More than 300 homologs were found in PanDaTox collection
for query gene Mboo_1478 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009712  Mboo_1478  response regulator receiver protein  100 
 
 		 426 aa  874    Candidatus Methanoregula boonei 6A8  Archaea  normal  0.274981  normal  1 
 
 
-
 
NC_009712  Mboo_0965  response regulator receiver protein  35.53 
 
 		 411 aa  221  1.9999999999999999e-56  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.656429  normal  0.215977 
 
 
-
 
NC_009712  Mboo_1937  response regulator receiver protein  49.26 
 
 		 209 aa  191  2.9999999999999997e-47  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.224265  normal  1 
 
 
-
 
NC_007796  Mhun_1618  response regulator receiver domain-containing protein  45.63 
 
 		 208 aa  174  1.9999999999999998e-42  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_2156  response regulator receiver protein  45.89 
 
 		 212 aa  172  9e-42  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
-
 
NC_009712  Mboo_2365  response regulator receiver protein  44.02 
 
 		 221 aa  170  3e-41  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.878823  normal  1 
 
 
-
 
NC_009051  Memar_0295  response regulator receiver protein  46.46 
 
 		 211 aa  168  2e-40  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_009051  Memar_0309  response regulator receiver protein  46.46 
 
 		 211 aa  168  2e-40  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_009712  Mboo_1936  response regulator receiver protein  39.39 
 
 		 221 aa  142  9.999999999999999e-33  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.941096  normal  1 
 
 
-
 
NC_007796  Mhun_1472  response regulator receiver domain-containing protein  42.26 
 
 		 216 aa  125  2e-27  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_2157  response regulator receiver protein  38.52 
 
 		 140 aa  107  3e-22  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
-
 
NC_007796  Mhun_1613  response regulator receiver domain-containing protein  34.3 
 
 		 211 aa  103  7e-21  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  38.39 
 
 		 1127 aa  87.4  4e-16  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_2638  response regulator receiver domain-containing protein  37.1 
 
 		 220 aa  87  6e-16  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_013162  Coch_1010  histidine kinase  30.52 
 
 		 1347 aa  86.3  0.000000000000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.0363668  n/a   
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  37.41 
 
 		 488 aa  85.9  0.000000000000001  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.182398 
 
 
-
 
NC_009523  RoseRS_0161  response regulator receiver protein  42.86 
 
 		 132 aa  84.3  0.000000000000004  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_1901  response regulator receiver protein  34.43 
 
 		 125 aa  83.6  0.000000000000007  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  42.59 
 
 		 377 aa  83.6  0.000000000000007  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_009972  Haur_0719  multi-sensor signal transduction histidine kinase  38.79 
 
 		 531 aa  82.8  0.00000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  35.14 
 
 		 407 aa  82  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  38.66 
 
 		 230 aa  81.6  0.00000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  38.66 
 
 		 230 aa  82  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  38.66 
 
 		 230 aa  81.6  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  36.36 
 
 		 383 aa  81.6  0.00000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  37.33 
 
 		 367 aa  81.6  0.00000000000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  39.84 
 
 		 333 aa  82  0.00000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal  1 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  39.2 
 
 		 451 aa  82  0.00000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  35.04 
 
 		 231 aa  81.3  0.00000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.777838 
 
 
-
 
NC_007796  Mhun_0159  response regulator receiver domain-containing protein  42.24 
 
 		 128 aa  81.3  0.00000000000003  Methanospirillum hungatei JF-1  Archaea  normal  0.0749254  normal  1 
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  31.11 
 
 		 381 aa  80.5  0.00000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_4011  two component transcriptional regulator, winged helix family  37.19 
 
 		 236 aa  80.5  0.00000000000006  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0268606  normal  1 
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  33.64 
 
 		 336 aa  80.1  0.00000000000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009712  Mboo_1464  multi-sensor signal transduction histidine kinase  37.68 
 
 		 579 aa  80.1  0.00000000000007  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.164507  normal  1 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  31.07 
 
 		 443 aa  80.1  0.00000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.394463 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  35.56 
 
 		 356 aa  80.1  0.00000000000007  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_1278  sensory box protein/response regulator  42.31 
 
 		 705 aa  79.3  0.0000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.517683  n/a   
 
 
-
 
NC_007005  Psyr_1098  PAS:GGDEF  41.35 
 
 		 705 aa  79  0.0000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  32.35 
 
 		 224 aa  79.3  0.0000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  42.34 
 
 		 348 aa  79  0.0000000000001  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  38.13 
 
 		 236 aa  78.6  0.0000000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  32.98 
 
 		 363 aa  78.6  0.0000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  34.03 
 
 		 349 aa  78.6  0.0000000000002  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  35.66 
 
 		 566 aa  79  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal  1 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  42.34 
 
 		 348 aa  79  0.0000000000002  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_0674  response regulator receiver protein  38.98 
 
 		 120 aa  79  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0682036 
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  34.38 
 
 		 326 aa  78.6  0.0000000000002  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  34.13 
 
 		 221 aa  77.8  0.0000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.416641 
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  32.86 
 
 		 441 aa  78.2  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  35.17 
 
 		 225 aa  77.8  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  34.81 
 
 		 235 aa  78.2  0.0000000000003  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  35.82 
 
 		 292 aa  77.8  0.0000000000004  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  30.3 
 
 		 441 aa  77.4  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_013739  Cwoe_4508  two component transcriptional regulator, winged helix family  35.77 
 
 		 231 aa  77.4  0.0000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  37.5 
 
 		 228 aa  77.4  0.0000000000004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A1052  sensory transduction histidine kinase  29.14 
 
 		 1046 aa  77.8  0.0000000000004  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  34.18 
 
 		 348 aa  77.4  0.0000000000004  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_007796  Mhun_0886  response regulator receiver domain-containing protein  36.75 
 
 		 137 aa  77.4  0.0000000000004  Methanospirillum hungatei JF-1  Archaea  normal  0.384988  normal  0.153587 
 
 
-
 
NC_009767  Rcas_3077  response regulator receiver protein  37.5 
 
 		 124 aa  77.4  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.74045  normal  1 
 
 
-
 
NC_008340  Mlg_0669  response regulator receiver protein  35.77 
 
 		 123 aa  77  0.0000000000005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  36.15 
 
 		 301 aa  77.4  0.0000000000005  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  38.57 
 
 		 353 aa  77  0.0000000000006  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_011884  Cyan7425_1392  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  36.09 
 
 		 584 aa  77  0.0000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  0.623748  normal  1 
 
 
-
 
NC_013739  Cwoe_3240  two component transcriptional regulator, winged helix family  36.36 
 
 		 229 aa  76.6  0.0000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.713085  normal  0.151148 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  43.4 
 
 		 365 aa  76.6  0.0000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0748941 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  38.66 
 
 		 227 aa  76.6  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal  1 
 
 
-
 
NC_007413  Ava_2324  two component LuxR family transcriptional regulator  32.84 
 
 		 245 aa  76.6  0.0000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.42123  normal  1 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  38.6 
 
 		 437 aa  76.6  0.0000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  35.71 
 
 		 455 aa  76.6  0.0000000000008  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  34.38 
 
 		 326 aa  76.6  0.0000000000008  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.402703 
 
 
-
 
NC_008255  CHU_3042  two-component response regulator  32.61 
 
 		 228 aa  76.6  0.0000000000008  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.330896  normal  1 
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  34.9 
 
 		 278 aa  76.6  0.0000000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  34.59 
 
 		 232 aa  76.3  0.0000000000009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  39.5 
 
 		 452 aa  76.6  0.0000000000009  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  43.4 
 
 		 350 aa  76.3  0.0000000000009  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  32 
 
 		 337 aa  76.3  0.0000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_010086  Bmul_4359  two component transcriptional regulator  35.59 
 
 		 229 aa  76.3  0.000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  36.29 
 
 		 235 aa  76.3  0.000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  40.54 
 
 		 395 aa  76.3  0.000000000001  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5611  two component transcriptional regulator, winged helix family  35.59 
 
 		 235 aa  76.3  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.736991 
 
 
-
 
NC_007498  Pcar_0653  two-component response regulator PhoB  35.71 
 
 		 230 aa  76.3  0.000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.131558  n/a   
 
 
-
 
NC_011662  Tmz1t_2649  response regulator receiver protein  33.9 
 
 		 122 aa  75.9  0.000000000001  Thauera sp. MZ1T  Bacteria  normal  0.857048  n/a   
 
 
-
 
NC_007796  Mhun_1572  response regulator receiver domain-containing protein  34.31 
 
 		 214 aa  75.5  0.000000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.734194  normal  1 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  39.68 
 
 		 311 aa  75.9  0.000000000001  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  34.45 
 
 		 236 aa  75.9  0.000000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_2445  response regulator receiver  37.7 
 
 		 125 aa  75.9  0.000000000001  Methanococcoides burtonii DSM 6242  Archaea  normal  0.942791  n/a   
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  34.04 
 
 		 227 aa  75.9  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  36.22 
 
 		 231 aa  75.9  0.000000000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_008340  Mlg_0355  response regulator receiver protein  39.29 
 
 		 161 aa  76.3  0.000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.384709  normal  0.97064 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  43.4 
 
 		 314 aa  76.3  0.000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_1604  two component transcriptional regulator, AraC family  34.15 
 
 		 904 aa  75.9  0.000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  39.17 
 
 		 225 aa  75.5  0.000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD0221  response regulator PleD  34.68 
 
 		 460 aa  75.5  0.000000000002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3746  response regulator receiver protein  37.14 
 
 		 714 aa  75.1  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.374039  n/a   
 
 
-
 
NC_011891  A2cp1_3829  response regulator receiver protein  37.14 
 
 		 713 aa  75.1  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0106552  n/a   
 
 
-
 
NC_007413  Ava_1086  multi-sensor hybrid histidine kinase  30.15 
 
 		 1431 aa  75.1  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007604  Synpcc7942_1860  two component LuxR family transcriptional regulator  31.34 
 
 		 235 aa  75.5  0.000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_3688  response regulator receiver domain-containing protein  37.14 
 
 		 718 aa  75.1  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2699  response regulator receiver modulated metal dependent phosphohydrolase  33.87 
 
 		 328 aa  75.1  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2076  histidine kinase  28.93 
 
 		 1373 aa  75.5  0.000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
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