| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3518 |
|---|
| Symbol | |
|---|
| ID | 5743629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4345282 |
|---|
| End bp | 4345986 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641294628 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001560606 |
|---|
| Protein GI | 160881638 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGG AGATAAATAT TTTAGTAGTT GATGATGATA AAGAGATCGC AGAATTGGTT
GAAATCCATT TAGTTAGTGA TGGATATCCG GTATTTAAAG CATACAATGC CATGGAAGGA
CTCGAAATTC TCCAAAAGGA GAACATTAAA CTTGTCATAC TGGATATCAT GATGCCAGGA
ATTGATGGAC TGAGTATGTG TAAAAAGATT AGAGAAACCA GTACTGTGCC AATCATTATG
TTAAGTGCGA AGTCAGCAGA CATCGATAAA ATTATAGGTC TTAGCACAGG TGCCGATGAT
TATGTGATTA AGCCATTTAA TCCGCTGGAA TTAATGGCAC GAGTTAAGTC ACAGTTAAGA
CGCTTTACAA AATTTAATCC AAGTACCTAT GAGGACAAAA ATGAAAAAGA AATTACGGTG
ACTCATTTGG TAATTAATAA AGAAACCCAT GTTGTTATGG CATATGGTAA AGAAGTGAGA
TTGACACCAA TAGAGTTTGA TATTTTATAT TTATTAGCTT CAAATGCAGG AAGAGTATTT
AGTACGGATG AAATATTTGA GCGCGTATGG AACGAAAAGA TGTACGAGGC AAATAATACG
GTCATGGTAC ATATCCGAAG ACTTAGAGAG AAAATCGAAA TGGACTCAAG GAATGCAGAA
ATCATTAAAA CTGTATGGGG TGTTGGATAC AAGATTGAGA AGTAA
|
|---|
| Protein sequence | MAEEINILVV DDDKEIAELV EIHLVSDGYP VFKAYNAMEG LEILQKENIK LVILDIMMPG
IDGLSMCKKI RETSTVPIIM LSAKSADIDK IIGLSTGADD YVIKPFNPLE LMARVKSQLR
RFTKFNPSTY EDKNEKEITV THLVINKETH VVMAYGKEVR LTPIEFDILY LLASNAGRVF
STDEIFERVW NEKMYEANNT VMVHIRRLRE KIEMDSRNAE IIKTVWGVGY KIEK
|
|---|
| |