Gene Haur_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4115 
Symbol 
ID5735976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5261876 
End bp5262811 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content51% 
IMG OID641281269 
Productresponse regulator receiver protein 
Protein accessionYP_001546875 
Protein GI159900628 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAAAG AACGCATCTT AGTCGTCGAA GACCAAGCCG ATATCTCTGG CTTGCTCAAA 
ATTTACTTCA CCTCGCAAGG TTATGAAGTG ATGACCGCGA TGCGCGGGCA GGTAGCGCTC
GATCTTGTGA AACGCACGCC GCCGCATTTG GCCTTGCTTG ATGTGAATTT GCCCGATATG
ACCGGGTATG ATATTGGAAA AGCACTGCGT GCCAATGCCC GTACAAAGCA TATTCCAATC
ATTTTCTTGA CCGCCCGTGG TGAAAAAAGC GATAAAGGCA TTGGCCTCGG TGAAGTCCAA
GCCAATGACT ATATCGTCAA GCCCTTCGAT ATTGAAGAAG TCCATATGCG GGTGCGCAAT
AACTTGGCCT TGGCTCGCGA AAAGAGCCGC ACCCACCCGG TGACTGGCCT GCCAACCGCC
GAATTGATTA ACGAAGAACT CCGCCGTTTG CTCTCAGCCG AAGTTTGGAC GCTGGCAACC
GTGCATATCA ATGGCTTCGA TACCTTTACC CAAGTCTATG GCTCGGTCGT CGGCGAGGAT
GTGCTGAAGT TTGGCGCATT GTTGATCAAC GAAGTCGTCA GCGAGTTGGG TGGCCAAGAG
GAGTTCATCG GTCAATTGGT CACAGGGCCA GATTTCTTGA TTACGTCGAT GCCTGAACGC
GCTAAAGCAA TTGTCGATCG TATCGCTGAA CGCTTTGATC AAGAAATTGG CTTGCACTAT
AGCTATCCCG ACCGTAAACG TGGCTATATT TTGGCTAAAA ATGCCGATGG TACTGAACGC
CAAGAACCAC TGATGACGGT TTCAATCGGG GTGCTCGATA GCAACGATGG GCCATTCTAC
GATATCCGTG AACTCAGCGA AACGGCTGAA AGTGTGCGCC CATTGCCCAA CCTGCAAGAT
GGTTCAGTTC GTAGCGCTGT GAAATTTGGC CGCTAA
 
Protein sequence
MSKERILVVE DQADISGLLK IYFTSQGYEV MTAMRGQVAL DLVKRTPPHL ALLDVNLPDM 
TGYDIGKALR ANARTKHIPI IFLTARGEKS DKGIGLGEVQ ANDYIVKPFD IEEVHMRVRN
NLALAREKSR THPVTGLPTA ELINEELRRL LSAEVWTLAT VHINGFDTFT QVYGSVVGED
VLKFGALLIN EVVSELGGQE EFIGQLVTGP DFLITSMPER AKAIVDRIAE RFDQEIGLHY
SYPDRKRGYI LAKNADGTER QEPLMTVSIG VLDSNDGPFY DIRELSETAE SVRPLPNLQD
GSVRSAVKFG R