| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_0229 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | - |
|---|
| Start bp | 196874 |
|---|
| End bp | 198535 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | methylmalonyl-CoA mutase, large subunit |
|---|
| Protein accession | ACX90525 |
|---|
| Protein GI | 261600922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTG AAGATAGAAT TAAGGAATGG GAAGAAAAGG TCTATTCAAG TTGGGTAAAG
AAGAGGGGAG AGAGGAAAAA AGAATTCAAA ACGTTTTCTG GAATACATAT TAAACCAGTT
TATACACCAT TGGATGTCAA GGGCAATTAT ATGGAAAAAT TAGGATTACC AGGTGAGTAT
CCATTTACAA GGGGAATCTA TCCTAATATG TATAGAGGAA GAATTTGGAC AATTAGACAA
TATGCAGGAT TTGGATCTGC AGAAGAGACG AATTCTAGAT TTAGGAAATT ATTGGAAGCT
GGGCAAACTG GCTTAAGTAT GGCCTTTGAT TTGCCTACTC AATTGGGATT AGATCCAGAT
CATGAATTAG CTTATACAGA GATTGGAGTT GTTGGAGTAT CGATGTTCCA TTGGAAGGAA
ATGGATATTG TAATGTCCGG AATACCGCTC GATAAAGTTA CCACTTCAAT GACTATAAAT
GCCACCGCTA TGGAATTACT CTCAATGCTG ATTGCCACTT CCGAAAGTAG AAATATTAAC
AAGAGCGTTT TGGATGGGAC AGTTCAGAAC GATATCTTAA AGGAGTATAT AGCTAGGAAG
AACTTCATAT ATCCTCCTTC GCCCTCGATG AGATATGCTA TCGACATTAT AGAATACTCC
GCAAAGTATT TACCGAAATG GCACCCAATA AGTATAAGTG GCTATCACAT AAGGGAAGCT
GGAGCGGACG CAGTATTAGA AGTGGCATTT ACGTTAGCTG ACGGTATGGA GTATGTCAGA
AAAACAATGG AGAGAGGAAT TAACGTAGAT GAATTTGCAC CACACTTATC CTTCTTCTTT
GCAGCTTACT CAGATATATT CGAGGAAGTT GCTAAATTTA GAGCTGCTAG GAGAATGTGG
GCGAAAATAA TGAAAGAAGT ATTCAACGCT AAGAAACCAG AGTCAATGAT GTTAAGGTTC
CATACTCAAA CAGGTGGCGC TGAATTGACC GCGCAACAGC CAGAGATAAA CATCATAAGA
ACTACATTAC AAGCTTTAGC GGCCGTATTG GGCGGAACCC AGAGTTTACA CGTTAATTCT
TATGATGAAG CGTTAGCATT ACCTACTGAA AAGGCTGCTA AAATAGCTAT AAGGGTCCAG
CAGATAATAG CGAACGAGAG TGGAGCGGCT GATGTAGTAG ATCCATTAGG AGGTTCATAT
TACATAGAGT GGCTAACAGA TGAAATAGAG GAGAGGGCAT GGAAAATTAT AGACCAAGTA
GAAAAGATGG GTGGTATGAT AAAAGCCATA GAAAACGGGT ATCCCCAAGC GCAGATAGCT
GAAAGCGCCT ATAAGATACA GAAAAGAATA GAGGAAGGTG ACCTAGGAAA AGTTGGCGTT
AATATGTATT ATGAACCAGA ATGGATTGGA ACAACTGAAA TATTTAGAGT CAATCCGGAG
GTTAGGGAAA GGGTAATTTC AAGGTTAAAG AAGTATAAAC AAGAGAGAGA TGAGATGAAA
CTTAGGGAGA GTCTCAATAA TCTCCGGAAA ATTGCTGAGA AGGAGAATGA GAATTTATTC
CCATACATGA TTGATGCCAT AAGGGCAGGG GCAACAGTAG GGGAGACCAG TGGCGTTTTA
AGAGATATTT GGGGAGAGTA TAAAGAACCT TCTATTTTCT GA
|
|---|
| Protein sequence | MDVEDRIKEW EEKVYSSWVK KRGERKKEFK TFSGIHIKPV YTPLDVKGNY MEKLGLPGEY
PFTRGIYPNM YRGRIWTIRQ YAGFGSAEET NSRFRKLLEA GQTGLSMAFD LPTQLGLDPD
HELAYTEIGV VGVSMFHWKE MDIVMSGIPL DKVTTSMTIN ATAMELLSML IATSESRNIN
KSVLDGTVQN DILKEYIARK NFIYPPSPSM RYAIDIIEYS AKYLPKWHPI SISGYHIREA
GADAVLEVAF TLADGMEYVR KTMERGINVD EFAPHLSFFF AAYSDIFEEV AKFRAARRMW
AKIMKEVFNA KKPESMMLRF HTQTGGAELT AQQPEINIIR TTLQALAAVL GGTQSLHVNS
YDEALALPTE KAAKIAIRVQ QIIANESGAA DVVDPLGGSY YIEWLTDEIE ERAWKIIDQV
EKMGGMIKAI ENGYPQAQIA ESAYKIQKRI EEGDLGKVGV NMYYEPEWIG TTEIFRVNPE
VRERVISRLK KYKQERDEMK LRESLNNLRK IAEKENENLF PYMIDAIRAG ATVGETSGVL
RDIWGEYKEP SIF
|
|---|
| |