| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0156 |
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| Symbol | |
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| ID | 6241658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 174860 |
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| End bp | 178243 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642591918 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001856395 |
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| Protein GI | 186474925 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.308187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TTTCCACGCC GCAGCGCATC GGTGACGACG CGCACGCTTC ACACTCTTCC
ACGCCGCGTG CGCCCGGCGC GCAGTCGTCA CGGCGTTTGC GTTTCGTCAC TGCCGCGGCG
CTGTTCGACG GCCACGACGC ATCGATCAAC ATCATCCGGC GCATTCTGCA GGCGAGCGGC
GTCGAGGTGA TCCATCTCGG GCACAACCGT GCCGTCGAGG AAGTGGCGAC AGCCGCGTTG
CAGGAGGATG CGGACGGCAT CGCGGTGTCG AGCTATCAGG GCGGACACAT CGAATACTTC
CGCTATCTGG TCGATCTGTT GCGCGAGCGC GGCGGCGCAG GAATCAAGGT ATTCGGCGGC
GGCGGCGGCG TGATCGTGCC CGACGAGATC GCGGCGTTGC AGCAGTACGG CGTCGAGCGC
ATCTATTCGC CGCACGATGG GCAACGGCTC GGGCTGCAAG GGATGATCGA CGACATGATC
GCGCGCTGCC GCGACGCGGC GCGACCGCGG CCGGACACGC CGCAGCCGTC TAAGCTGGTT
CGCGATCTGA AGGACGCGCT GCGCGGCGAT GCCGATGGCG TCGCGCGTCT CGCCGCATTC
CGCGAGCTCG CCCGATTGAT CACGTCGCTT GAAACGGGAG ACCTGGATCC TGCCATTCGC
GCGGAACTCG CTGCACGGGC GAAGCAGGCG AACGTGCCCG TGCTCGGCAT CACAGGGACG
GGCGGCGCAG GCAAGTCGTC GCTGTCGGAT GAACTGATCC GCCGGTTCCG TCTCGACTAC
GGCGATGCGA TGACGATCGC CGTCATCGCG ATCGATCCGT CGCGCCGCAA GTCGGGCGGC
GCGCTGCTCG GCGATCGCAT CCGCATGAAC GCGATCGGCG ACTGGGGCGA TGGCGCGCGC
GTGTTCATGC GCTCGCTGGC GACACGCGAC GCATCGAGCG AAATCTCCGA TGCGCTACCC
GATACGATCA ATGCCTGCAA GATGACGGGT TTCGATCTGA TCGTAGTCGA GACGTCGGGC
ATCGGTCAGG GCGACGCGGC CATCGTGCCG CACGCCGACA CGTCGCTGTA CGTGATGACG
CCCGAATTCG GCGCGGCGAG CCAGCTCGAG AAGATCGACA TGCTCGACTT CGCGGATTTC
GTCGCGATCA ATAAATTCGA CCGTAAGGGT GCTGCCGACG CGCTGCGTGA CGTTGCGAAA
CAGGTTCAGC GTAACCAGCA GAAGTTTGCG GCGAAGATCG ATGAAATGCC GGTGTTCGGT
ACGATTGCGT CGCGATTCAA TGACGATGGC GTAACTGCTG TGTACCAACA TATCGCTGCG
GCATTGCGCA GCCACGGCCT GCGCGAAAGC GAAGCGCGCT TGCCGAAGCT GGAAGGTCTG
CGGCACTCGA GCGGCCGCAA CGCGATCGTG CCGCCCGAGC GCGTGCGGTA TCTGTCGGAT
GTTGCGCTGA TGGTGCGTGC GTATCGCGAA CGTGCCGACA AGCAGTCGCA GCTCGCGCGT
GAGCGCTGGC AACTCGACGA AGCGCGGCGC ATGTTGAATG ACGCGAGCGG CAATGTGGCG
GACGCGGCCG CTTTCGACTC ACTGATCGAC GCCCGCACGT CGCAGCTGGG CGAGCGCGAA
AAGGCGCTGC TCGAAGCGTG GCCAAAGACG GTTGCCGCTT ACTCCGGCGA CGAGCATGTG
GTGAAGATCC GCGGCAACGA AATCCGTACC GCGCTCACCG TCGAAACCCT GTCGGGTTCG
AGGATCCGCA AGGTCGCGCT GCCGGCATAC AAGGATCCCG GCGAAATCCT GCGCTGGCTG
ATGCTCGACA ATCTGCCGGG CTACTTCCCG TTCACGGCTG GCGTGTTTCC GTTCCGCCGC
GAGAACGAAG ACCCGACGCG CATGTTCGCG GGCGAGGGCG ATCCGTTCCG CACCAACCGG
CGTTTCAAGT TGCTGTCCGA CGGTGTGCCT GCGAAGCGTC TGTCGACGGC ATTCGATTCC
GTCACGCTCT ACGGCGAAGA ACCGAACGAG CGGCCGGATA TTTACGGCAA GGTCGGCAAT
TCGGGCGTAT CGGTGGCAAC GCTCGACGAC ATGAAGGCAC TCTACGACGG CTTCGACCTG
TGCGCGCCCG AGACGTCGGT GTCGATGACG ATCAACGGTC CCGCGCCGAC CATACTCGCG
ATGTTCTTCA ACGTTGCGAT CGATCAGCAG ATCGCGCTCG CGCACGCGAA AGCGCAGCAG
CAAGGGCGAG CGCCTTCGCA TGACGAACTC GATGCCGCGC GCCGTTTCGC GCTCGAAAAC
GTGCGCGGTA CGGTGCAGGC TGACATCCTC AAGGAAGATC AAGGGCAGAA CACCTGCATC
TTCTCGACGG AGTTCAGCCT GAAGGTGATG GGCGACATTC AGGCGTACTT CGTCGAGCAC
GGCGTGCGCA ATTTTTATTC GGTGTCGATT TCCGGCTATC ACATCGCCGA GGCGGGCGCG
AATCCGATTT CTCAGCTCGC GTACACGCTC GCGAACGGAT TCACGTATGT CGAAGCGTAT
CTCGCGCGCG GCATGGACAT CGACGACTTT GCGCCGAATC TGTCGTTCTT TTTCTCGAAC
GGCATGGACC CGGAATACAC CGTGCTCGGC CGTGTCGCGC GGCGTATCTG GGCCGTTGCA
ATGCGCGAGC GTTACGGCGC CAACGAGCGC AGCCAGAAGC TGAAGTATCA CGTGCAGACA
TCGGGCCGTA GCCTGCACGC GCAGGAAATC GACTTCAACG ATATCCGCAC GACGCTGCAG
GCGCTGATTG CGATCTACGA CAACTGCAAT TCGCTGCATA CGAACGCGTT CGACGAAGCG
ATCACGACGC CGACGGAGGA CTCGGTGCGC CGCGCGGTCG CGATCCAGCT GATCATCAAC
CGCGAATGGG GGCTCGCGAA GAACCAGAAT CCGAATCAGG GCAGCTTCGT CATCGATGAA
TTGACCGATC TCGTCGAGGC GGCGGTGCTG ACCGAGTTCG ACCGGCTGAC AGAGCGCGGC
GGTGTGCTCG GCGCGATGGA AACGGGCTAC CAGCGCGGCA GGATCCAGGA CGAGTCGATG
CTGTACGAGC ATCGCAAACA TGATGGCTCG TATCCGATCG TCGGCGTGAA CACGTTCCTC
GGCGCCCATG CGCACGATGC ACCGCCGCCT GTTGCTTTAG CGCGTTCGAC GGAAAACGAG
AAGCAGGGGC AACTCAAGCG CCTGCGCACA TTCCAGTCGC GCAATCAAAG CGACGCGCCG
GCCATGCTCG AACGACTGAA ACGTGCCGTC ATCGACGATC AGAACGTGTT CGCCGTGCTG
ATGGATGCGG TGCGAGTCTG TTCGCTCGGA CAGATCACGC ATGCGCTGTT CGAAGTGGGC
GGCCAGTATC GACGCAACAT GTGA
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| Protein sequence | MTDLSTPQRI GDDAHASHSS TPRAPGAQSS RRLRFVTAAA LFDGHDASIN IIRRILQASG
VEVIHLGHNR AVEEVATAAL QEDADGIAVS SYQGGHIEYF RYLVDLLRER GGAGIKVFGG
GGGVIVPDEI AALQQYGVER IYSPHDGQRL GLQGMIDDMI ARCRDAARPR PDTPQPSKLV
RDLKDALRGD ADGVARLAAF RELARLITSL ETGDLDPAIR AELAARAKQA NVPVLGITGT
GGAGKSSLSD ELIRRFRLDY GDAMTIAVIA IDPSRRKSGG ALLGDRIRMN AIGDWGDGAR
VFMRSLATRD ASSEISDALP DTINACKMTG FDLIVVETSG IGQGDAAIVP HADTSLYVMT
PEFGAASQLE KIDMLDFADF VAINKFDRKG AADALRDVAK QVQRNQQKFA AKIDEMPVFG
TIASRFNDDG VTAVYQHIAA ALRSHGLRES EARLPKLEGL RHSSGRNAIV PPERVRYLSD
VALMVRAYRE RADKQSQLAR ERWQLDEARR MLNDASGNVA DAAAFDSLID ARTSQLGERE
KALLEAWPKT VAAYSGDEHV VKIRGNEIRT ALTVETLSGS RIRKVALPAY KDPGEILRWL
MLDNLPGYFP FTAGVFPFRR ENEDPTRMFA GEGDPFRTNR RFKLLSDGVP AKRLSTAFDS
VTLYGEEPNE RPDIYGKVGN SGVSVATLDD MKALYDGFDL CAPETSVSMT INGPAPTILA
MFFNVAIDQQ IALAHAKAQQ QGRAPSHDEL DAARRFALEN VRGTVQADIL KEDQGQNTCI
FSTEFSLKVM GDIQAYFVEH GVRNFYSVSI SGYHIAEAGA NPISQLAYTL ANGFTYVEAY
LARGMDIDDF APNLSFFFSN GMDPEYTVLG RVARRIWAVA MRERYGANER SQKLKYHVQT
SGRSLHAQEI DFNDIRTTLQ ALIAIYDNCN SLHTNAFDEA ITTPTEDSVR RAVAIQLIIN
REWGLAKNQN PNQGSFVIDE LTDLVEAAVL TEFDRLTERG GVLGAMETGY QRGRIQDESM
LYEHRKHDGS YPIVGVNTFL GAHAHDAPPP VALARSTENE KQGQLKRLRT FQSRNQSDAP
AMLERLKRAV IDDQNVFAVL MDAVRVCSLG QITHALFEVG GQYRRNM
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