Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0458 |
Symbol | |
ID | 4460267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 551416 |
End bp | 553095 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701214 |
Product | methylmalonyl-CoA mutase, large subunit |
Protein accession | YP_844593 |
Protein GI | 116747906 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.484451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.420898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGACG AAAAAGCACT ACAGAAAATC AAAGCTGGCA AGGACAAGTG GGAACAGGGA ACTGTCGCCA AGACACTCGC CAAATCACCC GAGAGCAAGA AGGAATTCAC CACCATCTCA GGCGCTCCCG TGGAACGGCT GTACACCCCT GCCGATGTCG CCGGGATCGA CTACGAGAAG CACATCGGCT TCCCCGGCGA ATTTCCCTTC ACCCGCGGTG TCCAGCCGAC CATGTATCGG GGCCGTTACT GGACCATGCG GCAGTACGCA GGGTTCGGCA GCGCCAAGGA CACCAACGCC CGCTACCGTT ACCTGCTGCA GCAGGGCCAG ACGGGTCTGA GCGTTGCTTT CCATCTGCCC ACCCAGGCCG GATACGACAG CGACCATCCC CTGTCCATGG GTGAAGTCGG AAAGGTGGGC GTGGCCATCG ACTCGATCGA GGATTTGAAG GTGCTCTTCA ACGGCATCCC CCTCGACAAG GTGACCACCT CCATGACCAT CAATGCGGCC GCCACCGTGC TTCTCGGCAT GTACCTGGCC ATCGCCGAAG AGCAGGGAGT GCCTTACGAC AAAGTGGGCG GAACCGTGCA GAACGACGTG CTCAAGGAAA TCATCTGCCG CGGTCAGTAC ATTTATCCTC CCAAGCCCAC CATGCGGTTG ACCGTCGACC TGATCGAGTT CGCCCAGAAG TTCGTGCCCC GCTGGAACTC CATCAGCATC AGCGGCTACC ACATCAGGGA ATCCGGCTCG ACGGCCGCCC AGGAGATCGC GTTCACCCTC GCGGACGGCA TCGCCTACGC GCAGGCGTGC ATGGATCGGG GCATTCCCGT CGATGCATTC GCAGGACGTT TGAGCTTCTT CTTCAACGCT TTCACCAACG TGCTCGAGGA AGTGGCGAAG TTCCGCGCGG CTCGCAGGTG CTGGGCGAAG ATCATGAAGG AGCGTTTCGG TGCAAAGGAT CCGCGCAGCA TGATGTTGCG TTACCACGTG CAGACCGGCG GCGTGACGCT GACCGCTCAG CAGCCGCTCA ACAACATCGT CCGTGTCGGC CTCCAGACCT ATGCCACCGC CCTCGGCGGA GCACAGTCGC TGCACACCAA CTCGTACGAC GAAGCCCTGT GTCTGCCGAC CCAGCAGGCC GTTACCGTGG CTCTGCGCAC GCAGCAGATC GTCGCCGAGG AAAGCGGTGC CACCGACACC ATCGATCCTT TGGCCGGGTG CTACTATGTC GAGGCAATGA CGGACAAGAT CGAGGCGGAA GTCCACGAGT ACATCAAGAA GATCGACGCC ATCGGCGGGA CCCTGTCCGC CATCGAGCAA GGCTACATCC AGAAGGAAAT CCAGAACAGC TCCTACCGCT TCCAGAAAGA AATCGAGAAC AACGAGCGGG TATACGTGGG CATCAACAAG TACACCATGG AAGAACCGCC TCCCGAGGGT CTCTTGAAGG TGGATATGTC CGTTGGCGAA GTCGAAGCCG CCAAGCTCAA AAAACTCCGT GCCACCAGAG ATCAGGCCAA GTGGAAAGCT GCGTTGGACA AGCTGAAGAA AGTCTCCCAG ACAGACGAGA ACGTCATGCC GACCGTCATC GAGGCGGTGA AGGCCAAGGC CACCGTCGGA GAAATCTGCG ACGTATGGCG GGAAGTTTTC GGCGAGTATC GTCCAAAAGA ATTCGTCTAA
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Protein sequence | MFDEKALQKI KAGKDKWEQG TVAKTLAKSP ESKKEFTTIS GAPVERLYTP ADVAGIDYEK HIGFPGEFPF TRGVQPTMYR GRYWTMRQYA GFGSAKDTNA RYRYLLQQGQ TGLSVAFHLP TQAGYDSDHP LSMGEVGKVG VAIDSIEDLK VLFNGIPLDK VTTSMTINAA ATVLLGMYLA IAEEQGVPYD KVGGTVQNDV LKEIICRGQY IYPPKPTMRL TVDLIEFAQK FVPRWNSISI SGYHIRESGS TAAQEIAFTL ADGIAYAQAC MDRGIPVDAF AGRLSFFFNA FTNVLEEVAK FRAARRCWAK IMKERFGAKD PRSMMLRYHV QTGGVTLTAQ QPLNNIVRVG LQTYATALGG AQSLHTNSYD EALCLPTQQA VTVALRTQQI VAEESGATDT IDPLAGCYYV EAMTDKIEAE VHEYIKKIDA IGGTLSAIEQ GYIQKEIQNS SYRFQKEIEN NERVYVGINK YTMEEPPPEG LLKVDMSVGE VEAAKLKKLR ATRDQAKWKA ALDKLKKVSQ TDENVMPTVI EAVKAKATVG EICDVWREVF GEYRPKEFV
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