| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0237 |
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| Symbol | |
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| ID | 1219040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 259683 |
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| End bp | 262982 |
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| Gene Length | 3300 bp |
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| Protein Length | 1099 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637236594 |
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| Product | putative methylmalonyl-CoA mutase protein |
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| Protein accession | NP_518358 |
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| Protein GI | 17544956 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.556775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TTTCCGCCGC CCGCGCGGCC GAACCGACGT CTGCGAGCGA GCCCGGCGCG
GTGAGCAACA AGGTGCGCTT CGTCACGGCG GCTTCGTTGT TCGACGGCCA CGATGCGTCC
ATCAACATCA TGCGGCGCAT CCTGCAGTCG ATGGGTTGCG AGGTGATCCA CCTGGGGCAC
AACCGTTCGG TGGACGAGGT GGTCAACGCG GCCCTGCAGG AGGATGTGCA GGGCATTGCC
GTGTCCAGCT ACCAGGGCGG CCACGTCGAG TACTTCAAAT ACATGATCGA CGCGCTGCGC
GCGCGCGGCG GCGAGCACAT CCAGGTGTTC GGCGGCGGCG GCGGGGTGAT CGTGCCGGCC
GAGATCCGCG AGCTGCAGGA CTACGGCGTG GCACGCATCT ACAGCCCGGA GGACGGCCAG
CGCATGGGCC TGGCCGGTAT GATCGCCGAC ATGGTGCGGC GCTGCGATAT CGATCTCGCT
GCGTATGCGC CGACGACGCT GGAGCCTGTC GCCAAGGGCG ATCGGCGTGC GCTTGCGCAA
CTGATCACCG CTCTGGAATC GGGGCGCATC GACCCGGCGC TGCGCCAGGC CGTGCACGCG
CGCGCGGCCA CGGCGCACAC GCCGGTGCTC GGCATCACGG GCACGGGCGG CGCGGGCAAG
TCGTCGCTGA CCGACGAGCT GATCCGCCGC TTCCGGCTCG ACCAGCACGA CCGCCTGCGC
ATCGCCGTGA TCTCGATCGA TCCGTCGCGG CGCAAGTCGG GCGGGGCGCT GCTGGGCGAC
CGCATCCGCA TGAACGCGAT CAACCACCCG AACCTCTTCG TGCGCTCGCT GGCCACGCGC
GAGGCGAGCA GCGAGATTTC CGACGCGCTG CCGGACGTGA TCGCCGCGTG CCGCGCGGGC
GGCTTCGATC TCATCATCGT CGAGACCTCG GGCATCGGCC AGGGCGATGC GGCCATCGTG
CCGCATGCCG ATCTGTCGCT GTACGTGATG ACGCCGGAAT TTGGCGCGGC CAGCCAGTTG
GAGAAGATCG ACATGCTCGA CTTTGCCGAC CTGGTGGCGA TCAACAAGTT CGACCGCAAG
GGCGCGCAGG ATGCCTGGCG CGACGTCGCC AAGCAGGTGC AGCGCAACCG CGAGCAATGG
CACGCCAAGC CGGAAGACAT GCCGGTGTTC GGCACCCAGG CCTCGCACTT CAACGACGAC
GGCGTGACCG CGCTCTACCA CGCGCTGGCC GACCGGCTGG CCGAGCGCGG CATGGCGCTG
GCCGAGCGCA CGCTGCCGCG TCCGGCCGGC ACCTGCTCGA CCAGCCACGA CGCCATCGTG
CCGCCCGCCC GCGTGCGCTA CCTGGCCGAG GTGGCCGATA CGGTGCGCGG TTATCACCGC
CGCGTCGATG CGCAGAGCGG CCTCGCCCGC GAGCGCCAGC AGCTGCAAGC CAGCCGCCGC
ATGCTGGAAG CCGCTGGCGC GGCGGCCGAC GTGCTGACCG CGCTCGACGC GCAAGCCGCC
GAGCGCGATG CCCGGCTCGG CGCTGCCGAG CGCAAGCTGC TCGCGATGTG GCCCGATCTG
CGCCGCGCAT ATGCCGGCGA CGAATACGTC GTCAAGATCC GCGACCGTGA GCTGCGCACG
CCGCTCACGT ACACCACGCT GTCGGGCACC ACCCTGCGCA AGGTCGTGCT GCCGCCGTAC
GAAGACGACG GCGAGATCCT GCGCTGGCTG ATGCGCGAGA ACGTGCCGGG CAGCTTCCCG
TACACGGCCG GCGTGTTCGC CTTCAAGCGC CGGGGTGACG TGGGCGGTGA AGACCCGACC
CGCATGTTCG CCGGCGAGGG CGATGCCTTG CGCACCAATC GCCGCTTCAA GCTGGTCTCC
GAGGGCATGG AGGCCAAGCG GCTGTCCACC GCGTTCGACT CCGTCACGCT GTACGGCGAA
GACCCCGACC CGCGTCCCGA CATCTACGGC AAGGTCGGCA ACGCGGGCGT GTCGATCGCC
ACGCTCGACG ACCTGAAGGT GCTGTACGAC GGCTTCGACC TGACCAGCCC GAACACCTCC
GTCTCGATGA CGATCAACGG CCCCGCGCCG ACCATCCTGG CGATGTTCAT GAACACCGCC
CTCGACCAGA ACCTCGCCAG GTTCCGCGCC GACAACGGCC GCGAGCCGAC CGAGGGCGAG
GAGGCGAAGA TCCGCGCCTG GGTGCTGCAG AACGTGCGCG GCACGGTGCA GGCCGACATC
CTCAAGGAAG ACCAGGGCCA GAACACCTGC ATCTTCTCGA CCGCGTTCTC GCTCAAGGTG
ATGGGCGACA TCCAGGAATA TTTCGTGCAC CACCAGGTGC GCAACTTCTA CTCGGTGTCG
ATCTCCGGCT ACCACATCGC CGAGGCCGGG GCGAACCCGA TCTCGCAACT GGCCTTCACG
CTCGCCAACG GCTTCACGTA TGTGGAGGCG TACCTCGCGC GCGGCATGCA CATCGATGAT
TTCGCGCCCA ACCTGTCGTT CTTCTTCTCC AACGGCATGG ACCCGGAGTA CAGCGTGCTG
GGCCGCGTGG CGCGCCGCAT CTGGGCGGTG ACGATGCGCG ATAAGTATGG CGCCAACGAG
CGCAGCCAGA AGCTCAAGTA CCACGTGCAG ACCTCGGGCC GCTCGCTGCA CGCGCAGGAG
ATCGCCTTCA ACGACATCCG CACCACGCTG CAGGCGCTGA TCGCCATCTA CGACAACTGC
AACAGCCTGC ACACCAACGC CTACGACGAG GCCATCACCA CGCCGACGGC CGAGTCGGTG
CGGCGCGCGC TGGCGATCCA GCTCATCATC AACCGCGAGT GGGGCCTGGC CAAGTGCGAG
AACCCGAACC AGGGCAGCTT CATCATCGAC GAGCTGACCG ATCTGGTGGA GGCGGCCGTG
CTGCGGGAGT TCGAGCGCCT CGCCGAGCGC GGCGGCGTGC TCGGCGCGAT GGAGACCGGC
TACCAGCGCG GCAGGATCCA GGAGGAGTCG ATGCTGTACG AGCAGCGCAA GCACGACGGC
TCGCTGCCCA TCGTCGGTGT CAACACCTTC CGCAACCCGG AGGCGGGGCA CGCCGCGCCC
GCGCACATCG AGCTGGCCCG CTCGAGCGAG GAAGAGAAGC AGCGCCAGCT TGCCCGCCTG
GCGGATTTCC ACGCCCGCCA CGCCGCCGAG GCGCCGGCCA TGCTGCAGCG CTTGCAGCGT
GCCGTGATCG ACGACCAGAA CGTGTTTGCC GTGCTGATGG ACGCGGTGCG CGTCTGCTCG
CTCGGGCAGA TCACGCACGC GCTGTTCGAG GTGGGGGGGC AGTATCGGCG CAATATGTAG
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| Protein sequence | MTDLSAARAA EPTSASEPGA VSNKVRFVTA ASLFDGHDAS INIMRRILQS MGCEVIHLGH
NRSVDEVVNA ALQEDVQGIA VSSYQGGHVE YFKYMIDALR ARGGEHIQVF GGGGGVIVPA
EIRELQDYGV ARIYSPEDGQ RMGLAGMIAD MVRRCDIDLA AYAPTTLEPV AKGDRRALAQ
LITALESGRI DPALRQAVHA RAATAHTPVL GITGTGGAGK SSLTDELIRR FRLDQHDRLR
IAVISIDPSR RKSGGALLGD RIRMNAINHP NLFVRSLATR EASSEISDAL PDVIAACRAG
GFDLIIVETS GIGQGDAAIV PHADLSLYVM TPEFGAASQL EKIDMLDFAD LVAINKFDRK
GAQDAWRDVA KQVQRNREQW HAKPEDMPVF GTQASHFNDD GVTALYHALA DRLAERGMAL
AERTLPRPAG TCSTSHDAIV PPARVRYLAE VADTVRGYHR RVDAQSGLAR ERQQLQASRR
MLEAAGAAAD VLTALDAQAA ERDARLGAAE RKLLAMWPDL RRAYAGDEYV VKIRDRELRT
PLTYTTLSGT TLRKVVLPPY EDDGEILRWL MRENVPGSFP YTAGVFAFKR RGDVGGEDPT
RMFAGEGDAL RTNRRFKLVS EGMEAKRLST AFDSVTLYGE DPDPRPDIYG KVGNAGVSIA
TLDDLKVLYD GFDLTSPNTS VSMTINGPAP TILAMFMNTA LDQNLARFRA DNGREPTEGE
EAKIRAWVLQ NVRGTVQADI LKEDQGQNTC IFSTAFSLKV MGDIQEYFVH HQVRNFYSVS
ISGYHIAEAG ANPISQLAFT LANGFTYVEA YLARGMHIDD FAPNLSFFFS NGMDPEYSVL
GRVARRIWAV TMRDKYGANE RSQKLKYHVQ TSGRSLHAQE IAFNDIRTTL QALIAIYDNC
NSLHTNAYDE AITTPTAESV RRALAIQLII NREWGLAKCE NPNQGSFIID ELTDLVEAAV
LREFERLAER GGVLGAMETG YQRGRIQEES MLYEQRKHDG SLPIVGVNTF RNPEAGHAAP
AHIELARSSE EEKQRQLARL ADFHARHAAE APAMLQRLQR AVIDDQNVFA VLMDAVRVCS
LGQITHALFE VGGQYRRNM
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