| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1768 |
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| Symbol | |
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| ID | 4958533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1934401 |
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| End bp | 1936083 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640180941 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001113118 |
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| Protein GI | 134299622 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0288235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTACTC AAGAATTGTT AAATCAATCA AGCCAATTAA GACAAAAATG GGAGGATGAA
GTTAAAAAAT CCGTTGCAAA ACATGCTGAC CAAAAAGAAA ATTGGACCAC AGTTTCTGAT
CTGGAAATAA AAAGAATTTA TGGCCCTGAG GACATTAAAA ATATGGATTT TGAGAAGGAT
ATCGCTTATC CGGGACAGTT TCCATATTTA AGAGGAAACC AGCCCACTGG GTACCGCGGA
AAGTATTGGA CCTTTAGAAT GTTTGCAGGT ATGGGCACGG CTGTTGAGAC TAATAAACGT
TGGCATTATC TATTAAAAAC CGGCCAGACC GGTCTGAGCA CTGCTTTTGA TTTCCCGACC
CTGATGGGTT ACGATACTGA CTCCCCCAAA GCTAAGGGTG AGTGTGGAAA ATGCGGCGTA
GCCATCGATA CAATTGAAGA TTTTAGAGAT CTTATTAATG GAATTCCTTT AGATAAGATA
ACTACATCTA TGACAATTAA TCCTCCTGCA ACTGTATTAT GGGCCATGTA CTGCGCATCT
GCTGAGCAGT TGGGAATTCC CCTTACCAAA ATTGGTGGTA CCATTCAAAA TGATATGTTA
AAAGAATTTA TTGCTCAGAA AACATTTATG TGTCCGCCTG AGCCATCAGT AAAACTAATC
AGTGATACTG TTGAATTTGG TACCAAATAC GTCCCTAAAT GGAATACCAT TAGCATAAGT
GGCTATCATA TCAGAGAAGC TGGGGCAACC GCTGTTCAGG AACTGGCATT CACATTAAGA
GATGGCATGG AATATGTTGA GGATGCTATT AGGCGTAAGG GGTTGCATGT TGATGAATTT
GCCCCTAGAT TATCTTTCTT CTTCAACTCA CATATTGATT TCTTTGAAGA AATCGCTAAA
TTAAGAGCTG CCCGACGGAT CTGGGCGAAG GCCATGCGGG ACCGTTACGG TTCTAAAGAT
CCGCGTTCCT GGTGGATGAG ATTTCATACC CAGACAGCCG GATGTTCACT AACTGCTCAG
CAACCATACA ACAATGTGGT TAGGACTGCT ACCGAGGCGT TGGCTGCGGT TCTTGGAGGA
ACTCAGTCAC TTCACACCAA TTCACTGGAT GAAGTTTTGT GCTTGCCTTC CGATCATGCT
GTACAAATTG CCTTAAGAAC ACAGCAGATT ATTGCTGAAG AAACCGGGGT TGTAAATACC
ATCGACCCAT TGGCCGGTTC ATATTTCGTG GAAGCACTTA CAAACGAAAT GGAAGAAAAG
GCTTGGGAAT ACATCCATAA GATTGATGAT ATGGGTGGCA TGATTGCTGC CATTGATAAA
GGATTCCCAC AGCTAGAGAT TTCAGATGCG GCATATAAAT TCCAGCAGCA AATAGATGCT
CAGGAAAAAG TCATGATCGG TGTTAATAAG TATGTGGAAG CCGATGAAAA AGTTGACATT
CCATTCTTGG AAATTGATGA CTCTGTAGAA ACAGAACAGT TAGAACGGCT TGCGGCAGTT
AAGAGGAAAC GTGACGGTCG TAGAGTAGCT GAAACACTAA AAGATCTTGA AAATGCCTGT
AAAAGAGGCG ACAATGTTAT GCCTTATTGT ATTGAAGCAG TTAAAAGTTT TGCAACTGTT
CAAGAAATTT GCGATGTTTA CAGAGAAGTT TTCGGTGAAT ATCGTGATCC TGGAATTTAC
TAA
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| Protein sequence | MFTQELLNQS SQLRQKWEDE VKKSVAKHAD QKENWTTVSD LEIKRIYGPE DIKNMDFEKD
IAYPGQFPYL RGNQPTGYRG KYWTFRMFAG MGTAVETNKR WHYLLKTGQT GLSTAFDFPT
LMGYDTDSPK AKGECGKCGV AIDTIEDFRD LINGIPLDKI TTSMTINPPA TVLWAMYCAS
AEQLGIPLTK IGGTIQNDML KEFIAQKTFM CPPEPSVKLI SDTVEFGTKY VPKWNTISIS
GYHIREAGAT AVQELAFTLR DGMEYVEDAI RRKGLHVDEF APRLSFFFNS HIDFFEEIAK
LRAARRIWAK AMRDRYGSKD PRSWWMRFHT QTAGCSLTAQ QPYNNVVRTA TEALAAVLGG
TQSLHTNSLD EVLCLPSDHA VQIALRTQQI IAEETGVVNT IDPLAGSYFV EALTNEMEEK
AWEYIHKIDD MGGMIAAIDK GFPQLEISDA AYKFQQQIDA QEKVMIGVNK YVEADEKVDI
PFLEIDDSVE TEQLERLAAV KRKRDGRRVA ETLKDLENAC KRGDNVMPYC IEAVKSFATV
QEICDVYREV FGEYRDPGIY
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