| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4310 |
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| Symbol | |
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| ID | 5672665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5148085 |
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| End bp | 5149662 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243183 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001508600 |
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| Protein GI | 158316092 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.57946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT CTGTCCAGAC CAACTCCGGC CTGCCGGTGG AGCCGGTGTA CGGGCCGGCG
GACCGCGGCA CCGAACCGCC CGCGCCGGGC AAGTTTCCGT TCACCCGCGG CAACTACGCC
TCCGGGTACC GCGGGCGCAC GTGGACGTTC CGCCAGTACT CCGGCTTCGG CACCGCCGAG
GAGTCCAACA ACCGCTACCG CTACCTGCTC GAGCAGGGCG GCACGGGCCT GTCGGTGGCC
CTCGACCTGC CCACCCAGTG CGGGTACGAC TCCGACGACC CGGAGGTGAC CGAGGAGGTC
GGCCGGGTCG GCGTCGCCGT CGACACGCTC GCCGACGCCG AGGTGCTCTT CGAGGGCATC
CCGCTGGACA AGATCAGCAC CAGCTTCACG ATCAACGGCA CCGCCGCGAT CCTGCTGGCC
TTCTACGTGG CGGCCGCGGA GCGCTCCGGG GTGCCCCGGG CCAAGCTGAC CGGGACGATC
CAGAACGACA TCCTCAAGGA GTACGCCTCC CGCGGGACGT GGATCTGGCC GCCGGAGCCG
TCGCTGCGCC TGATCGCCGA CACCATCGAG TTCTGCGCCG AGGAGGTGCC GCGCTTCAAC
GCGATCTCCG TGGCCGGCGC GCACTTCCGG GACGCCGGCG CGAACGCGGT ACAGGAGATG
GCGTTCACCC TCGCCGACGG CGTCACCTAC TGCGACACGG TGATCGAGCG CGGTCGGCTG
TCGATCGAGA AGTTCGCGCC GCAGGTGTCG TTCTTCTTCT ACACCCACGG CGACTTCTTC
GAGGAGATCG CCAAGTACCG GGCGGGCCGG CGGCGGTGGG CGACCATCGT CCGGGAGCGC
TACGGCGCCA CCGCCGACAA GGCGTCGATG TTCCGCTTCG GCTGCGTGGC CGGCGGGGCG
TCGCTGTACG CGCCGCAGGC GCAGAACAAC ATCGTCCGGG TCGCCTACGA GGCGATGGCC
TCGGTGCTCG GCGGCGTGCA GTCGATGTTC ACCGCGGCCT GGGACGAGCC GTTCGCGCTG
CCCAGCGAGG AGTCGGCGAC GCTCGCGCTG CGCACCCAGC AGATCCTCGC CTACGAGACG
GGGGTGACCC GCACCGCCGA CCCGCTGGGC GGCTCGTACT TCGTCGAGGC GCTCACCGAC
GCCACCGAGG CCCGCATCAT CGAGATCATG GACGACCTCG AGCAGCACGG CGGCATGGTC
CGCGCGATCG AGGACGGCTA CCTCCAGGGC ATGATCGCCG ACGAGGCGTA CCAGCTGCAC
CAGGACATCG AGAGCGGAAA GGTGCCGATC GTCGGCGTGA ACCGGTTCGT CTCCGACGAG
CCGGCGCCCG ACCTCGCCAC CTACGAACTG GACGCCGAAG GCCGCGAGCG GCAGCTGAAG
CGGCTGGCGA AGGTCAAGGG CGAGCGCGAC GCCGCGGCCG TCCGGGCCAG CCTCGACGCG
CTGGCCCGCG CCGCGGAGGG GAACGGGAAC CTGATGCACA ACCTGATCGA CTGCGCCAAC
GCCTACTGCA CGGTGGGCGA GATGGTCGCC ACCCTCAAGA ACGTCTGGGG CGAGTTCCAG
CAGCCGGTGG TGTTCTGA
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| Protein sequence | MSDSVQTNSG LPVEPVYGPA DRGTEPPAPG KFPFTRGNYA SGYRGRTWTF RQYSGFGTAE
ESNNRYRYLL EQGGTGLSVA LDLPTQCGYD SDDPEVTEEV GRVGVAVDTL ADAEVLFEGI
PLDKISTSFT INGTAAILLA FYVAAAERSG VPRAKLTGTI QNDILKEYAS RGTWIWPPEP
SLRLIADTIE FCAEEVPRFN AISVAGAHFR DAGANAVQEM AFTLADGVTY CDTVIERGRL
SIEKFAPQVS FFFYTHGDFF EEIAKYRAGR RRWATIVRER YGATADKASM FRFGCVAGGA
SLYAPQAQNN IVRVAYEAMA SVLGGVQSMF TAAWDEPFAL PSEESATLAL RTQQILAYET
GVTRTADPLG GSYFVEALTD ATEARIIEIM DDLEQHGGMV RAIEDGYLQG MIADEAYQLH
QDIESGKVPI VGVNRFVSDE PAPDLATYEL DAEGRERQLK RLAKVKGERD AAAVRASLDA
LARAAEGNGN LMHNLIDCAN AYCTVGEMVA TLKNVWGEFQ QPVVF
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