDDFAPNLSF FFSNGIDPEY SVIGRVARRI WAKAIKNKYK GNDRSQKLKY
HIQTSGRSLH AQEIDFNDIR TTLQALYAIY DNCNSLHTNA YDEAITTPTE ESVRRAMAIQ
LIINRELGLA KNENPLQGAF IIEDLTDLVE EAVLQEFKRI NDRGGVLGAM ETMYQRSRIQ
EESLYYETLK HTGEYPIVGV NTFLNKNGSP TIIPGEVIRA TEEEKQYQIN TLQAFQTRNA
DKAGTALKNL QKSAIAGNNI FEQLMEVCKI CSLGQISNAL YEVGGQYRRN M
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