| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2811 |
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| Symbol | |
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| ID | 3580949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3300122 |
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| End bp | 3303364 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686536 |
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| Product | methylmalonyl-CoA mutase, N-terminal |
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| Protein accession | YP_290867 |
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| Protein GI | 72163210 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.153738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA AGGCCACGCC AGGGGCACTA CACCGTCCGA CCCACCCCGT GCGGTTCGTC
ACCGCGTCCA GCCTGTTCGA CGGGCACGAC GCGGCGATCA ACATCATGCG CCGCATCCTG
CAATCGCAGG GAGCCGAAGT CATCCACCTG GGACACAACC GGTCGGTGCG TGAGGTCGTA
GACGCCGCCC TCGAAGAAGA CGTCCAAGGA ATCGCGGTCA GCTCCTACCA GGGCGGACAC
GTCGAATACT TCAAATACCT GGTCGAACTG CTCCGAGAAC AGCACGCCGA CCACATCAAG
GTGTACGGCG GTGGGGGAGG CGTCATCGTC CCCCAGGAGA TCGCCCGGCT CCGCGAATCC
GGGGTGACCA TCTTCTCCCC CGAAGACGGC CAGCGCCTCG GCCTCGCCGG GATGATCAAC
ACCCTCATCC GCGAATGCGA CTACGACCTG TGGGAGCACC GCCGGGCCGA CCTGGAAGCC
GTCGTCGCCG GAGACCGGCT CGCCCTCGCC CGCGCCATCA CCGGAGCGGA ACTCGGCCGC
CTCACCGACG AAGAGCGGTC CTGGCTGCGC TCAGCTGCCT CCGCCCCGCC GGTCCTCGGC
ATCACCGGCA CAGGCGGCTC CGGGAAGTCC TCCCTCACCG ACGAGCTGGT GCGCCGCTTC
CGCTTCGACC AGCAGAACAA ACTGCGGATT GCGGTGATCG CGATCGACCC CACGCGCCGC
CGCGGCGGCG GGGCGCTGCT CGGCGACCGC ATCCGCATGA ACTCCATCGA CAGCGACCAC
ATCTTCTACC GCTCCCTGGC CACCCGAGGC AGCCGCGAGC TCCCCGAACA CATCGACGAC
ATCCTCACCG TCGTCAAAGC CGCCGGATTC GACCTGATCA TCGTGGAAAC CCCGGGCATC
GGGCAGGGCG ACGCGGCGAT CGTGCCGTAC TCGGACGTGT CCCTGTACGT GATGACCCCC
GAGTTCGGCG CCGCCTCCCA GCTCGAAAAA ATCGACATGC TCGACTTCGC CGACGTGGTG
GCGATCAACA AGTTCGAGCG GCGCGGCGCC CACGACGCCC TGCGCGACGT GCGCCGCCAG
TTGATCCGCA ACCGGGAAGC GTTCGGCATC AAACCCGAAG ACATGCCGGT GTTCGGCACC
TCCGCCGCCA CCTTCAACGA CGACGGGGTC ACCGCGCTCT ACCAGCACCT GCGCGACCTT
CTCGCCGAGC GGGGCCTGCC CGTCAGCGAA GGCGTCCTCC CCCGCGTCGA CGTCCGCCAC
TCCACCGGCA TCACCCAGGT GGTGCCGCCC CACCGGGTCC GCTACCTCTC CGAAATCGCC
GACACCGTCC GCGCCTACCA CGCGGAGACC CGGCGGCTTG TCTCCGCGGT CCGCCGAGTC
CAACGGCTCG AAGAAACCGC CCGCGACCTC GCCGCGGCGG GACACGACAC CAGCGCCGTC
GACGAACTGC TCGCCAAAGC CCGCAAAGAA GTCCCCGAGG ACGTCGCCGA GCAGCTCGCG
AACTGGCCGA ACGTGGTGGC CTCCTACTCC GGTGACGAGC AGGTCATCAA AGTACGCGAC
CGCGAGATCC GCACCCGGCT CCACCGCGAG TCCCTGGCAG GCACGAAGAT CCCCCGCGTC
GCCCTGCCCC GCTACACCGA CCACGGGGAA CTCGTGTCCT TCCTGCGGCG GGAGAACCTT
CCCGGCTTCT TCCCCTTCAC CGCGGGCGTC TTCCCGTTCA AACGGGACGA CGAAGAACCC
GCCCGCATGT TCGCGGGGGA AGGCGACCCG TTCCGCACCA ACCGGCGCTT CAAACTCCTG
TCCGAAGGCC AGCCCGCGAC CCGGCTCTCC ACCGCGTTCG ACTCCGTCAC CCTGTACGGC
CGCGACCCGG ATCCCCGACC CGACATCTAC GGCAAGATCG GCACCTCCGG CGTCTCCGTG
GCCACGCTCG ACGACATGAA GGAGCTGTAC GCCGGGTTCG ACCTGGCCGC GCCCACCACG
TCGGTGTCGA TGACCATCAA CGGGCCGGCC CCCACCGTGC TGGCGTTCTT CCTCAACACG
GTCATCGACC AGCAGCTCGA CGCGTTCCGG GACAAGCACG GCCGGGACCC CGACGAGCAG
GAAGCCGCGG AGATCCGTGC CAACGCGCTG CGGTCGGTGC GCGGCACAGT GCAGGCCGAC
ATCCTCAAAG AGGACCAGGG ACAGAACACG TGCCTGTTTT CCACCGAATT CTCGCTGCGG
ATGATGGCCG ACATCCAGGA ATGGTTCATC GCCAACCAGG TCCGCAACTT CTACTCGGTG
TCCATCTCCG GCTACCACAT CGCCGAAGCC GGGGCGAACC CGATCACCCA GCTCGCGTTC
ACCCTCGCCA ACGGCTTCAC CTACGTGGAG GCCTACCTGG CGCGGGGCAT GCACATCGAC
GACTTCGCGC CCAACCTGTC GTTCTTCTTC TCCAACGGCA TGGACCCCGA GTACTCGGTA
CTGGGGCGGG TGGCGCGCCG CATCTGGGCG ATCGCGATGC GCGACAAGTA CGGCGCCAAT
GAGCGCTCGC AGAAGCTCAA ATACCACGTG CAGACGTCGG GGCGGTCCCT GCACGCCCAG
GAGATGCAGT TCAACGACAT CCGCACCGCG CTGCAGGCGC TCATCGCGAT CTACGACAAC
GCCAACAGCC TGCACACCAA CGCCTACGAC GAGGCCATCA CCACCCCCAC CGAGGAGTCG
GTGCGCCGGG CGCTGGCGAT CCAGCTCATC ATCAACCGGG AATGGGGCCT GGCGATGAAC
GAGAACCCGC TCCAAGGCTC CTTCATCATC GACGAGCTGA CCGACCTGGT GGAGGAGGCG
GTCCTCGCCG AATTCGACCG GATCACCGAA CGCGGCGGGG TGCTCGGCGC TATGGAGACC
GGCTACCAGC GCGGCCGCAT CCAAGACGAG TCGATGCTGT ACGAGCAGCG CAAACACGAC
GGATCGCTGC CCATCATCGG CGTCAACACC TTCCGCAACC CCAACGGGGA CGACGGCGCG
GCCCAAGAGA TCACCCTGGC CCGTGCCACC GAGGAGGAGA AGCAGTCGCA ACTGCGCCGG
GTCCGGGAAT TCCGGGAAAA GCACCGGGAG GAGGCTGAGC GGGAACTCGA ACGCCTTCGG
CAGGCGGTCA TCAACAACGA GAACGTGTTC GCGGTGCTGA TGGACGCGGC ACGGGTATGC
ACCCTGCAGC AGATCACCGA CGTGTTCTTC GAAGTGGGAG GCCAATACCG GAGAAACGTG
TAA
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| Protein sequence | MSDKATPGAL HRPTHPVRFV TASSLFDGHD AAINIMRRIL QSQGAEVIHL GHNRSVREVV
DAALEEDVQG IAVSSYQGGH VEYFKYLVEL LREQHADHIK VYGGGGGVIV PQEIARLRES
GVTIFSPEDG QRLGLAGMIN TLIRECDYDL WEHRRADLEA VVAGDRLALA RAITGAELGR
LTDEERSWLR SAASAPPVLG ITGTGGSGKS SLTDELVRRF RFDQQNKLRI AVIAIDPTRR
RGGGALLGDR IRMNSIDSDH IFYRSLATRG SRELPEHIDD ILTVVKAAGF DLIIVETPGI
GQGDAAIVPY SDVSLYVMTP EFGAASQLEK IDMLDFADVV AINKFERRGA HDALRDVRRQ
LIRNREAFGI KPEDMPVFGT SAATFNDDGV TALYQHLRDL LAERGLPVSE GVLPRVDVRH
STGITQVVPP HRVRYLSEIA DTVRAYHAET RRLVSAVRRV QRLEETARDL AAAGHDTSAV
DELLAKARKE VPEDVAEQLA NWPNVVASYS GDEQVIKVRD REIRTRLHRE SLAGTKIPRV
ALPRYTDHGE LVSFLRRENL PGFFPFTAGV FPFKRDDEEP ARMFAGEGDP FRTNRRFKLL
SEGQPATRLS TAFDSVTLYG RDPDPRPDIY GKIGTSGVSV ATLDDMKELY AGFDLAAPTT
SVSMTINGPA PTVLAFFLNT VIDQQLDAFR DKHGRDPDEQ EAAEIRANAL RSVRGTVQAD
ILKEDQGQNT CLFSTEFSLR MMADIQEWFI ANQVRNFYSV SISGYHIAEA GANPITQLAF
TLANGFTYVE AYLARGMHID DFAPNLSFFF SNGMDPEYSV LGRVARRIWA IAMRDKYGAN
ERSQKLKYHV QTSGRSLHAQ EMQFNDIRTA LQALIAIYDN ANSLHTNAYD EAITTPTEES
VRRALAIQLI INREWGLAMN ENPLQGSFII DELTDLVEEA VLAEFDRITE RGGVLGAMET
GYQRGRIQDE SMLYEQRKHD GSLPIIGVNT FRNPNGDDGA AQEITLARAT EEEKQSQLRR
VREFREKHRE EAERELERLR QAVINNENVF AVLMDAARVC TLQQITDVFF EVGGQYRRNV
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