| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4569 |
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| Symbol | |
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| ID | 6246088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1628780 |
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| End bp | 1630891 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642596320 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001860727 |
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| Protein GI | 186473385 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.365134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC AGCGGCGGCG TGGGTCGCAT CGCGTGAGGC TGAAGCGCGT CTACACGCGC
GCGGATGTCG ACGGCATCGC GCATATCGAT AGCATGCCGG GCGAGGCGCC GTTCGTGCGC
GGCCCGTTCG CGACGATGTA CACGCAAAAG CCGTGGACGA TACGCCAGTA CGCGGGGTAT
GCGCAGGCCT CCGATACGAA CCTCGCGTTC CGCACTGCGC TGGCGGAAGG CGCACAGGGT
CTCTCCGTCG CCTTTGACCT GCCGACCCAG CGCGGCTACG ACTCAGACGA TCCGGCGGTG
AGCGCGGACG TCGGCATGAC GGGTGTCGCA ATCGATACGG TAGAGGACAT GACTCGCCTT
TTCGAAGACA TTGCACTCGA CCGCGTGTCT GTATCGATGA CAATAAACGG GGCGGTGCTT
CCTGTGCTTG CTGCTTTCAT CGTCGCGGCG GAAGAAAGCG GCGTTAGTGC CTCGCAACTG
AGGGGAACGA TTCAGAACGA CATCCTGAAA GAGTTTATGG TGCGGAACAC GAGCATCTTC
GCACCTGAGC CTTCATTGCG CATCGCTGCC GACGTCGTTG AATACCTCAG CGAAAACGTG
CCGCGGTTCA ATGCGCTCTC GGTGTCGGGC TATCACTTCC AGGAAGCGGG TGCGGACCCT
GTACTTGAAC TTGCGCTAAC AATGGCGAAT GCGCGCAAGT ACGTAACGGC CCTTGTCGGA
CGGGGGATGC AGGCCGATGA CGTCTGTCAG CGGATGAGCT TCTTCTTCGG CGTCGGAATG
GACTTCTACG CCGAAATCGG GAAGCTGAGA GCGGCACGGA TTTTATGGTC GGATATTGCG
TCGGCAAGTG GCGCAACGTC GGATAGGGCG CGTGCACTGC GAATGCACTG TCAGACATCC
GGGTGGTCGC TCACGGCGCA AAAACCGATG AACAACGTCG TGCGTACGAC AGTCGAGGCG
TTGGCTGCCG TGTTCGGCGG AACGCAATCG CTGCACACTA ACGGATACGA CGAAGCGCTT
TCTCTTCCTT GTGCAGAAGC GTCAAGCCTC GCTCGTGACA CGCAACTGGT GCTGCAGCAC
GAAACCGGCC TATGTGATGT CGTCGATCCG TGGGCCGGTT CGTACATGAT GGAGAACCTT
ACGGCGGAGA TCTGTCGCGA GGCGCTAACG CTGATGGCTG AAATCGAACG CCGTGGTGGC
GTGATTGATG TCGTCGAATC AGGGTGGGTT CGAGAACAGA TCCACAGGTC GGCTTTGAAC
ACACAGGCGG AAATCGAGAC GGGAAAGCGC ACGGTTGTGG GCGTCAACAA TTTCATGACG
GGATGCAATG AAGACCTCGG AGAGCCACAG GCTGTCGACG GCCGGCGGGT GCGCGTGCTG
CAAACGCAAA GGCTTGCTCA CATCAAGGCG AGGCGTGATC CAACGAGAGT ACGCGACACG
CTGGATGCGC TGACGCGCGC CGCCCAGAGC AGAGACGGAA ATCTTCTTGA ACTGACGGTG
GCATGCATGC GAGCGCGTGC AACCGTCGGC GAGTGCACTC AGGCACTCGA AGCCGTATGG
CCGAGATATC GAATCGGCTT GCCGCTATCG CGCGACCGCT ACGGCGCAAA GCTCGCAAGC
GACGAGGATT GGCAGAACGC ATGCCGCGCC GTGGCCGACG CGACGAAGAG CCTGGGCCGT
GCGCCACGCG TGTTGATCGC AAAGCTGGGA CAAGACGGAC ATGACCGGGG CGCGCGTATT
GTCGCAGCGG CCTTAAGTGA TGCGGGCTTC GCGGTTTCCG CGGGATCGAT GTTTGCATCA
CCTTCCGATA CCGCCGTATT GGCTGGAGGA GAGCGGGTTG ACGTTATCGG CGTGTCGTCG
CTCGCCGGCG CACAAAACGA CTTGATCGCC GCGTTGCGTG AGCAACTGAC TGAACGCGGT
TTGCGGATAC CTATCGTGGT GGGCGGAATC ATCGGTCAGG CGAGTCAATT GGTCCTTCAA
CGCTCCGGAG TGGCAGCTTG CTTTCCGGCG GGCACCCCGA TCAAAAATAT GGTGCCGCTA
TTGGCTGCGA TAGCTGTAGC GTCGGCAGAA AAACGCGTTG AAGGTAGCCA CCCGTTACAC
GAGACTGCAT AA
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| Protein sequence | MNMQRRRGSH RVRLKRVYTR ADVDGIAHID SMPGEAPFVR GPFATMYTQK PWTIRQYAGY
AQASDTNLAF RTALAEGAQG LSVAFDLPTQ RGYDSDDPAV SADVGMTGVA IDTVEDMTRL
FEDIALDRVS VSMTINGAVL PVLAAFIVAA EESGVSASQL RGTIQNDILK EFMVRNTSIF
APEPSLRIAA DVVEYLSENV PRFNALSVSG YHFQEAGADP VLELALTMAN ARKYVTALVG
RGMQADDVCQ RMSFFFGVGM DFYAEIGKLR AARILWSDIA SASGATSDRA RALRMHCQTS
GWSLTAQKPM NNVVRTTVEA LAAVFGGTQS LHTNGYDEAL SLPCAEASSL ARDTQLVLQH
ETGLCDVVDP WAGSYMMENL TAEICREALT LMAEIERRGG VIDVVESGWV REQIHRSALN
TQAEIETGKR TVVGVNNFMT GCNEDLGEPQ AVDGRRVRVL QTQRLAHIKA RRDPTRVRDT
LDALTRAAQS RDGNLLELTV ACMRARATVG ECTQALEAVW PRYRIGLPLS RDRYGAKLAS
DEDWQNACRA VADATKSLGR APRVLIAKLG QDGHDRGARI VAAALSDAGF AVSAGSMFAS
PSDTAVLAGG ERVDVIGVSS LAGAQNDLIA ALREQLTERG LRIPIVVGGI IGQASQLVLQ
RSGVAACFPA GTPIKNMVPL LAAIAVASAE KRVEGSHPLH ETA
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