| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0431 |
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| Symbol | |
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| ID | 6282916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 477797 |
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| End bp | 481693 |
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| Gene Length | 3897 bp |
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| Protein Length | 1298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619995 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001894080 |
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| Protein GI | 187922438 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TGTCCACGCC GCAGCGCGCC GGCAGCCACA AGCTGCCCGC GGGCCGGCGA
CTGCGCTTTG TCACGGCGGC TGCGTTGTTC GACGGCCACG ATGCGTCGAT CAACATCATG
CGGCGAATTC TGCAGGCGAG CGGCGTCGAG GTGATTCACC TCGGCCACAA CCGCTCGGTC
GATGAAGTCG CCACCGCCGC GTTGCAAGAG GACGCCGACG GCGTCGCCGT GTCCAGCTAT
CAGGGCGGCC ACAACGAATA TTTCCGCTAT CTGGTCGATC TGCTGCGAGC GCGCGGCGGC
GAGCGCATCA AGGTGTTCGG CGGCGGGGGT GGGGTCATTG TCCCTGAGGA AATTTCGGAG
CTCGAGAGTT ACGGCGTCGA GAAGATCTAT TCGCCGCAGG ACGGACAGCG GCTCGGGCTG
CAAGGCATGA TCGACGATAT GATCGCGCGC TGCGCCGAAG GTGCGCGTGC GGCTGAGGCG
GTCGGGCAGA GTCGGGTTGG CGAGTGGGTG GACGAGTTTT CGAAGCGTGG TTTGCCGCGG
TTTGATTCGC GCGGCGATGC TGGTGGCGAC GAGGATGCCG TGCGAAATCC GTTTAGTCAG
GCGAGTCACG TGGGCTGCGC AACGAGCGTG GGTCATGTGG CTAACGCGGC TGACACGGCT
GACGCGGCTG ACACGGCTGA CACGGCTGAC GCGGCTGACA CGGCTGACGC GGCTGACACG
GCTGACACGG CTGACACGGC TGACACGGCC ATCGCGGCCA ACACAGCCAA CACAGCCAAC
ACAGCCAACA CAGCCAACAC AGCCAACACA GCCAACACAG CCAACACCTC CGACCCAGCG
TCCTCCACCT TCCGCCGTCT CGCGCAACTC ATCAGCGCGT TCGAAGCGGG CGCCGTCGAC
GCATCCGCCC GCGAAAAACT GTCCGCGCAA GCCCAGGCAA AAGCAACCGC AACCCCCGTC
CTCGGCATCA CCGGAACCGG CGGCGCCGGC AAATCCTCGC TCACCGACGA GCTGATCCGA
CGCTTCCGCC TCGACTACGG CGACGCCCTC ACCATCGCCG TCCTCGCCAT CGATCCATCG
CGCCGCAAGT CCGGCGGCGC GTTGCTGGGC GACCGCATCC GCATGAACGC GATCGGTGAC
TGGGGCGGCG GCGCGCGCGT CTACATGCGT TCGATGGCAA CGCGCGAAGC GTCCAGCGAA
GTCTCCGACT CGCTGCCCGA TGCGCTCATG CTGTGCAAAG CGGCGGGCTT CGATCTGATC
GTGGTCGAAA CATCCGGCAT CGGTCAGGGC AATGCGGCGA TCGTGCCGTT CGTCGACGAA
TCGCTGTATG TCATGACGCC GGAGTTCGGC GCGGCCAGCC AATTGGAGAA GATCGACATG
CTTGACTTCG CCGGCTTCGT CGCGATCAAC AAGTTCGATC GGAAGGGCGC GCCGGACGCA
TTGCGCGACG TCGCCAAACA GGTGCAGCGC AATCGCGCCG ACTTCGCGAA GCCGCCGGAA
GCGATGCCGG TGTTCGGCAC GATCGCCTCG CGCTTTAACG ACGACGGCGT GACCGCGCTC
TACCGGCACG TCGCCGAAGC GCTTCGCAAG CACGGCTTGC GTTCAGGCGG CGGCCGTCTG
GCCGCGCCCG AAGGTCTGCG CTTTTCGAGC GGCCGCAACG CCATCGTGCC GCCGGCGCGG
GTGCGCTATC TGGCGGATAT CGCGCAGACG ATCCACGCTT ATCGCGAGCG AGCCGACGCA
CAAGCGCGTC TGGCGCGCGA GCGTTGGCAA CTTGTCGAGG CGCGCCGGAT GCTCGGCGAG
GCGGGTACAC AGGCCGGGGC TGTGACGCAA TCGCGGGCAA GCGCGAGTGG CAATTCGAGC
GGCAACCCGA ACGCTAACTC GGACGCCGAC TCGGACGCCG ACTCGGACGC CAACGCCAAC
GCCAACGCCA ACGCCAACGC CAACGCCAAC GCCAACGCCA ACGCCAACGC CAACGCCAAC
GCCAACGCCA ACGCCAACGC TAGCGCCAAC GCCAACAGCA ACCCAGACCC AAACTCAAAC
AAACATGCAC CAGCAAACGT CACCTCCGCC GACACCCCTT CGCCGCTTCA GCAACTCGAC
ACCCTGATCG CCCAACGCAC CGCCTCCCTC GGCGAACGCG AACGCGCGCT CCTCGACACC
TGGCCGCAGA CCGTCGCAGC CTATTCAGGC GCCGAACACA TCGTTCGCAT CCGCGACCGC
GAAATCCGCA CGGCACTCAC CGTCACGACA CTCTCCGGCT CAGAAGTCCG CAAAGTTTCC
CTGCCGAAAT TCGCCGATCA CGGCGAGATT CTGCGCTGGC TGATGCTCGA CAATCTGCCC
GGCTACTTCC CGTTCACCGC GGGCGTGTTC CCATTCCGCC GCGAAAACGA AGACCCGACG
CGGATGTTCG CTGGCGAAGG CGATCCGCAA CGCACCAATC GCCGCTTCAA GCTGCTCTCG
GAAGGTATGC CGGCCAAGCG CCTGTCGACC GCCTTCGATT CGGTCACGCT CTACGGCGAA
GAACCCGACG AGCGCCCCGA CATCTACGGC AAGGTGGGCA ATTCGGGCGT TTCGGTGGCG
ACGCTCGACG ACATGAAAAC GTTGTACGAC GGCTTCGATC TCTGTGCGCC GGAAACCTCG
GTCTCGATGA CGATCAACGG CCCCGCGCCG ACCATCCTCG CGATGTTCTT CAACGTCGCG
ATCGACCAGC AGATCGCGCG CATGACGCAG CAGCAAGGCC GACCGCTCAC GCACGACGAA
CTCTCCGCCA CGCGCCGCGC AGCGCTGGAA AACGTGCGCG GCACCGTGCA AGCCGACATC
CTGAAGGAAG ACCAAGGCCA GAACACCTGC ATCTTCTCGA CCGAATTCAG CCTGAAGGTG
ATGGGCGATA TACAGGCGTA CTTCGTCGAG CATGGTGTGC GCAATTTCTA TTCGGTGTCA
ATCTCCGGCT ATCACATTGC CGAGGCCGGC GCGAACCCGA TCTCGCAATT GGCCTACACG
CTCGCGAACG GCTTCACCTA TGTCGAGGCC TACCTCGCCC GCGGCATGTC GATCGACGAC
TTCGCGCCGA ATCTGTCATT CTTCTTTTCG AACGGCATGG ACCCGGAGTA CACGGTGCTG
GGCCGCGTCG CGCGACGCAT CTGGGCCGTC GCCATGCGCG AGCGCTACGG CGCGAACGAA
CGCAGCCAGA AGCTCAAATA TCACGTGCAG ACGTCGGGCC GCAGCCTGCA CGCGCAAGAG
ATCGACTTCA ACGATATCCG CACCACGCTG CAGGCGCTGA TCGCGATCTA CGACAACTGC
AATTCCCTAC ACACGAATGC CTTCGACGAA GCGATCACCA CGCCCACCGA AGATTCGGTG
CGCCGCGCGG TGGCGATCCA GTTGATCATC AACCGCGAAT GGGGACTCGC GAAGAATCAG
AATCCGAATC AGGGCAGTTT CGTGATCGAG GAACTGACGG ACCTCGTGGA AGAGGCTGTG
CTCGCCGAAT TCGACCGGCT GACCGAGCGC GGCGGCGTGC TCGGCGCGAT GGAAACCGGC
TATCAGCGCG GACGCATTCA GGACGAGTCG ATGTTGTACG AGCATCGCAA GCATGACGGC
TCGTATCCGA TCGTCGGCGT GAATACGTTT CTGAGCGCGC ATCCGCATGA AGCGCCGCAG
CCGATCGCGC TAGCCCGTTC CACCGACGAC GAAAAACAGA GTCAGTTGCA ACGTCTGCGC
GCTTTCCAGT CGCAGCATCG CGACGCGGCA CCGGCTGCGC TCGAACGCCT GAAGCGCGCG
GTGATCGACG ATGAAAACGT GTTTGCGGTG CTGATGGACG TCGTGCGTGT CTGCTCGCTC
GGGCAGATCA CGCACGCGTT GTTTGAAGTG GGCGGGCAGT ATCGCCGCAA TATGTAA
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| Protein sequence | MTDLSTPQRA GSHKLPAGRR LRFVTAAALF DGHDASINIM RRILQASGVE VIHLGHNRSV
DEVATAALQE DADGVAVSSY QGGHNEYFRY LVDLLRARGG ERIKVFGGGG GVIVPEEISE
LESYGVEKIY SPQDGQRLGL QGMIDDMIAR CAEGARAAEA VGQSRVGEWV DEFSKRGLPR
FDSRGDAGGD EDAVRNPFSQ ASHVGCATSV GHVANAADTA DAADTADTAD AADTADAADT
ADTADTADTA IAANTANTAN TANTANTANT ANTANTSDPA SSTFRRLAQL ISAFEAGAVD
ASAREKLSAQ AQAKATATPV LGITGTGGAG KSSLTDELIR RFRLDYGDAL TIAVLAIDPS
RRKSGGALLG DRIRMNAIGD WGGGARVYMR SMATREASSE VSDSLPDALM LCKAAGFDLI
VVETSGIGQG NAAIVPFVDE SLYVMTPEFG AASQLEKIDM LDFAGFVAIN KFDRKGAPDA
LRDVAKQVQR NRADFAKPPE AMPVFGTIAS RFNDDGVTAL YRHVAEALRK HGLRSGGGRL
AAPEGLRFSS GRNAIVPPAR VRYLADIAQT IHAYRERADA QARLARERWQ LVEARRMLGE
AGTQAGAVTQ SRASASGNSS GNPNANSDAD SDADSDANAN ANANANANAN ANANANANAN
ANANANASAN ANSNPDPNSN KHAPANVTSA DTPSPLQQLD TLIAQRTASL GERERALLDT
WPQTVAAYSG AEHIVRIRDR EIRTALTVTT LSGSEVRKVS LPKFADHGEI LRWLMLDNLP
GYFPFTAGVF PFRRENEDPT RMFAGEGDPQ RTNRRFKLLS EGMPAKRLST AFDSVTLYGE
EPDERPDIYG KVGNSGVSVA TLDDMKTLYD GFDLCAPETS VSMTINGPAP TILAMFFNVA
IDQQIARMTQ QQGRPLTHDE LSATRRAALE NVRGTVQADI LKEDQGQNTC IFSTEFSLKV
MGDIQAYFVE HGVRNFYSVS ISGYHIAEAG ANPISQLAYT LANGFTYVEA YLARGMSIDD
FAPNLSFFFS NGMDPEYTVL GRVARRIWAV AMRERYGANE RSQKLKYHVQ TSGRSLHAQE
IDFNDIRTTL QALIAIYDNC NSLHTNAFDE AITTPTEDSV RRAVAIQLII NREWGLAKNQ
NPNQGSFVIE ELTDLVEEAV LAEFDRLTER GGVLGAMETG YQRGRIQDES MLYEHRKHDG
SYPIVGVNTF LSAHPHEAPQ PIALARSTDD EKQSQLQRLR AFQSQHRDAA PAALERLKRA
VIDDENVFAV LMDVVRVCSL GQITHALFEV GGQYRRNM
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