More than 300 homologs were found in PanDaTox collection
for query gene CA2559_06870 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012793  GWCH70_3339  methylmalonyl-CoA mutase, large subunit  59.81 
 
 		 1085 aa  1344    Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_2225  methylmalonyl-CoA mutase, large subunit  53.67 
 
 		 1077 aa  1175    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.552157  n/a   
 
 
-
 
NC_003295  RSc0237  putative methylmalonyl-CoA mutase protein  56.41 
 
 		 1099 aa  1258    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.556775 
 
 
-
 
NC_007298  Daro_0243  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  57.12 
 
 		 1116 aa  1275    Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_06870  methylmalonyl-CoA mutase  100 
 
 		 1139 aa  2360    Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2811  methylmalonyl-CoA mutase, N-terminal  56 
 
 		 1080 aa  1231    Thermobifida fusca YX  Bacteria  normal  0.153738  n/a   
 
 
-
 
NC_007347  Reut_A0253  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  56.69 
 
 		 1093 aa  1272    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1893  methylmalonyl-CoA mutase-like  52.85 
 
 		 1139 aa  1207    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1722  methylmalonyl-CoA mutase-like  57.16 
 
 		 1082 aa  1288    Geobacter metallireducens GS-15  Bacteria  normal  0.181913  normal  0.685956 
 
 
-
 
NC_010622  Bphy_0156  methylmalonyl-CoA mutase, large subunit  53.99 
 
 		 1127 aa  1222    Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.308187 
 
 
-
 
NC_013739  Cwoe_2289  Methylmalonyl-CoA mutase  56.84 
 
 		 1144 aa  1303    Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0243844 
 
 
-
 
NC_009483  Gura_1342  methylmalonyl-CoA mutase, large subunit  57.24 
 
 		 1115 aa  1314    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_0431  methylmalonyl-CoA mutase, large subunit  61.09 
 
 		 1298 aa  799    Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3652  methylmalonyl-CoA mutase  53.71 
 
 		 1105 aa  1189    Frankia sp. CcI3  Bacteria  normal  0.587052  normal  1 
 
 
-
 
NC_013061  Phep_1164  Methylmalonyl-CoA mutase  70.22 
 
 		 1131 aa  1673    Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_3612  methylmalonyl-CoA mutase  56.72 
 
 		 1113 aa  1260    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4054  methylmalonyl-CoA mutase  55.57 
 
 		 1139 aa  1236    Polaromonas sp. JS666  Bacteria  normal  0.632309  normal  0.527832 
 
 
-
 
NC_007951  Bxe_A4277  methylmalonyl-CoA mutase  52.66 
 
 		 1272 aa  1053    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.0862944 
 
 
-
 
NC_009943  Dole_2188  methylmalonyl-CoA mutase, large subunit  54.88 
 
 		 1086 aa  1234    Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00063386  n/a   
 
 
-
 
NC_007973  Rmet_0210  methylmalonyl-CoA mutase  57.38 
 
 		 1093 aa  1284    Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3448  methylmalonyl-CoA mutase, large subunit  60.04 
 
 		 1086 aa  1360    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_2838  methylmalonyl-CoA mutase, large subunit  56.83 
 
 		 1082 aa  1316    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2332  methylmalonyl-CoA mutase  83.42 
 
 		 1146 aa  2007    Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1077  methylmalonyl-CoA mutase, large subunit  51.65 
 
 		 1133 aa  1144    Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.953537 
 
 
-
 
NC_013093  Amir_2277  methylmalonyl-CoA mutase, large subunit  53.72 
 
 		 1092 aa  1174    Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0089  methylmalonyl-CoA mutase, large subunit  57.31 
 
 		 1095 aa  1262    Ralstonia pickettii 12J  Bacteria  normal  0.571974  normal  1 
 
 
-
 
NC_013501  Rmar_0923  Methylmalonyl-CoA mutase  59.81 
 
 		 1150 aa  1348    Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1375  methylmalonyl-CoA mutase, large subunit  57.24 
 
 		 1082 aa  1320    Geobacter sp. M21  Bacteria  n/a    normal  0.0491198 
 
 
-
 
NC_010524  Lcho_3844  methylmalonyl-CoA mutase, large subunit  56.17 
 
 		 1096 aa  1248    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013730  Slin_2256  Methylmalonyl-CoA mutase  65.11 
 
 		 1110 aa  1524    Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.642899 
 
 
-
 
NC_013595  Sros_3556  Methylmalonyl-CoA mutase  54.97 
 
 		 1073 aa  1218    Streptosporangium roseum DSM 43021  Bacteria  normal  0.0534628  normal  0.668167 
 
 
-
 
NC_008699  Noca_4143  methylmalonyl-CoA mutase, large subunit  52.19 
 
 		 1043 aa  1107    Nocardioides sp. JS614  Bacteria  normal  0.578246  n/a   
 
 
-
 
NC_013159  Svir_24570  methylmalonyl-CoA mutase family protein  54.86 
 
 		 1079 aa  1192    Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.990884 
 
 
-
 
NC_009675  Anae109_3169  methylmalonyl-CoA mutase, large subunit  55.46 
 
 		 1097 aa  1216    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_1029  methylmalonyl-CoA mutase, large subunit  55.41 
 
 		 1081 aa  1228    Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_0095  methylmalonyl-CoA mutase, large subunit  57.31 
 
 		 1095 aa  1274    Ralstonia pickettii 12D  Bacteria  normal  0.778156  normal  0.758233 
 
 
-
 
NC_008781  Pnap_3524  methylmalonyl-CoA mutase, large subunit  56.41 
 
 		 1097 aa  1252    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A0903  methylmalonyl-CoA mutase  56.04 
 
 		 1096 aa  1251    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1618  methylmalonyl-CoA mutase large subunit  54.16 
 
 		 1083 aa  1177    Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_3371  methylmalonyl-CoA mutase, large subunit  57.47 
 
 		 1088 aa  1280    Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1068  Methylmalonyl-CoA mutase  65.99 
 
 		 1108 aa  1533    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  32.16 
 
 		 537 aa  259  2e-67  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  32.33 
 
 		 559 aa  258  5e-67  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  32.81 
 
 		 566 aa  255  3e-66  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000166 
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  37.23 
 
 		 551 aa  254  6e-66  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  31.06 
 
 		 549 aa  247  6.999999999999999e-64  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  31.99 
 
 		 566 aa  247  8e-64  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  32.17 
 
 		 517 aa  246  9.999999999999999e-64  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.593051 
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  36.73 
 
 		 550 aa  245  3e-63  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  30.97 
 
 		 566 aa  243  2e-62  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_013744  Htur_3831  methylmalonyl-CoA mutase, large subunit  31.77 
 
 		 566 aa  243  2e-62  Haloterrigena turkmenica DSM 5511  Archaea  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  38.87 
 
 		 557 aa  242  2.9999999999999997e-62  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  37.47 
 
 		 560 aa  241  8e-62  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  38.3 
 
 		 563 aa  239  3e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  37.3 
 
 		 554 aa  237  1.0000000000000001e-60  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  37.13 
 
 		 532 aa  236  2.0000000000000002e-60  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  31.69 
 
 		 559 aa  235  3e-60  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  37.74 
 
 		 559 aa  234  8.000000000000001e-60  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  29.88 
 
 		 551 aa  233  1e-59  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  37.94 
 
 		 570 aa  233  1e-59  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  37.05 
 
 		 563 aa  232  4e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  36.1 
 
 		 552 aa  231  6e-59  Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  36.29 
 
 		 559 aa  230  1e-58  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  36.12 
 
 		 558 aa  229  2e-58  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  36.89 
 
 		 550 aa  229  2e-58  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  34.95 
 
 		 551 aa  229  2e-58  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013743  Htur_1992  methylmalonyl-CoA mutase, large subunit  37.57 
 
 		 560 aa  229  2e-58  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  36.36 
 
 		 559 aa  229  3e-58  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_0388  methylmalonyl-CoA mutase  30.18 
 
 		 714 aa  228  5.0000000000000005e-58  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_4569  methylmalonyl-CoA mutase  36.94 
 
 		 703 aa  227  8e-58  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.365134 
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  35.71 
 
 		 562 aa  227  1e-57  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  36.44 
 
 		 545 aa  226  2e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  29.13 
 
 		 709 aa  225  3e-57  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  34.86 
 
 		 531 aa  225  4.9999999999999996e-57  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  38.62 
 
 		 564 aa  225  4.9999999999999996e-57  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal  1 
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  35.75 
 
 		 549 aa  224  6e-57  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  37.03 
 
 		 560 aa  224  6e-57  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  36.72 
 
 		 562 aa  224  6e-57  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.000975641 
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  35.87 
 
 		 521 aa  224  6e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  35.48 
 
 		 549 aa  223  9.999999999999999e-57  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  34.18 
 
 		 560 aa  223  9.999999999999999e-57  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  28.97 
 
 		 709 aa  223  9.999999999999999e-57  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal  1 
 
 
-
 
NC_013235  Namu_3099  methylmalonyl-CoA mutase, large subunit  35.86 
 
 		 567 aa  224  9.999999999999999e-57  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000000149706  hitchhiker  0.00000336315 
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  35.92 
 
 		 527 aa  223  1.9999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  35.15 
 
 		 553 aa  222  3e-56  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  36.59 
 
 		 588 aa  221  3.9999999999999997e-56  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  35.77 
 
 		 562 aa  221  5e-56  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  35.75 
 
 		 542 aa  221  5e-56  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  35.88 
 
 		 555 aa  221  5e-56  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  36.59 
 
 		 588 aa  221  6e-56  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  36.12 
 
 		 549 aa  221  7.999999999999999e-56  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_013159  Svir_05680  methylmalonyl-CoA mutase  29.75 
 
 		 726 aa  221  7.999999999999999e-56  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  34.7 
 
 		 526 aa  221  8.999999999999998e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  35.75 
 
 		 552 aa  220  1e-55  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  30.24 
 
 		 529 aa  220  1e-55  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  36.05 
 
 		 567 aa  220  2e-55  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009379  Pnuc_0910  methylmalonyl-CoA mutase  30.59 
 
 		 739 aa  220  2e-55  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.736612  n/a   
 
 
-
 
NC_013595  Sros_3188  Methylmalonyl-CoA mutase  30.2 
 
 		 725 aa  219  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.36577  normal  0.670701 
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  36.07 
 
 		 518 aa  219  2.9999999999999998e-55  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.380206 
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  35.07 
 
 		 527 aa  219  2.9999999999999998e-55  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>