More than 300 homologs were found in PanDaTox collection
for query gene Strop_1873 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009380  Strop_1873  response regulator receiver  100 
 
 		 326 aa  645    Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.402703 
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  94.48 
 
 		 326 aa  607  9.999999999999999e-173  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2593  response regulator receiver modulated diguanylate cyclase  56.41 
 
 		 340 aa  346  3e-94  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.483  normal  0.196753 
 
 
-
 
NC_008578  Acel_1275  response regulator receiver modulated diguanylate cyclase  52.3 
 
 		 304 aa  313  1.9999999999999998e-84  Acidothermus cellulolyticus 11B  Bacteria  hitchhiker  0.00827298  normal  0.435617 
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  41.83 
 
 		 310 aa  242  7e-63  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_010320  Teth514_2061  response regulator receiver modulated diguanylate cyclase  39.87 
 
 		 318 aa  239  5e-62  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000000365539  n/a   
 
 
-
 
NC_009767  Rcas_3221  response regulator receiver modulated diguanylate cyclase  42.26 
 
 		 443 aa  233  2.0000000000000002e-60  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0497788 
 
 
-
 
NC_009523  RoseRS_3924  response regulator receiver modulated diguanylate cyclase  40.13 
 
 		 443 aa  229  5e-59  Roseiflexus sp. RS-1  Bacteria  normal  0.350169  normal  1 
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  39.02 
 
 		 1131 aa  221  1.9999999999999999e-56  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.257486 
 
 
-
 
NC_009972  Haur_4308  response regulator receiver modulated diguanylate cyclase  38.41 
 
 		 552 aa  219  3.9999999999999997e-56  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0599  response regulator receiver modulated diguanylate cyclase  39.67 
 
 		 313 aa  214  9.999999999999999e-55  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.464892  normal  0.548622 
 
 
-
 
NC_009972  Haur_3468  response regulator receiver modulated diguanylate cyclase  41.45 
 
 		 412 aa  214  1.9999999999999998e-54  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0424  response regulator receiver modulated diguanylate cyclase  40.79 
 
 		 441 aa  213  4.9999999999999996e-54  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.130175  normal  1 
 
 
-
 
NC_010644  Emin_0087  response regulator receiver modulated diguanylate cyclase  36.51 
 
 		 308 aa  199  7e-50  Elusimicrobium minutum Pei191  Bacteria  normal  1  normal  0.010948 
 
 
-
 
NC_009675  Anae109_1854  histidine kinase  36.72 
 
 		 1111 aa  187  3e-46  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.131557  normal  1 
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  38.11 
 
 		 278 aa  185  1.0000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  29.62 
 
 		 322 aa  171  1e-41  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_013173  Dbac_0477  response regulator receiver modulated diguanylate cyclase  36.23 
 
 		 312 aa  168  1e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.520966  n/a   
 
 
-
 
NC_007519  Dde_1584  response regulator receiver modulated diguanylate cyclase  34.78 
 
 		 319 aa  163  3e-39  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.335279  n/a   
 
 
-
 
NC_009972  Haur_4115  response regulator receiver protein  35.19 
 
 		 311 aa  156  4e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0945  response regulator receiver modulated diguanylate cyclase  31.51 
 
 		 305 aa  153  4e-36  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_0280  response regulator receiver protein  36.24 
 
 		 295 aa  152  7e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.932912 
 
 
-
 
NC_008751  Dvul_1162  diguanylate cyclase  33.11 
 
 		 373 aa  150  3e-35  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.332491 
 
 
-
 
NC_011831  Cagg_0013  response regulator receiver modulated diguanylate cyclase  32.96 
 
 		 314 aa  150  4e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.992585 
 
 
-
 
NC_002939  GSU2062  GGDEF domain-containing protein  31.16 
 
 		 306 aa  149  8e-35  Geobacter sulfurreducens PCA  Bacteria  normal  0.0349551  n/a   
 
 
-
 
NC_009523  RoseRS_4451  response regulator receiver modulated diguanylate cyclase  30.66 
 
 		 314 aa  142  6e-33  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.586345 
 
 
-
 
NC_009767  Rcas_0804  response regulator receiver modulated diguanylate cyclase  30.29 
 
 		 314 aa  139  4.999999999999999e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.504991 
 
 
-
 
NC_010814  Glov_1313  response regulator receiver modulated diguanylate cyclase  33.91 
 
 		 312 aa  139  7.999999999999999e-32  Geobacter lovleyi SZ  Bacteria  unclonable  0.000000261036  n/a   
 
 
-
 
NC_011769  DvMF_0768  response regulator receiver modulated diguanylate cyclase  34.01 
 
 		 353 aa  136  4e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.10697 
 
 
-
 
NC_008609  Ppro_0652  response regulator receiver modulated diguanylate cyclase  34.67 
 
 		 297 aa  136  6.0000000000000005e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1869  DNA-binding response regulator  49.61 
 
 		 232 aa  134  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1956  DNA-binding response regulator  50.81 
 
 		 232 aa  133  3.9999999999999996e-30  Bacillus cereus ATCC 10987  Bacteria  normal  0.387323  n/a   
 
 
-
 
NC_005945  BAS1739  DNA-binding response regulator  51.61 
 
 		 232 aa  133  3.9999999999999996e-30  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK1689  response regulator  51.61 
 
 		 232 aa  133  3.9999999999999996e-30  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1877  DNA-binding response regulator  51.61 
 
 		 232 aa  133  3.9999999999999996e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1912  DNA-binding response regulator  51.61 
 
 		 232 aa  133  5e-30  Bacillus cereus AH820  Bacteria  n/a    normal  0.0928779 
 
 
-
 
NC_011658  BCAH187_A1985  DNA-binding response regulator  51.61 
 
 		 232 aa  132  6e-30  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_1715  response regulator  50.81 
 
 		 232 aa  132  6.999999999999999e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0124001  n/a   
 
 
-
 
NC_011772  BCG9842_B3473  DNA-binding response regulator  50 
 
 		 232 aa  131  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.00000348992 
 
 
-
 
NC_008609  Ppro_2675  diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)  37.99 
 
 		 1023 aa  130  2.0000000000000002e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0543152  n/a   
 
 
-
 
NC_010424  Daud_1846  response regulator receiver modulated diguanylate cyclase  39.65 
 
 		 314 aa  130  3e-29  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_3193  diguanylate cyclase  38.67 
 
 		 462 aa  130  3e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_0282  response regulator receiver modulated diguanylate cyclase  33.01 
 
 		 306 aa  129  5.0000000000000004e-29  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000205887  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  34.39 
 
 		 310 aa  129  1.0000000000000001e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1392  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  29.07 
 
 		 584 aa  127  4.0000000000000003e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.623748  normal  1 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  35.12 
 
 		 308 aa  126  6e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  35.12 
 
 		 308 aa  126  6e-28  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  50.41 
 
 		 235 aa  125  9e-28  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  50.39 
 
 		 236 aa  125  9e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal  1 
 
 
-
 
NC_011726  PCC8801_1936  two component transcriptional regulator, winged helix family  47.52 
 
 		 246 aa  125  9e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1963  two component transcriptional regulator, winged helix family  47.52 
 
 		 246 aa  125  9e-28  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.470012 
 
 
-
 
NC_008312  Tery_4937  two component transcriptional regulator  48.94 
 
 		 257 aa  125  1e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.565868 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  50.41 
 
 		 236 aa  124  2e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_4400  two component transcriptional regulator  50.85 
 
 		 236 aa  124  3e-27  Marinomonas sp. MWYL1  Bacteria  normal  0.998417  normal  1 
 
 
-
 
NC_009253  Dred_1554  response regulator receiver modulated diguanylate cyclase  32.73 
 
 		 419 aa  124  3e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  54.55 
 
 		 231 aa  123  3e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_011884  Cyan7425_3742  two component transcriptional regulator, winged helix family  46.1 
 
 		 263 aa  123  4e-27  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  51.67 
 
 		 239 aa  123  5e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_2192  response regulator receiver modulated diguanylate cyclase  34.2 
 
 		 303 aa  123  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  51.67 
 
 		 239 aa  122  6e-27  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  51.67 
 
 		 239 aa  122  6e-27  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  51.67 
 
 		 239 aa  122  6e-27  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  51.67 
 
 		 239 aa  122  6e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  51.67 
 
 		 239 aa  122  6e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  51.67 
 
 		 239 aa  122  6e-27  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  51.67 
 
 		 239 aa  122  6e-27  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000130788 
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  51.67 
 
 		 239 aa  122  6e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  51.67 
 
 		 239 aa  122  6e-27  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  48.76 
 
 		 231 aa  122  6e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  50.82 
 
 		 236 aa  122  7e-27  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  47.93 
 
 		 231 aa  122  9e-27  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  46.46 
 
 		 235 aa  121  9.999999999999999e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  48.76 
 
 		 235 aa  121  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4666  two component transcriptional regulator  44.63 
 
 		 233 aa  121  9.999999999999999e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  48.76 
 
 		 235 aa  121  9.999999999999999e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  33.19 
 
 		 308 aa  122  9.999999999999999e-27  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  48.76 
 
 		 235 aa  121  9.999999999999999e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  48.76 
 
 		 235 aa  121  9.999999999999999e-27  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007413  Ava_1498  two component transcriptional regulator  46.81 
 
 		 247 aa  121  9.999999999999999e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.220919  normal  1 
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  48.76 
 
 		 235 aa  121  9.999999999999999e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  48.76 
 
 		 235 aa  121  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  48.76 
 
 		 235 aa  121  9.999999999999999e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011729  PCC7424_3637  two component transcriptional regulator, winged helix family  45.39 
 
 		 246 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  48.31 
 
 		 231 aa  121  9.999999999999999e-27  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  51.26 
 
 		 237 aa  121  9.999999999999999e-27  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  52.1 
 
 		 237 aa  122  9.999999999999999e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  48.74 
 
 		 227 aa  122  9.999999999999999e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  48.76 
 
 		 235 aa  121  1.9999999999999998e-26  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  48.76 
 
 		 235 aa  121  1.9999999999999998e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  48.76 
 
 		 235 aa  121  1.9999999999999998e-26  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  50.42 
 
 		 225 aa  121  1.9999999999999998e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  48.03 
 
 		 229 aa  120  1.9999999999999998e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_007604  Synpcc7942_1860  two component LuxR family transcriptional regulator  44.06 
 
 		 235 aa  121  1.9999999999999998e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B0283  regulatory protein VanR  45.76 
 
 		 233 aa  121  1.9999999999999998e-26  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  48.06 
 
 		 235 aa  121  1.9999999999999998e-26  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  48.76 
 
 		 235 aa  121  1.9999999999999998e-26  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_010001  Cphy_3518  two component transcriptional regulator  47.54 
 
 		 234 aa  120  1.9999999999999998e-26  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_0255  two component transcriptional regulator  45.9 
 
 		 246 aa  120  3e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00000922211  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  48.31 
 
 		 232 aa  120  3e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  49.61 
 
 		 238 aa  120  3e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
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