| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1342 |
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| Symbol | |
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| ID | 5167052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1581908 |
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| End bp | 1585255 |
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| Gene Length | 3348 bp |
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| Protein Length | 1115 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640548843 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001230116 |
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| Protein GI | 148263410 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGAG GTGAGAGCCT AGAGCCTAGA GGTTTTCCTC GAACCTCGAA CCTCGATCCT
CGATCCTCAT ATATACGTGA AACGAGGAGA ACCGACATGC ACACAACCGC CGCAGCACCC
TATACATCCA AAAACAAGAT CCGTTTCGTG ACCGCAACCA GCCTGTTCGA CGGTCACGAC
GCAGCTACCA ATATTATCCG TCGCATGCTC CAGTCCTCGG GGGCCGAGGT GATCCACCTG
GGGCACAATC GCTCCGTGGA TGTGATCGTC ACCGCCGCCA TTCAGGAGGA CGCCCAGGGG
ATAGCGGTCA GTTGCTACCA GGGTGGCCAC GTGCCGTTCT TCAAATACAT CTGCGACCTG
CTCAAAGAGC GGGGCGCCGG GCATATCCGG GTCTTCGGCG GTGGCGGCGG GGTGATCGTC
CCCGAAGAGA TCCGGGAGAT CGAAGGCTAC GGGGTGAGCA AGATATTCTC ACCCGAAGAC
GGCCGGCGCA TGGGGCTGCA GGGGATGGTC AACCACATGC TGGAGCTATG CGATTTCCAG
CCGGAACGGG ACCTGGATAC GGAAATCGAA CGGCTTAAAG GACGGGACAT CCGCTCGGTC
AATACCCTCA TCTCCCTGGC CGAACAGGCG GTCCACGAGC ATACGGAAGG GTATGGAAAG
GTCAGGGAGC GGGTTCGCGC CATGGGGAGC AAGGTGCCGG TACTGGGCAT TACCGGCACC
GGCGGGGCGG GGAAGAGCTC CCTTACCGAT GAGCTGGTGC GCCGATTGAT ACGGGATTTC
CCGGAGAAGA GCGTGGCGAT CCTGGCGGTA GACCCTTCCC GGCAGCGGAC CGGCGGCGCG
CTCCTGGGCG ACCGGATCAG GATGAACTCC ATCAATACCG ACCGGGTCTA CATGCGCTCG
CTGGCCACCC GCGACTCCCG TTCCGAGCTG TCCGCCGCCA TTGAAGACGC CATTGCCGTG
GTGCGGGCGG CAGGCTTCGA CCTGGTGATC GTCGAGACCT CCGGCATCGG CCAGGGGGAT
GCCGGGGTGG TGGAGATCTG TGACGTATCC CTCTACGTCA TGACCTGCGA ATTCGGCGCG
CCGACCCAGC TGGAAAAGAT CGACATGCTC GACTTCGCCG ACATCGTCGC CCTCAACAAG
TTCGAGCGGA AGGGTTCGGA GGATGCCATG CGCAACGTGC GCAAGCAGTA CCGGCGCAAC
CGCAACCTGT TCGACCTCGC CGACGAGGAG CTGCCGGTGT TCGGCACTAT CGCTTCCCAG
TTCAACGACC CCGGCACCAA TGTCCTTTAC CGGGCGGTGC TCGACCGGTT CAACGAGAAG
AAGGGGCTCG GCTGGCAGTC GCAGCTTGCC ATTACCGAGC GGGAGAGCCT GAAGAAGTAC
ATCATCCCAT CCGACCGGAT TCATTACCTG GGGGAGATCG TCCAGTCGGT GCGCGGCTAC
CGGAAAACCG CGGCGGAGCA GGCGCAGATC GCCCGCACCC TCTTCCAGCT CAAGGGGACC
CGTGCCCTCC TTGCCGACAG TGACGCGACC GCGGCGGGGG TTGACCAACT GATAGGATAT
TACGAGGCCA AGCTCCGGGA TGAGCCGCGC CGGATCATCG AGAGCTGGCC GGGAATGAAG
CAATCGTACC GTCAGGACGC CCTCGTGACA AGTGTGAGGG ACAAGGAAAT CCGCACCGAA
CTCTACACCA CCTCCCTCTC CGGGACCAAA ATCCCCCGGG TCTGCGTCCC CGATTACGAG
GACTGGGGGG AGATCGTCAA GTGGAGCATG AAGGAGAACG TGCCGGGCTC GTTCCCCTTT
ACCGCCGGGG TCTTCCCCTT CAAGCGGGTC GAGGAGGACC CTAAACGACA GTTCGCCGGC
GAGGGGACCC CGGAGCGGAC CAACCGGCGC TTTCACTACC TTTGCCGGGA CGACGGCGCC
AAGCGCCTTT CCACGGCCTT CGACAGCGTT ACCCTCTACG GCGAGGACCC GGATTTTCCT
CCCGACGTCT ATGGCAAGGT GGGGGAGAGC GGCGTCTCCA TCTGCACCGT GGAGGACGTG
AAGAAGCTCT ATGCCGGCTT CGACCTCTGC GCCCCCTCCA CCAGCGTCTC CATCACCATC
AATGGCCCGG CGCCGATGAT GCTCGCCATG TTCTTCAATG CGGCCATCGA CCAGCAGGTG
GACCGGTTCC GCGGGGAAAA GGGGCGTGAG CCCGCCGCCG CCGAGTACGA GCTGATCCGG
GCTTGTACCC TGCAGACCGT GCGCGGCACT GTCCAGGCCG ACATCCTCAA AGAAGACCAG
GGGCAGAACA CCTGCATCTT CTCCACCGAG TTCGCCCTGA AGATGATGGG TGACATCCAG
CAGTACTTCA TCGACAAGCA GGTGCGGAAT TATTACTCCG TCTCCATCAG CGGCTACCAC
ATCGCCGAGG CCGGGGCGAA CCCCATCAGC CAGCTCGCCT TCACCCTTTC CAACGGCTTC
ACCTATGTGG AGTATTACCT TTCCCGGGGG ATGCACATCG ACGACTTCGC CCCGAACCTC
TCCTACTTCT TCTCGAACGG CCTCGACCCG GAGTACACGG TGATAGGCCG TGTGGCGCGG
CGCATCTGGG CGGTAACCAT GCGGGAGAAA TACGGCGCCA ACGAGCGGAG CCAGAAGCTC
AAGTACCACA TCCAGACCTC CGGCCGCTCG CTCCATGCCC AGGAAATGGA CTTCAACGAC
ATCCGCACCA CCCTACAGGC GCTGATGGCC CTCTACGACA ACTGCAACTC GCTGCACACC
AACGCCTACG ACGAGGCGGT CACGACACCC TGCGAGGAGT CGGTGCGCCG CGCCATGGCG
GTGCAGATGA TCATCACCAA GGAGTTGGGG CTGAACAGGA ACGAGAACCC GCTCCAGGGG
GCGTTCATTA TCGACGAACT GACCGACCTG GTGGAGGAGG CTGTGCTGGC CGAGTTCGAA
AGGATCGACC AGCGGGGCGG GGTGCTCGGC GCCATGGAGA CCCAGTACCA GCGGAGCAAG
ATCCAGGACG AGTCCATGCT TTACGAGCAC AAGAAGCACT CGGGCGAGCT CCCCATCATC
GGCGTCAACA CCTTCCTGAA CCCCCGCGCC GATGAGGACG GATACCAGGT GCCGGGCGAA
CTGGCCCGGG CTACCATTGA AGAAAAGGAG CAGCAGATTC GAAACCTGCG CGCCTTCCAG
GAGCGGAACA GGGTAAAGGC CCCGCTGGCC CTGAAGCGCC TCCAAGAGGT GGCTGTCAGT
GGCGGCAATA TCTTTGCCGA GTTGATGGAG ACGGTGAAGT ACGCCTCTCT CGGCCAGATC
ACCAGGGCGT TGTTTGAGGT GGGGGGCGAA TATCGAAGAA ACATGTGA
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| Protein sequence | MARGESLEPR GFPRTSNLDP RSSYIRETRR TDMHTTAAAP YTSKNKIRFV TATSLFDGHD
AATNIIRRML QSSGAEVIHL GHNRSVDVIV TAAIQEDAQG IAVSCYQGGH VPFFKYICDL
LKERGAGHIR VFGGGGGVIV PEEIREIEGY GVSKIFSPED GRRMGLQGMV NHMLELCDFQ
PERDLDTEIE RLKGRDIRSV NTLISLAEQA VHEHTEGYGK VRERVRAMGS KVPVLGITGT
GGAGKSSLTD ELVRRLIRDF PEKSVAILAV DPSRQRTGGA LLGDRIRMNS INTDRVYMRS
LATRDSRSEL SAAIEDAIAV VRAAGFDLVI VETSGIGQGD AGVVEICDVS LYVMTCEFGA
PTQLEKIDML DFADIVALNK FERKGSEDAM RNVRKQYRRN RNLFDLADEE LPVFGTIASQ
FNDPGTNVLY RAVLDRFNEK KGLGWQSQLA ITERESLKKY IIPSDRIHYL GEIVQSVRGY
RKTAAEQAQI ARTLFQLKGT RALLADSDAT AAGVDQLIGY YEAKLRDEPR RIIESWPGMK
QSYRQDALVT SVRDKEIRTE LYTTSLSGTK IPRVCVPDYE DWGEIVKWSM KENVPGSFPF
TAGVFPFKRV EEDPKRQFAG EGTPERTNRR FHYLCRDDGA KRLSTAFDSV TLYGEDPDFP
PDVYGKVGES GVSICTVEDV KKLYAGFDLC APSTSVSITI NGPAPMMLAM FFNAAIDQQV
DRFRGEKGRE PAAAEYELIR ACTLQTVRGT VQADILKEDQ GQNTCIFSTE FALKMMGDIQ
QYFIDKQVRN YYSVSISGYH IAEAGANPIS QLAFTLSNGF TYVEYYLSRG MHIDDFAPNL
SYFFSNGLDP EYTVIGRVAR RIWAVTMREK YGANERSQKL KYHIQTSGRS LHAQEMDFND
IRTTLQALMA LYDNCNSLHT NAYDEAVTTP CEESVRRAMA VQMIITKELG LNRNENPLQG
AFIIDELTDL VEEAVLAEFE RIDQRGGVLG AMETQYQRSK IQDESMLYEH KKHSGELPII
GVNTFLNPRA DEDGYQVPGE LARATIEEKE QQIRNLRAFQ ERNRVKAPLA LKRLQEVAVS
GGNIFAELME TVKYASLGQI TRALFEVGGE YRRNM
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