| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1909 |
|---|
| Symbol | |
|---|
| ID | 8428888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 2020055 |
|---|
| End bp | 2021737 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645034239 |
|---|
| Product | methylmalonyl-CoA mutase, large subunit |
|---|
| Protein accession | YP_003191373 |
|---|
| Protein GI | 258515151 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
|---|
| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.699759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.051216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTACTG AAGATTTAGT AAAAAAGTCA AGTGGATTAA GACAAAAATG GGAAGATGAA
GTTAAAAAAA TAGTTGCTAA ACACTCTGAC CAAAAAGAAA ATTGGACCAC GGTTTCTGAT
TTAGGTATCA AGAGAATATA TGGTCCAGAG GACATTAAAG ATATGGATTT TGAGAGGGAT
ATAGCTTATC CGGGACAATA TCCATATTTG AGAGGCTGCC AGCCAACCGG TTATCGTGGA
AAATACTGGA CCTTTAGAAT GTTTTCCGGC ATGGGTACAG CTGTCGAAAC TAACAAGCGC
TGGCATTACC TGTTAGCTAC CGGACAGACC GGTCTGAGTA CAGCTTTTGA TTTCCCAACG
CTTATGGGTT ATGATACTGA TTCTCCCAAA GCCAAGGGTG AGTGTGGAAA AGTTGGGGTA
GCTATTGATA CTATCGAAGA TTTTAGAGAT TTGATTCAAG GGATTCCTTT GGATAAAATA
ACCACCTCGA TGACAATTAA TCCTCCTGCT ACTATATTAT GGGCCATGTA CATTGCCTGT
GCGCAGCAGC AGGGAATTCC CCTCAATAAA ATCGGCGGTA CCATTCAAAA TGATATGTTA
AAAGAATTTA TTGCCCAGAA AACCTTTATG TGCCCGCCTG AGCCGTCAGT AAAATTAATC
AGCGATACCA TTGAGTTTGG TACCAAATAT GTTCCTAAAT GGAATACCGT TAGCATCAGC
GGCTATCACA TCAGAGAAGC CGGATCAACC GCTGTACAGG AACTGGCCTT CACTTTAAGA
GATGGTATGG AATATGTAGA GGATGTTATT AGACGTAAAG GCTTGCAGGT TGATGAATTT
GCTCCCAGAT TATCCTTCTT CTTTAACGCA CATATTGATT TCTTTGAAGA AATTGCTAAG
TTAAGAGCTG CACGCAGGAT CTGGTCTAAA GCAATGCGTG AACGTTATGG TGCTAAGGAC
CCTCGTTCCT TGTGGATGAG ATTCCATACC CAGACTGCCG GTTGTTCACT TACTGCCCAG
CAGCCCTACA ACAACGTGGT TAGGACTGCT ATTGAAGCAC TGGCCGGTGT TCTCGGCGGT
ACTCAGTCAC TGCACACCAA CTCACTGGAC GAGGTTCTGT GCCTGCCTTC AGACCATGCA
GTGCAAATTG CTTTACGGAC CCAGCAGATT ATCGCTGAAG AAACAGGTGT TGCAAACACT
ATTGACCCGT TGGCCGGTTC ATATTTCGTA GAAGCGCTGA CTAATGAAAT GGAAGAAAAA
GCTTGGGAAT ACATTCATAA GATCGACGAT ATGGGTGGTA TGGTTGCCGC TATCGAAAAA
GGCTTCCCTC AGTTGGAAAT TTCCGATGCC TCCTATAAAT TCCAAAAGCA AATCGATGCT
CAGGAGAAAA TCATGATCGG TGTAAACAAG TACGTTCAGG AGGATGAACA AGTTGACATT
CCTATAGTGG AAATTGATGA CTCTATTGAA GCTGAACAAT TAAAGCGTCT AGCCGAGGTT
AAGAGAAAGC GTGACGGCCG TAAAGTGGCC GAAACACTTA AAGATATCGC CGTTGCTTGT
AAAAAAGGCG AAAATGTTAT GCCTTATTGT ATTGAGGCAG TTAAAAACTA TGCTACTGTT
CAGGAAATCT GTGATGTTTA CAGAGAAGTT TATGGTGAGT ATCGCGACCC TGGCATTTAC
TAA
|
|---|
| Protein sequence | MITEDLVKKS SGLRQKWEDE VKKIVAKHSD QKENWTTVSD LGIKRIYGPE DIKDMDFERD
IAYPGQYPYL RGCQPTGYRG KYWTFRMFSG MGTAVETNKR WHYLLATGQT GLSTAFDFPT
LMGYDTDSPK AKGECGKVGV AIDTIEDFRD LIQGIPLDKI TTSMTINPPA TILWAMYIAC
AQQQGIPLNK IGGTIQNDML KEFIAQKTFM CPPEPSVKLI SDTIEFGTKY VPKWNTVSIS
GYHIREAGST AVQELAFTLR DGMEYVEDVI RRKGLQVDEF APRLSFFFNA HIDFFEEIAK
LRAARRIWSK AMRERYGAKD PRSLWMRFHT QTAGCSLTAQ QPYNNVVRTA IEALAGVLGG
TQSLHTNSLD EVLCLPSDHA VQIALRTQQI IAEETGVANT IDPLAGSYFV EALTNEMEEK
AWEYIHKIDD MGGMVAAIEK GFPQLEISDA SYKFQKQIDA QEKIMIGVNK YVQEDEQVDI
PIVEIDDSIE AEQLKRLAEV KRKRDGRKVA ETLKDIAVAC KKGENVMPYC IEAVKNYATV
QEICDVYREV YGEYRDPGIY
|
|---|
| |