| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1182 |
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| Symbol | |
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| ID | 7400991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1186562 |
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| End bp | 1188262 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643708247 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_002565846 |
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| Protein GI | 222479609 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000166 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACGACG ACGAGGAGCT CTCCGAGATC CGCGAGGCTC ACGCCGAGTG GGAGGCGGAG
ACGCTCGATC CGACCCTCGA CCGACACGGC GAGCGGAGAG ACCGGTTCGC GACGGTGTCG
AACCACGAGG TCGATCGGTT ATACACCCCC GCCGACGTGG CCGACATCGA CTACGAGGAG
GATCTCGGAT TCCCGGGCGA GGAGCCGTAC ACGCGGGGCG TCTACCCGAC GATGCACCGC
GGACGGACGT GGACGATGCG GCAGTTCGCC GGGTTCGGCA CCGCCGAGGA GACGAACGAG
CGGTTCCACT ATCTGACCGA TGAGGGGCAG ACCGGGCTCT CGACCGCCTT CGACATGCCC
TCGCTGATGG GGCTCGACTC CGACGACCCG ATGTCGCTCG GTGAGGTCGG CAGGGAGGGC
GTCGCCGTCG ACACCCTCCG AGACATGGAG GTGCTGTTCG ACGGTATCGA CGTAGGCGAG
GTCTCGACCT CCTTCACGAT CAACCCCAGC GCGCCCGTGA TCTACGCGAT GTACGTCGCC
ATCGCGGACC AACAGGGCGT GCCGCGCGAG GAGCTTCGCG GCACCCTCCA AAACGACATG
CTCAAGGAGT TCATCGCGCA GAAGGAGTGG GTGATCCCCC CGGAGCCCTC CCTCGATCTC
GTGACTGACA CCATCGAGTT CGCGGTCGAA GAGACGCCCA AGTTCAAACC CATCTCGGTA
TCGGGGTATC ACATCCGCGA GGCGGGGTCG ACGGCGGTTC AAGAACTCGC CTTCACCCTC
GCCGACGGGT TCGCGTACGT CGAGGACTGC CTCGATCGCG GGCTCGACGT CGACGAGTTC
GCCCCGCAGC TCTCCTTCTT CTTCAACTCG CACAACTCCA TCTTCGAGGA GGTGGCGAAG
TTCCGCGCCG CCCGCCGGAT CTACGCGCGG GTCATGGACG AGTGGTACGG CGCCGAGGCC
GACGCCGCCA AACAGCTCAA GTTCCACACC CAGACCGCTG GCCAGTCGCT GACGGCCCAG
CAGCCTTTAA ATAACGTCGT GCGGGTCACG ATTCAGGCGC TGGCGGGCGT GCTCGGTGGC
ACCCAGAGCC TCCACACCAA CTCCTTCGAC GAGGCGCTGG CGCTGCCCTC CGAGCAGGCG
GTCCGGGTCG CGCTCCGCAC CCAGCAGATC ATCGCCGAGG AGTCGGGCGC GGCCGACATC
GTCGACCCGC TCGGCGGCTC CTTCGCGGTG GAGGCGCTCA CCGACGAGGT CGAGGCGGAG
GCGACGGCGT ACATCGAGGA GATCAAGGAC ATGGGCGACG GGTCGGTCCG CGACGGGGTC
CTCCACGGAA TCGACGAGGG GTACTTCCAC CGCGAGATCC AGCAGGCCTC CTACGAGTAC
CAAGAGCGCG TCGACAGCGG TGACGAAACC GTGGTCGGCG TCAACGCCTA CGAGATCGAC
CCGGAGACGG AGCCCGACCT GCTCCGCGTC GACGAGACGA CTCGTGAACG CCAGCTCGAT
CGGCTCGAAT CGGTGAAGGC TGAGCGCGAC GACGACGCGG TCGAGGCGGC CCTCGACGAT
CTACGGGCGG CGATCGACGC CGACGAGAAC GTGATGCCGG CGATCGTCAC GGCGGTGAAA
GCGTATGCGA CGATGGGCGA GATCATGGCG GTGTTCGAGG CGGAACACGG GACCTACCGC
GAGCGGATCG GTGTCGCTTA A
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| Protein sequence | MYDDEELSEI REAHAEWEAE TLDPTLDRHG ERRDRFATVS NHEVDRLYTP ADVADIDYEE
DLGFPGEEPY TRGVYPTMHR GRTWTMRQFA GFGTAEETNE RFHYLTDEGQ TGLSTAFDMP
SLMGLDSDDP MSLGEVGREG VAVDTLRDME VLFDGIDVGE VSTSFTINPS APVIYAMYVA
IADQQGVPRE ELRGTLQNDM LKEFIAQKEW VIPPEPSLDL VTDTIEFAVE ETPKFKPISV
SGYHIREAGS TAVQELAFTL ADGFAYVEDC LDRGLDVDEF APQLSFFFNS HNSIFEEVAK
FRAARRIYAR VMDEWYGAEA DAAKQLKFHT QTAGQSLTAQ QPLNNVVRVT IQALAGVLGG
TQSLHTNSFD EALALPSEQA VRVALRTQQI IAEESGAADI VDPLGGSFAV EALTDEVEAE
ATAYIEEIKD MGDGSVRDGV LHGIDEGYFH REIQQASYEY QERVDSGDET VVGVNAYEID
PETEPDLLRV DETTRERQLD RLESVKAERD DDAVEAALDD LRAAIDADEN VMPAIVTAVK
AYATMGEIMA VFEAEHGTYR ERIGVA
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