Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4011 |
Symbol | |
ID | 8227607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4862576 |
End bp | 4863286 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644931853 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003088380 |
Protein GI | 255037759 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0268606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG CTAAATCTGC AAACTCGGCT CCGAAAGTAC TGGTAGTTGA CGACGATTCC GACATTGTTG AACTTCTCGA ATATAACTTA ACCAAGGAAG GCTATTCGGT ACTGACCGCC TCCAACGGAA AGAAGGCTAT CGACATCGCC AAGGCATTCG TACCCGATCT CATCCTCCTC GACATCATGA TGCCCCAACT CGACGGCATC GAAACCGGCA GGATATTGCG CCAGAATCCC GACATCAAGA ACACCTATAT CCTGTTTCTG ACCGCGCGCT CCGAGGAATA TTCGGAAGTA GCTGCGTTTG AAGTAGGTGC CGACGATTAC ATCACCAAGC CGATCAAGCC GCGTGCGCTC ATGAGCCGGA TCAATGCATT GTTCCGTCGC GAAGCCCAGA AAGCGGAGTC GGGCGATACG ATCGAGATCC TCGATTTGTC CATTAACCGC AAGAACTATA CGGTAACCCA GGGCGGCGAG AAGTCGACTG TTTTGCCTAA AAAAGAATTC GAACTGCTGT TTTTCCTGGC ACAAACGCCG AACAAGGTTT TCAGCCGCGA CGAATTGCTG CAAAAGATCT GGGGGGCAGA TATTTATGTG CTCGAAAGGA CCGTGGATGT CCATATTCGC AAACTGCGCG AAAAGCTGGG CGATACTTAT ATCAAAACTT TGAAGGGCGT AGGCTATATG TTCAGCAACG AGCGCGAATA A
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Protein sequence | MSTAKSANSA PKVLVVDDDS DIVELLEYNL TKEGYSVLTA SNGKKAIDIA KAFVPDLILL DIMMPQLDGI ETGRILRQNP DIKNTYILFL TARSEEYSEV AAFEVGADDY ITKPIKPRAL MSRINALFRR EAQKAESGDT IEILDLSINR KNYTVTQGGE KSTVLPKKEF ELLFFLAQTP NKVFSRDELL QKIWGADIYV LERTVDVHIR KLREKLGDTY IKTLKGVGYM FSNERE
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