| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0214 |
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| Symbol | |
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| ID | 5207149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 258739 |
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| End bp | 260412 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640593844 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001274600 |
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| Protein GI | 148654395 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATC CGCTTGCTGC TTTCCGTGAA GCCTACCAGG AATGGGAGCG CGCCATCCTC
CAACCGACGC TGCGACGTGC TCCTGAACGC GACGCCGATT TTACGACCGT GTCGGGTGAG
CCGATCAAGC GCCTGTACAC CCCGCTCGAC CTGGAGGGAA CCGACCCGGT GCGCGACATC
GGGTTGCCGG GCGCCTATCC GTTCACGCGC GGCATCCATC CCACCGGGTA CCGGGGCAAA
CTCTGGACGA TGCGCATGTT TGCCGGCTTT GGCAGCGCCG AGGAAACCAA TGCGCGCTTC
CGCTATCTGC TCGAACAGGG ACAGACCGGG CTTTCGATCG CGTTCGATAT GCCGACGCTC
TACGGGCGTG ATACCGACGA TCCGCTGGTG CCCGGCGAGT TCGGCAAGTG TGGCGTGGCA
GTCTCCTCGC TTGCCGATAT GGAGATACTG CTCGATGGGT TGCCGCTCGA TCAGATCAGC
ACCTCGATGA CGATCAACTC ACCGGCTGCG ATTATCTGGG CGATGTACCT GGTGGTGGCG
GAGAAGCGCG GCATTCCCTG GAGCCAGTTG CGCGGCACGC TTCAGAACGA TATTCTGAAG
GAATACATCG CCCAGAACGA GTATATCTTC CCGCCCGAAC CATCGATGCG TCTGGTCGTC
GATACGATCG AGTTCTCCAC CCGCCATGTG CCACAGTGGA ATCCGGTCTC GATCAGCGGC
TATCACATCC GTGAAGCGGG CGCAACTGCC GCCCAGGAAC TGGCGTTCAC CCTCGCCGAT
GGGCTGGCAT ATGTCCAGGC GAGTGTCGAA CGCGGGTTGC ATGTCGATGA ATTCGCGCCA
CGGCTCAGCT TCTTCTTCAA CGCGCACAAC GATCTGTTTG AGGAAGTGGC GAAATACCGC
GCCGCCCGAC GCATCTGGGC GCGCACGCTG CGTGAGCGGT TCGGGGCGCA GAATCCGCGC
TCCCTCTGGT TGCGCTTCCA CGCACAAACG GCAGGATGCT CGCTCACGGC GCAGCAGCCG
GAGAATAACA TCGTTCGCAC TGCCATCCAG GCGCTCGCCG CCATCCTCGG CGGGTGTCAG
TCGCTCCACA CCAATTCGAT GGACGAAGCG CTGGCGCTCC CCTCCGAAAA AGCCGTCACC
ATCGCTCTGC GCACCCAACA GATCATTGCT GAGGAGAGCG GCGTCGCCAA TACGGTCGAT
CCGCTCGGCG GCTCGTACTT TGTCGAAGCG TTGACCAACC GGATGGAAGA GGAATGCCTT
GCCTACTTCC GTCGAATCGA GGATCTCGGC GGAGTCATTC CCGCGATCCG GCGTGGCTTC
TTCCAATCTG AGATCGCCGA TGCCGCCTAC CGGTATCAGC GCGAGATCGA CTCTGGACGA
CGCGGCGTGA TCGGCGTCAA CCGGTATGCG ATCAAAACCC CGCTCGAAAT CCCGATCCTC
GAAATGGATC CGCACGGCGA GGCGCGTCAC CTGGAGCGGT TGAACCGCGT GCGCGCCACC
CGCGATAACG CGCTCGTGAA GCGGCGTCTC GAAGCGCTGC GCGAAGCGGC GCTGGGAACA
GAGAACCTGA TGCCGCCGAT CCTCGACTGT GTGCGCGCAT ACGCCACGAT TGGCGAAATG
TGCGACGTGC TGCGCGATGT GTTTGGTGTG TACCGCGAAA TGGTTGTGGT GTAA
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| Protein sequence | MSDPLAAFRE AYQEWERAIL QPTLRRAPER DADFTTVSGE PIKRLYTPLD LEGTDPVRDI
GLPGAYPFTR GIHPTGYRGK LWTMRMFAGF GSAEETNARF RYLLEQGQTG LSIAFDMPTL
YGRDTDDPLV PGEFGKCGVA VSSLADMEIL LDGLPLDQIS TSMTINSPAA IIWAMYLVVA
EKRGIPWSQL RGTLQNDILK EYIAQNEYIF PPEPSMRLVV DTIEFSTRHV PQWNPVSISG
YHIREAGATA AQELAFTLAD GLAYVQASVE RGLHVDEFAP RLSFFFNAHN DLFEEVAKYR
AARRIWARTL RERFGAQNPR SLWLRFHAQT AGCSLTAQQP ENNIVRTAIQ ALAAILGGCQ
SLHTNSMDEA LALPSEKAVT IALRTQQIIA EESGVANTVD PLGGSYFVEA LTNRMEEECL
AYFRRIEDLG GVIPAIRRGF FQSEIADAAY RYQREIDSGR RGVIGVNRYA IKTPLEIPIL
EMDPHGEARH LERLNRVRAT RDNALVKRRL EALREAALGT ENLMPPILDC VRAYATIGEM
CDVLRDVFGV YREMVVV
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