More than 300 homologs were found in PanDaTox collection
for query gene Mboo_2365 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009712  Mboo_2365  response regulator receiver protein  100 
 
 		 221 aa  452  1.0000000000000001e-126  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.878823  normal  1 
 
 
-
 
NC_009712  Mboo_1937  response regulator receiver protein  61.76 
 
 		 209 aa  264  8e-70  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.224265  normal  1 
 
 
-
 
NC_011832  Mpal_2156  response regulator receiver protein  56.25 
 
 		 212 aa  240  1e-62  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
-
 
NC_009051  Memar_0295  response regulator receiver protein  54.37 
 
 		 211 aa  238  4e-62  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_009051  Memar_0309  response regulator receiver protein  54.37 
 
 		 211 aa  238  4e-62  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_1618  response regulator receiver domain-containing protein  50 
 
 		 208 aa  214  9.999999999999999e-55  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_009712  Mboo_1936  response regulator receiver protein  42.65 
 
 		 221 aa  173  9.999999999999999e-43  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.941096  normal  1 
 
 
-
 
NC_009712  Mboo_1478  response regulator receiver protein  44.79 
 
 		 426 aa  158  5e-38  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.274981  normal  1 
 
 
-
 
NC_009712  Mboo_0965  response regulator receiver protein  40.74 
 
 		 411 aa  157  2e-37  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.656429  normal  0.215977 
 
 
-
 
NC_007796  Mhun_1472  response regulator receiver domain-containing protein  37.67 
 
 		 216 aa  128  8.000000000000001e-29  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_2157  response regulator receiver protein  38.97 
 
 		 140 aa  113  2.0000000000000002e-24  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
-
 
NC_007796  Mhun_1613  response regulator receiver domain-containing protein  33.17 
 
 		 211 aa  108  5e-23  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_007796  Mhun_2638  response regulator receiver domain-containing protein  30.27 
 
 		 220 aa  97.1  2e-19  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  42.37 
 
 		 237 aa  84.3  0.000000000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  42.5 
 
 		 391 aa  84  0.000000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  40.5 
 
 		 367 aa  84  0.000000000000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_2522  two component transcriptional regulator, winged helix family  31.46 
 
 		 226 aa  82.4  0.000000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_1278  sensory box protein/response regulator  35.59 
 
 		 705 aa  82  0.000000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.517683  n/a   
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  35.54 
 
 		 231 aa  82  0.000000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal  1 
 
 
-
 
NC_002978  WD0221  response regulator PleD  32.65 
 
 		 460 aa  81.3  0.00000000000001  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_1656  response regulator receiver protein  36.92 
 
 		 166 aa  81.3  0.00000000000001  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_007577  PMT9312_0171  two component LuxR family transcriptional regulator  32.16 
 
 		 242 aa  81.3  0.00000000000001  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  37.5 
 
 		 326 aa  81.3  0.00000000000001  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_1098  PAS:GGDEF  33.9 
 
 		 705 aa  80.9  0.00000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  33.82 
 
 		 231 aa  80.5  0.00000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_009091  P9301_01891  two-component response regulator  33.12 
 
 		 242 aa  80.5  0.00000000000002  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.991625  n/a   
 
 
-
 
NC_008816  A9601_01871  two-component response regulator  31.58 
 
 		 242 aa  79.7  0.00000000000003  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.528311  n/a   
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  37.5 
 
 		 326 aa  80.1  0.00000000000003  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.402703 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  31.95 
 
 		 488 aa  79.3  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.182398 
 
 
-
 
NC_009051  Memar_2024  response regulator receiver protein  34.56 
 
 		 136 aa  79  0.00000000000005  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  33.12 
 
 		 236 aa  79  0.00000000000005  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  36.07 
 
 		 170 aa  78.6  0.00000000000008  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  32.82 
 
 		 339 aa  77.8  0.0000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2404  response regulator receiver protein  39.5 
 
 		 119 aa  77.4  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.190427 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  35.59 
 
 		 230 aa  77.8  0.0000000000001  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  32.26 
 
 		 231 aa  77.4  0.0000000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008817  P9515_01981  two-component response regulator  32.48 
 
 		 242 aa  77.8  0.0000000000001  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.125891  n/a   
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  35.21 
 
 		 225 aa  77.8  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  33.33 
 
 		 224 aa  77.4  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  36.13 
 
 		 236 aa  77  0.0000000000002  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  36.72 
 
 		 230 aa  77  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  35.38 
 
 		 237 aa  77  0.0000000000002  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  36.03 
 
 		 235 aa  77  0.0000000000002  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_010655  Amuc_1110  two component transcriptional regulator, winged helix family  33.88 
 
 		 234 aa  76.3  0.0000000000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  31.9 
 
 		 222 aa  76.3  0.0000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  37.5 
 
 		 305 aa  76.3  0.0000000000003  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  34.39 
 
 		 278 aa  76.6  0.0000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A2406  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.64 
 
 		 1301 aa  76.6  0.0000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  28.51 
 
 		 339 aa  76.6  0.0000000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  31.62 
 
 		 232 aa  76.6  0.0000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_013061  Phep_0587  ATP-binding region ATPase domain protein  35.51 
 
 		 1161 aa  75.9  0.0000000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0719  multi-sensor signal transduction histidine kinase  36.84 
 
 		 531 aa  76.3  0.0000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  32.5 
 
 		 228 aa  75.9  0.0000000000004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_23040  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  33.33 
 
 		 229 aa  75.9  0.0000000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.318653  normal  1 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  34.85 
 
 		 236 aa  75.9  0.0000000000004  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.0000906935 
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  36.29 
 
 		 230 aa  75.5  0.0000000000005  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_011729  PCC7424_3000  response regulator receiver protein  31.45 
 
 		 124 aa  75.5  0.0000000000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  40 
 
 		 377 aa  75.5  0.0000000000005  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  36.29 
 
 		 230 aa  75.9  0.0000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_2180  two component transcriptional regulator  32.54 
 
 		 235 aa  75.9  0.0000000000005  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.0753297 
 
 
-
 
NC_007347  Reut_A2162  phosphate regulon transcriptional regulatory protein phoB  32.54 
 
 		 235 aa  75.5  0.0000000000006  Ralstonia eutropha JMP134  Bacteria  normal  0.308703  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  29.75 
 
 		 338 aa  75.1  0.0000000000007  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  29.75 
 
 		 338 aa  75.1  0.0000000000007  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5381  two component transcriptional regulator, winged helix family  37.19 
 
 		 235 aa  75.1  0.0000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.0242785  normal  1 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  29.75 
 
 		 338 aa  75.1  0.0000000000008  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_1901  response regulator receiver protein  31.9 
 
 		 125 aa  74.7  0.0000000000009  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1740  two component transcriptional regulator, winged helix family  33.06 
 
 		 225 aa  75.1  0.0000000000009  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000204942  n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  33.52 
 
 		 338 aa  75.1  0.0000000000009  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  33.05 
 
 		 232 aa  74.7  0.000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  34.15 
 
 		 1131 aa  74.3  0.000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.257486 
 
 
-
 
NC_007643  Rru_A2929  two component transcriptional regulator  38.17 
 
 		 250 aa  74.3  0.000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.449606  n/a   
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  37.3 
 
 		 361 aa  74.3  0.000000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal  1 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  28.26 
 
 		 339 aa  74.3  0.000000000001  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  36.57 
 
 		 396 aa  74.3  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  33.8 
 
 		 225 aa  74.3  0.000000000001  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008340  Mlg_2429  response regulator receiver modulated metal dependent phosphohydrolase  35.51 
 
 		 480 aa  74.3  0.000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.129673 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  36.36 
 
 		 225 aa  73.9  0.000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1658  two component transcriptional regulator, winged helix family  33.05 
 
 		 230 aa  73.9  0.000000000002  Clostridium cellulolyticum H10  Bacteria  normal  0.515101  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  28.31 
 
 		 236 aa  73.9  0.000000000002  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  33.59 
 
 		 232 aa  73.6  0.000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  36.36 
 
 		 348 aa  73.6  0.000000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_007604  Synpcc7942_1860  two component LuxR family transcriptional regulator  32.54 
 
 		 235 aa  73.6  0.000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007953  Bxe_C1381  two component heavy metal response transcriptional regulator  36.67 
 
 		 224 aa  73.6  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.961918 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  33.1 
 
 		 397 aa  73.6  0.000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.543575 
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  36.54 
 
 		 312 aa  73.6  0.000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1679  two component transcriptional regulator  36.36 
 
 		 224 aa  73.6  0.000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_3248  response regulator receiver protein  34.68 
 
 		 121 aa  73.6  0.000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.500247 
 
 
-
 
NC_008312  Tery_4937  two component transcriptional regulator  33.57 
 
 		 257 aa  73.9  0.000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.565868 
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  33.33 
 
 		 225 aa  73.6  0.000000000002  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  35.2 
 
 		 235 aa  74.3  0.000000000002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  36.54 
 
 		 312 aa  73.6  0.000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  36.54 
 
 		 312 aa  73.6  0.000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.917296 
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  36.57 
 
 		 396 aa  73.2  0.000000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_009952  Dshi_2820  response regulator  35.9 
 
 		 462 aa  73.2  0.000000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.229785  normal  0.330149 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  32.69 
 
 		 553 aa  73.2  0.000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.914679 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  37.29 
 
 		 237 aa  73.2  0.000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  34.56 
 
 		 407 aa  73.2  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_007796  Mhun_0886  response regulator receiver domain-containing protein  34.26 
 
 		 137 aa  73.2  0.000000000003  Methanospirillum hungatei JF-1  Archaea  normal  0.384988  normal  0.153587 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  32.79 
 
 		 226 aa  73.2  0.000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1449  two component transcriptional regulator  33.88 
 
 		 246 aa  73.6  0.000000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  0.566781  normal  1 
 
 
-
 
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