| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2324 |
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| Symbol | |
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| ID | 3683594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2885773 |
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| End bp | 2886510 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637717669 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_322837 |
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| Protein GI | 75908541 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.42123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCTTG TAGAGATAAT CTCAGTAAAA AATAATGCTA GGGGTGTATT GTCCATGCCC
TTGACGATCC TTGTAGTGGA TGACGATCTG GGCACTCGTC TGTCTATTAG TGATTACCTA
GAACTGTCTG GCTATTCAGT GATTACGGCT AATGATGGTC AGGAAGCTTT GACTATGGTG
GAAGTATACC ATCCTGATTT AATCGTGACT GATATTGTGA TGCCAAGAAT GAATGGTTAT
GAGTTGGTGC GTCGAGTTCG TCAGCAACCT CCATTCCGTT TATTACCTGT AATTTTATTA
ACAGCGCGTA CGAGAACCCA GGAAAGAATT CTTGGTTATC AGTCGGGATG TGATTTATAC
TTACCTAAAC CTTTTGAACT AGAAGAGTTA GCAGCAGCGA TTCATAATCT GTTAGAGCGA
TCGCAAATCA TTCAATCTGA ATATAGATTT TCTCAAAAAG ATAATTCAGG CAGCCCCCTC
CCTAGCAAAA TTGTAGAGAG TCATCACTCT GTATTCACTC ATGTGGAAAA ATCGCACCTA
CTCTCATCTT TAACGCCGAG AGAGCAAGAA GTCTTGGAAA TGTTGACTCA TGGTTTGTCT
AATATCGAAA TAGGGCATCA ATTACACTTG AGTCCCAGAA CCGTGGAAAA ATACGTTAGT
AGTCTACTGC GAAAAACTAC CACCAGCAAC CGGGCCGAAC TCGTGCGTTT TGCCATTACA
CATGGTTTAG TAGAGTAA
|
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| Protein sequence | MELVEIISVK NNARGVLSMP LTILVVDDDL GTRLSISDYL ELSGYSVITA NDGQEALTMV
EVYHPDLIVT DIVMPRMNGY ELVRRVRQQP PFRLLPVILL TARTRTQERI LGYQSGCDLY
LPKPFELEEL AAAIHNLLER SQIIQSEYRF SQKDNSGSPL PSKIVESHHS VFTHVEKSHL
LSSLTPREQE VLEMLTHGLS NIEIGHQLHL SPRTVEKYVS SLLRKTTTSN RAELVRFAIT
HGLVE
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