| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3652 |
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| Symbol | |
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| ID | 3905333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4362244 |
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| End bp | 4365561 |
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| Gene Length | 3318 bp |
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| Protein Length | 1105 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637880975 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_482733 |
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| Protein GI | 86742333 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.587052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCG ACGCGATGTC CTCCGACAAC CGGCACGAGC CGGCCGCCAC GCTGCACACA
CCAGCTCATC CGGTCCGGAT CGTGACGGCG GCCTCACTCT TCGATGGGCA TGACGCGGCG
ATCAACATCA TGCGTCGCCT GTTGCAGGCG CAGGGCGCCG AAGTGATCCA TCTCGGGCAT
GACCGCAGCG TCGAGGAGGT CGTCACCGCC GCGATCCAGG AGGACGCCCA GGGGATCGCC
CTGTCGTCCT ATCAGGGCGG GCATGTCGAG TACTTCAGCT ACCTCATCGA GCGCCTCCGT
GCGCGCGGAG CCGGCAACGT CCGGGTCTAC GGCGGCGGCG GCGGGGTGAT CCTGCCGGCG
GAGATCGACC TGCTGCACGC GCGCGGGGTC GCGCGCATCT TCTCCCCGCA GGACGGGCAG
CGGCTCGGTC TCGCAAAGAT GATCAATATG ATCATCGAGG CCTGTGACGT CGATCTGACG
GAGGACGGGC CGAAGCTCGA TGCGGTGGCG GCTGGTGAGC ACGGCGCGCT CGCCCGGGCG
ATCACCGTGC TCGAGGCGGG CCGGGACCCG CGGCTCGCGG CGGCGCTGCA GGACGAGGCC
GCCCGCCACC CGCGGGTTCC GGTCCTCGGT ATCACCGGCA CGGGTGGTTC GGGAAAGTCC
TCGCTCACCG ACGAGCTGAT CCGGCGCTTC CGCCTCGACC AGGGCGACAG CCTGCGGATC
GCGGTGCTCG CCATCGACCC CAGCCGTCGG CGGGGCGGCG GTGCACTGCT CGGTGACCGC
ATCCGGATGA ACTCCCTGGG TGATGGCACG GCAGGGAACG TGTTCTTCCG GTCCCTGGCG
ACGCGCACGG GGGGCAGTGA GGTTCCGGCT CCCCTGGCGG ATGTGATCAA AGCCTGCCAG
GCGGCCGGTT TCGATCTGGT GATCGTCGAG ACGCCGGGCA TCGGGCAGGG TGACGCGGCG
ATCGTTCCGT TCTGCGATGT TTCGCTGTAC GTGATGACAC CCGAGTACGG TGCGGCCTCA
CAGCTTGAGA AGATCGACAT GCTGGACTTC GCCGACGTGG TGGCGGTGAA CAAGTTCGAG
CGGCGCGGCG CCGAGGATGC CCGGCGTGAC GTCGCCCGGC AACTGGTGCG CAACCGGCAG
GCGTTCGACC AGTCCTGGGA GGATATGCCC GTCTTCGGCA CCTCGGCCGC CCGGTTCCAC
GACGACGGGG TGACCGCCCT GTATCAGCAC CTCGTCGGGC TGCTACGCAA ACACGATCTG
CACACCGTGT CCGGCTCGTT GCACCTGGTG CGCGGGCGGA CCTCTACCGG TCTGACCACG
GTCATTCCGT CCGCCCGGAT ACGCTATCTG GCCGAGATCA CCGAGACGGT GCGGGGCTAT
CACGCCGAGA CCGAGCGTCA GGCGCTGCTG GCCCGCCGTC GTGAGCATCT GACGACGGCC
CTTGCGGCAC TGGCCGGCGC CAACCCCAGC GCGGGCCCGG CGCCGGCGGA ACCCACCACC
CTCGCCGTGC TGCGCGACGA GGCCGAAGCC GCCCTGGCCC CCTGGACGAG GGAGCTCCTG
GCGCAATGGC CGGCGATCGT CGAGGAACGT CAGGGCGAGA AGATGACCTA TCTCGTCCGG
GGAACCGAGA TCCACACCCC GCTGGTGCGC ACCACACTCA GCGGGACTCT GATCCGGCGG
GTGGCGGTAC CCGCCATCGA CGACGACGCT CGCCTGATCC GCTTCCTGCG GCGTGAGAAC
CTGCCAGGGT ACTTCCCCTT CACCGCCGGC GTCTTTCCGT TCAAACGCGC CGGGGAGGCC
CCGGCGCGAA TGTTCGCCGG TGAAGGTGAC CCCTTCCGGA CCAACCGCCG GTTCCACTTC
CTCTCCGCCG GCTCGCCTGC GACCCGGCTG TCCACCGCCT TCGACTCGGT GACCCTCTAC
GGCCGCGATC CCGCGTCTCA GCCTGACATC TATGGCAAGA TCGGCACGTC GGGCGTGTCG
ATAGCGACGT TGGACGACAT GAAGGTCCTG TTCGCCGGGT TCGATCTGTG TGATCCGTCG
ACCAGCGTCT CGATGACCAT CAACGGCCCG GCGCCGACGA TCCTGGCGAT GTTCCTGAAC
GCCGCGATCG ACCAGCGCTT GGACGCTTTC CGCGCCGAGC ACGGCCGGGA GCCGAGCACG
GACGAGGCCG CCGAGGTCCG GGCCCGCACG CTGGCCACGG TCCGTGGCAC CGTGCAGGCG
GACATCCTCA AGGAGGACCA GGGGCAGAAC ACCTGCATCT TCTCCACCGA GTTCGCGTTG
CGGGCGATGG CGGACGTGCA GGAGTGGTTC ATCGAACACG CGGTCCGGAA CTTCTACTCG
GTATCGATCT CCGGCTATCA CATCGCCGAG GCCGGCGCCA ATCCCATCAG TCAGCTCGCG
TTCACCCTGG CCAACGGCTT CACCTACGTC GAGGCCTATC TGGCCAGAGG GATGCGCATC
GACGATTTCG CCCCGAACCT GTCGTTCTTC TTCTCCAACG GGATGGATGC GGAGTACACC
GTCATCGGGC GGGTGGCCCG CCGGATCTGG GCGGTGGCCA TGCGGGAGCG CTACGGTGCC
GCCCCCCGGT CGCAGATGCT GAAGTATCAC GTACAGACCT CGGGTCGGTC GCTGCACGCA
CAGGAGATGG CCTACAACGA CATCCGGACC ACGTTGCAGG CGCTGTGCGC GATCTACGAC
AACTGCAACA GCCTGCACAC CAATGCGTAC GACGAGGCTG TGACGACTCC TACGGAGAAC
TCCGTCCGCC GCGCGTTGGC CATTCAGATG ATCATAGATC AGGAATGGGG ACTCGCCGCC
AACGAGAATC CCCTGCAGGG ATCGTTCATC GTCGATGAAC TGACCGACCT GGTCGAGGAG
GCGGTGCTCG CCGAGTTCGA GCGGATCAGC GACCGCGGCG GTGTACTCGG CGCGATGGAG
ACCGGCTATC AGCGGGGACG CATCCAGGAC GAGTCGATGC TGTACGAGCG GCGCAAGCAC
GACGGCACCC TGCCGATCAT CGGGGTGAAC ACGTTCCTGC GGCCGGAGTC GGCCGGCACC
GATCCCGACG CCGAGGGAGG CCCGATGGAG CTCGCGCGGG CCACGGAGGA GGAGAAGCAA
TCTCAGCTCA CTCGGCTGGA GGAGTTCCAC CGCCGGCACG GCGCCGAGGC GGGCGCCGCC
CTGGAACATC TGCGGGAGGT CGCCAGGAGC GGGGGGAACA CGTTCGCGGC GCTGATGGAG
GCGGTCCGCG TCTGCTCCCT CGGGCAGATC TCCCAGGCAT TCTTCGACGT GGGTGGGCAG
TATCGACGTA ACGTCTGA
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| Protein sequence | MSSDAMSSDN RHEPAATLHT PAHPVRIVTA ASLFDGHDAA INIMRRLLQA QGAEVIHLGH
DRSVEEVVTA AIQEDAQGIA LSSYQGGHVE YFSYLIERLR ARGAGNVRVY GGGGGVILPA
EIDLLHARGV ARIFSPQDGQ RLGLAKMINM IIEACDVDLT EDGPKLDAVA AGEHGALARA
ITVLEAGRDP RLAAALQDEA ARHPRVPVLG ITGTGGSGKS SLTDELIRRF RLDQGDSLRI
AVLAIDPSRR RGGGALLGDR IRMNSLGDGT AGNVFFRSLA TRTGGSEVPA PLADVIKACQ
AAGFDLVIVE TPGIGQGDAA IVPFCDVSLY VMTPEYGAAS QLEKIDMLDF ADVVAVNKFE
RRGAEDARRD VARQLVRNRQ AFDQSWEDMP VFGTSAARFH DDGVTALYQH LVGLLRKHDL
HTVSGSLHLV RGRTSTGLTT VIPSARIRYL AEITETVRGY HAETERQALL ARRREHLTTA
LAALAGANPS AGPAPAEPTT LAVLRDEAEA ALAPWTRELL AQWPAIVEER QGEKMTYLVR
GTEIHTPLVR TTLSGTLIRR VAVPAIDDDA RLIRFLRREN LPGYFPFTAG VFPFKRAGEA
PARMFAGEGD PFRTNRRFHF LSAGSPATRL STAFDSVTLY GRDPASQPDI YGKIGTSGVS
IATLDDMKVL FAGFDLCDPS TSVSMTINGP APTILAMFLN AAIDQRLDAF RAEHGREPST
DEAAEVRART LATVRGTVQA DILKEDQGQN TCIFSTEFAL RAMADVQEWF IEHAVRNFYS
VSISGYHIAE AGANPISQLA FTLANGFTYV EAYLARGMRI DDFAPNLSFF FSNGMDAEYT
VIGRVARRIW AVAMRERYGA APRSQMLKYH VQTSGRSLHA QEMAYNDIRT TLQALCAIYD
NCNSLHTNAY DEAVTTPTEN SVRRALAIQM IIDQEWGLAA NENPLQGSFI VDELTDLVEE
AVLAEFERIS DRGGVLGAME TGYQRGRIQD ESMLYERRKH DGTLPIIGVN TFLRPESAGT
DPDAEGGPME LARATEEEKQ SQLTRLEEFH RRHGAEAGAA LEHLREVARS GGNTFAALME
AVRVCSLGQI SQAFFDVGGQ YRRNV
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