More than 300 homologs were found in PanDaTox collection
for query gene Haur_3468 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009972  Haur_3468  response regulator receiver modulated diguanylate cyclase  100 
 
 
412 aa  831    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3221  response regulator receiver modulated diguanylate cyclase  50.71 
 
 
443 aa  348  1e-94  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0497788 
 
 
-
 
NC_009523  RoseRS_3924  response regulator receiver modulated diguanylate cyclase  49.86 
 
 
443 aa  345  7e-94  Roseiflexus sp. RS-1  Bacteria  normal  0.350169  normal 
 
 
-
 
NC_011831  Cagg_0424  response regulator receiver modulated diguanylate cyclase  46.2 
 
 
441 aa  289  6e-77  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.130175  normal 
 
 
-
 
NC_011831  Cagg_0599  response regulator receiver modulated diguanylate cyclase  46.51 
 
 
313 aa  266  4e-70  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.464892  normal  0.548622 
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  41.37 
 
 
310 aa  237  3e-61  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_008578  Acel_1275  response regulator receiver modulated diguanylate cyclase  41.78 
 
 
304 aa  234  2.0000000000000002e-60  Acidothermus cellulolyticus 11B  Bacteria  hitchhiker  0.00827298  normal  0.435617 
 
 
-
 
NC_010320  Teth514_2061  response regulator receiver modulated diguanylate cyclase  40.26 
 
 
318 aa  227  2e-58  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000000365539  n/a   
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  41.45 
 
 
326 aa  214  1.9999999999999998e-54  Salinispora tropica CNB-440  Bacteria  normal  normal  0.402703 
 
 
-
 
NC_009972  Haur_4308  response regulator receiver modulated diguanylate cyclase  39.2 
 
 
552 aa  213  5.999999999999999e-54  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0087  response regulator receiver modulated diguanylate cyclase  39.02 
 
 
308 aa  211  1e-53  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.010948 
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  40.79 
 
 
326 aa  211  3e-53  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  36.07 
 
 
1131 aa  207  2e-52  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.257486 
 
 
-
 
NC_013947  Snas_2593  response regulator receiver modulated diguanylate cyclase  38.03 
 
 
340 aa  191  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.483  normal  0.196753 
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  34.16 
 
 
322 aa  189  5.999999999999999e-47  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_009675  Anae109_1854  histidine kinase  35.64 
 
 
1111 aa  186  7e-46  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.131557  normal 
 
 
-
 
NC_013440  Hoch_0280  response regulator receiver protein  33.33 
 
 
295 aa  173  5e-42  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.932912 
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  38.46 
 
 
278 aa  166  5e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_1162  diguanylate cyclase  32.03 
 
 
373 aa  159  1e-37  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.332491 
 
 
-
 
NC_007519  Dde_1584  response regulator receiver modulated diguanylate cyclase  31.8 
 
 
319 aa  158  2e-37  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.335279  n/a   
 
 
-
 
NC_013173  Dbac_0477  response regulator receiver modulated diguanylate cyclase  30.8 
 
 
312 aa  151  3e-35  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.520966  n/a   
 
 
-
 
NC_013440  Hoch_5056  response regulator receiver protein  30.42 
 
 
305 aa  147  3e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.749886 
 
 
-
 
NC_011831  Cagg_0013  response regulator receiver modulated diguanylate cyclase  32.38 
 
 
314 aa  146  6e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.992585 
 
 
-
 
NC_009972  Haur_4115  response regulator receiver protein  32.89 
 
 
311 aa  145  2e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0768  response regulator receiver modulated diguanylate cyclase  31.19 
 
 
353 aa  142  9.999999999999999e-33  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.10697 
 
 
-
 
NC_009483  Gura_0282  response regulator receiver modulated diguanylate cyclase  31.68 
 
 
306 aa  139  7.999999999999999e-32  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000205887  n/a   
 
 
-
 
NC_007517  Gmet_0945  response regulator receiver modulated diguanylate cyclase  31.27 
 
 
305 aa  139  1e-31  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0176  diguanylate cyclase/phosphodiesterase  37.68 
 
 
786 aa  137  2e-31  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.000781405  normal 
 
 
-
 
NC_009943  Dole_3193  diguanylate cyclase  38.19 
 
 
462 aa  136  5e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4451  response regulator receiver modulated diguanylate cyclase  31.63 
 
 
314 aa  136  6.0000000000000005e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.586345 
 
 
-
 
NC_010814  Glov_1313  response regulator receiver modulated diguanylate cyclase  33.1 
 
 
312 aa  136  7.000000000000001e-31  Geobacter lovleyi SZ  Bacteria  unclonable  0.000000261036  n/a   
 
 
-
 
NC_013173  Dbac_2663  diguanylate cyclase/phosphodiesterase  36.45 
 
 
753 aa  134  1.9999999999999998e-30  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1989  diguanylate cyclase  38.2 
 
 
442 aa  133  6.999999999999999e-30  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.0000357818  normal 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  29.9 
 
 
314 aa  131  3e-29  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2062  GGDEF domain-containing protein  29.28 
 
 
306 aa  130  5.0000000000000004e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.0349551  n/a   
 
 
-
 
NC_009767  Rcas_0804  response regulator receiver modulated diguanylate cyclase  30.61 
 
 
314 aa  130  6e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.504991 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  32.47 
 
 
308 aa  129  8.000000000000001e-29  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  34.32 
 
 
322 aa  129  8.000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_002939  GSU1937  GGDEF domain/HAMP domain-containing protein  36.81 
 
 
436 aa  129  1.0000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  31.45 
 
 
322 aa  128  2.0000000000000002e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  31.37 
 
 
338 aa  127  3e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2675  diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)  38.92 
 
 
1023 aa  127  3e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0543152  n/a   
 
 
-
 
NC_013216  Dtox_1949  diguanylate cyclase/phosphodiesterase  33.33 
 
 
773 aa  127  4.0000000000000003e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0617  diguanylate cyclase/phosphodiesterase  35.75 
 
 
883 aa  126  6e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.00427205 
 
 
-
 
NC_007519  Dde_1628  diguanylate cyclase/phosphodiesterase  36.08 
 
 
766 aa  126  7e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2819  diguanylate cyclase  36.26 
 
 
438 aa  126  7e-28  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.00000000520374  n/a   
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.14 
 
 
593 aa  125  9e-28  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.14 
 
 
593 aa  125  9e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  30.94 
 
 
322 aa  125  1e-27  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  31.33 
 
 
319 aa  125  1e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  35.24 
 
 
308 aa  124  2e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  35.24 
 
 
308 aa  124  2e-27  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  35.59 
 
 
310 aa  124  4e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_29300  Response regulator  33.6 
 
 
310 aa  124  4e-27  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2411  diguanylate cyclase/phosphodiesterase  33.86 
 
 
632 aa  123  5e-27  Psychromonas ingrahamii 37  Bacteria  normal  hitchhiker  0.00893826 
 
 
-
 
NC_009654  Mmwyl1_1645  response regulator receiver modulated diguanylate cyclase  32.3 
 
 
308 aa  123  7e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.456967 
 
 
-
 
NC_011729  PCC7424_2022  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  29.6 
 
 
589 aa  122  8e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_1210  diguanylate cyclase/phosphodiesterase  35.23 
 
 
797 aa  122  9e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.489928 
 
 
-
 
NC_007760  Adeh_3473  response regulator receiver modulated diguanylate cyclase  30.58 
 
 
351 aa  122  9e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  33.08 
 
 
349 aa  122  9.999999999999999e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0652  response regulator receiver modulated diguanylate cyclase  31.99 
 
 
297 aa  122  9.999999999999999e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2369  diguanylate cyclase  37.22 
 
 
353 aa  121  1.9999999999999998e-26  Magnetococcus sp. MC-1  Bacteria  normal  0.34805  normal  0.423605 
 
 
-
 
NC_010506  Swoo_0828  response regulator receiver modulated diguanylate cyclase  32.34 
 
 
324 aa  120  3e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3527  diguanylate cyclase/phosphodiesterase  31.71 
 
 
581 aa  121  3e-26  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0350  diguanylate cyclase/phosphodiesterase  39.33 
 
 
606 aa  120  3.9999999999999996e-26  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0495897  normal  0.0419453 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  31.91 
 
 
317 aa  120  6e-26  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1846  response regulator receiver modulated diguanylate cyclase  31.99 
 
 
314 aa  119  7e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  45.53 
 
 
228 aa  119  9.999999999999999e-26  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  32.59 
 
 
308 aa  118  1.9999999999999998e-25  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  43.71 
 
 
229 aa  118  1.9999999999999998e-25  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  32 
 
 
312 aa  117  3e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2463  response regulator receiver modulated diguanylate cyclase  30.77 
 
 
301 aa  117  3e-25  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0201  diguanylate cyclase  33.52 
 
 
446 aa  117  3e-25  Geobacter bemidjiensis Bem  Bacteria  normal  0.17932  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  27.59 
 
 
337 aa  117  3.9999999999999997e-25  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_002939  GSU2313  response regulator  32 
 
 
301 aa  117  5e-25  Geobacter sulfurreducens PCA  Bacteria  normal  0.483613  n/a   
 
 
-
 
NC_009253  Dred_1554  response regulator receiver modulated diguanylate cyclase  29.6 
 
 
419 aa  116  6e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4177  diguanylate cyclase  31.53 
 
 
347 aa  116  6e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  30.43 
 
 
305 aa  116  8.999999999999998e-25  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  29.11 
 
 
322 aa  116  8.999999999999998e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  41.51 
 
 
240 aa  115  1.0000000000000001e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1498  two component transcriptional regulator  48.3 
 
 
247 aa  115  1.0000000000000001e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  0.220919  normal 
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  32.47 
 
 
317 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  32.47 
 
 
317 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  39.39 
 
 
227 aa  114  3e-24  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_011884  Cyan7425_3742  two component transcriptional regulator, winged helix family  46.46 
 
 
263 aa  114  3e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  46.67 
 
 
223 aa  114  3e-24  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_010002  Daci_1507  response regulator receiver modulated diguanylate cyclase  32.22 
 
 
308 aa  114  3e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.914031 
 
 
-
 
NC_010730  SYO3AOP1_0730  diguanylate cyclase  34.42 
 
 
343 aa  114  3e-24  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0705  diguanylate cyclase/phosphodiesterase  34.21 
 
 
590 aa  114  3e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3153  putative diguanylate phosphodiesterase  36.96 
 
 
584 aa  114  3e-24  Shewanella amazonensis SB2B  Bacteria  normal  0.920716  normal 
 
 
-
 
NC_013161  Cyan8802_1963  two component transcriptional regulator, winged helix family  47.62 
 
 
246 aa  114  4.0000000000000004e-24  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.470012 
 
 
-
 
NC_007484  Noc_1271  hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase  32.66 
 
 
1499 aa  114  4.0000000000000004e-24  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.422796  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  42.46 
 
 
230 aa  114  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  41.67 
 
 
227 aa  114  4.0000000000000004e-24  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_011726  PCC8801_1936  two component transcriptional regulator, winged helix family  47.62 
 
 
246 aa  114  4.0000000000000004e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40.12 
 
 
231 aa  113  5e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_008312  Tery_4937  two component transcriptional regulator  47.24 
 
 
257 aa  114  5e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.565868 
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  42.52 
 
 
227 aa  113  5e-24  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  44.68 
 
 
229 aa  113  7.000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  33.16 
 
 
230 aa  113  7.000000000000001e-24  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
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