| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1010 |
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| Symbol | |
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| ID | 8367430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1181076 |
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| End bp | 1185119 |
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| Gene Length | 4044 bp |
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| Protein Length | 1347 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983436 |
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| Product | histidine kinase |
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| Protein accession | YP_003141126 |
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| Protein GI | 256819847 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0363668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC TACTCTACAT AATATGGGTG TTATTTCCTG CGTTGCTCTC AGCGCAGGAC
TGGGCGTATC TATCCAAAAT CACCACCCAC AACGGATTGG TAAGCAATGA GGTAACCAGT
ATGTTGCAGG ACTCAAAAGG CTTTATATGG ATAGGCACTG ATGACGGTTT GCACAAGTTC
GACGGTTATG ATATCACTGT GTATAAGCAC AATAGCACCC AGAAAAACAG CCTTGCAGGA
AACTCTATCA GGTGTTTGTT TGAAGACAGT CAGCACAACC TTTGGATTGG CTTAAAAGGC
GAAGGACTCA GCAAACTGAA CCTGCGCACG GGTGTCTTCA CCACCTACAA ACATCAAAAA
GGCAGTAAAA GCCTTAGCTA TAACGATGTA GCGGGCATAG TAGAGGACGA GGCGGGTATG
ATTTGGATAG CCGTAGACCG CGGTGGACTG GATATGCTCA ACCCCAAAAC AGGAGTTTTC
ACTCATTACG ACATTCGAGA AAAAGGCACT TCCAAACCTC TGAATAACGC CCTTACGGGT
ATGGTAGCTA CCAATGGCAC GCTCATACTC AGTTCGTGGG GTGGCGGGGT GTATAGCTTT
AACCGCAAGG AAAAACAGTT TGAACTACAC CCTTATTGGC ATACAAACGA CACTGATGAG
AAGGTATGCA AGCACATTTT CAACCTCTAC AAAGACCCAG AAGGCACTGT TTGGGTATCC
TCAGCTCACG GTGGTTTGTA TAGCTTAAAT GAAAAAACAA AAAACTACCA ACGTTATGCG
GTGTGTGGTG CGAGCCATTG CACGCATAAT GTAAATGTGC TTTCGGTTGC CGATGACGGT
CAGCACAACA TTTGGATAGA GACCAACGAG GGCATCAAAC TCCTCAACAA AAACACTCAC
ACCATTACCG ACTTGCAAAA CCCGCAACTC GCTAATGAAA GTGTGAATCA CATCTACCGA
GATAAAAGCC AACTGATGTG GGTGAGTACC GCCTCAGGGA TTTATTATTT TAGCCCTACC
CCTGCCCAAT TCAAATGGGT GAGATACAAG AATTTTCTTT CGGAAAAACA AGTGCGCGCT
ATCTTTAAGG ACAGCAAAGG CAACCTCTGG ATAGGAGGCT TAAACCATAT TGATAAACTC
AATCCTGACA GAAAGACACT CACTGCTTTT AGCAACCAAT CCTACAACCC CAATACTCAA
CTCTATCAGG CTTTCTGTGA AGATGCCGAA GGCAATATTT GGATAGGTAA CTACGCCAAT
TACCTCATTA AGTACAACCC TTCGTCCAAT AGTTTTAGTC AAGTGCCCAT TCCCGTGCCT
ACCGGTACGA ATTACACCTA CCGCAACATC TATCAAATTA CCAAAGATTG GGATAATTCC
TTTTGGCTTG CTACCGAATT GGGGGCAATC AACTACCAGC CCGCTACGGG GGTTTTTACC
CCGCTATTCG AAAGTAAAAA CATTATCTAC CCCGAAGATA AAACCCACGT AATTCACCGA
GACCAAGACC TCCTTTTGTG GGTAGGCACC GAAAAAGGCT TGCGTTGTTA CACCCGCGAC
CTAAAACTCA AACACACCTA TACAGCCCTA AAAAACAACA CACACGCCCT GAGCAACGAC
TTTATTACGG CTATCCACGA GAGCAAGGAC GGCACTTTGT GGATAGGCAC CAAAGGAGGG
CTACACAAGT TCGACAAGAA AACCGAACGC TTTGAACTCA TTCGCCGTAA AGGCACCGAC
TATGGTGACC CTATTTTCGG TTTGGCAGAA GACAACAGTG GCAATCTGTG GATGAGTACC
CCTTCGGCAG TACTGAAATA CAGCCCAAAA AGCCAACAGT TCCAAGTGTT CAACGAGTAC
GACGGATTGC AAAATTCGGG CTTTCAATTA GGAGCTTTTG CACAAGCCAA AGACGGCGAG
CTACTCATTG GAGGAAAAGA CGGTTTTAAT ACTTTCTATC CTCAACAGCT TACCCTTAAC
CAAACCCAAC CCAAAGTAGT AATTTCCGAT TTTCAAATAT TCAACAAATC GGTACGACCA
GAAGAAGGAG GGGTGCTCAC CGAGGTGATA GATGAGACCC AAAGCATTCA TCTCAAACAT
TGGCAATCGG TGATATCGTT CCGTTTTTCG GCATTGAACT ACCGCGCTTC TTTCAAAAAC
CAATACGCCT ATATGCTCGA AGGTTTCGAC AGCGATTGGA TTTACGATGC TTCCGAGCGC
ATCGCTACCT ATACAAACCT TAACCCAGGT ACTTACATTT TCAAAGTAAA AGCCACTAAC
AACGACGGGG TGTGGAGCGA AAAACCTACT ACGATTAAGA TAATAGTAGC CCCTCCGCTT
TGGCGAACAA CTTGGGCTTA TATCCTCTAT GCCTTGCTAG GGGTGGGCTT GCTCGTGCTT
ATCGTCAAGT ATTACACCAT CAAGGAAAGA GACAAGCAGA ACCTGCGCAT CTCCCAATTG
GAAGCCCAGC GTATGTACGA AATCAACGAG ATGAAAACCA ACTTTTTCTC TAATATCTCT
CACGAGTTCA AAACACCGCT TTCGCTGATT GTAGGTCCGC TGAACCAAAT GGTAGATGAT
GAGAACTCTC CTAAGGAATA CAAAGATAAG TATACAATGA TGTTGCGCAA CGCCCAAAAA
CTGATGCGCC TTATCAACCA ATTACTCGAT TTTAGAAAGT TAGAAAAAAA CAAATTAGAG
CTGAATTTAC AATACGACGA TGTGGTGAAA TTTGTGAAAG GAGTGAGTGA AACCTTTGCT
TATCTGGCTT TGGAAAAACA AATACAATAC ACTATCAAGA GTACAATGCC CAGCTTATGG
ATGCCTTTTG ATGCCGATAA GTTAGACAAA ATTCTCTACA ATCTCATCGG GAATGCCTTC
CAATACACCC CCGAAAAAGG CGCAATCACG GTGCTCATTG CCACTGTGGT GCAAAATCAG
CAGAAGTTTT TGCAAATAAA GATAGCCGAC ACAGGCATTG GCATCTCCAA AGAAGAACAA
AAACAGCTCT TTACCGCTTT CTTGCAAGGC AAACGCCAAA AAGAACTCCA CAACGAGGGG
GCAGGCTTAG GGCTCGCCTT CACCAAAGAC CTCGTCGACC TACACCAAGG GCATATAGAG
GTAGAAAGTG AAGAAAAACA AGGGGCTACC TTCACGGTAT TGTTGCCTAT TTTAGATGTG
CCACAACTCC ACGACGAGGC TTCTATCACC TTGCAACAGA TAGACACTAC CCAAACGGTA
AAAGAAATAG CTCCACAAGA AAATGCAACC GACAAGGAAG AGACTATTTT GGTAGTGGAA
GACAACGACG ATATGCGCGA TTATATACAG CACATTCTCA ACGAGCATTT CCACGTACTA
TTAGCACGCG ACGGTGAAGA GGGCTTAGAA TTGGCAATTG CCCACATCCC CGACCTTATT
GTATCGGATA TTATGATGCC TAAACGCGAT GGCATTTCAA TGGTAAAAGA ACTGCGCGCC
AACGAAAAAA CAAACCATAT TCCTATCATT TTGCTCACTG CCTTAGACAA GGAATCGCAA
GTGGTAGAGG GGTATAGTTT GGGAGTAGAA GACTATATCA CCAAACCTTT TTCGGCTAAA
ATCCTCAGCA AGCGCATCGA AAATATACTG CTTTCGCGCA AGAAGCTGTG GGAACAGTAC
AGCTCCTCAT CCGACCTGAA TGTGTATCGC GAAAAACTCA TCGGGCAACC GTGGAAAAAA
GAATTTGTTG ATAAAGTGAA CAACATTGTA ATGGAACACC TCAGCGACCC TGAGTTTGGT
ATTGATGCCC TTGCCGATGC CCTAAATATG AGCACCAATC AGCTTTTCAA AAAGGTAAAA
GCGATTATGA ACACCACCCC TTACAACGTG ATTGTACAAA TACGTATGAC CGCTGCTGCC
CAACTGATGA AACAAGGCAA TTTGAACATT TCGGAAGTAG CCTATAAGGT GGGGTATCAA
GAGCTATCGA ATTTCAGTCG TTCGTTTAAG AAGTTTTACA ATGCCTCACC GCGAGAGTAT
TTGAAAGGAG AAAGTGAAAT CTGA
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| Protein sequence | MRKLLYIIWV LFPALLSAQD WAYLSKITTH NGLVSNEVTS MLQDSKGFIW IGTDDGLHKF
DGYDITVYKH NSTQKNSLAG NSIRCLFEDS QHNLWIGLKG EGLSKLNLRT GVFTTYKHQK
GSKSLSYNDV AGIVEDEAGM IWIAVDRGGL DMLNPKTGVF THYDIREKGT SKPLNNALTG
MVATNGTLIL SSWGGGVYSF NRKEKQFELH PYWHTNDTDE KVCKHIFNLY KDPEGTVWVS
SAHGGLYSLN EKTKNYQRYA VCGASHCTHN VNVLSVADDG QHNIWIETNE GIKLLNKNTH
TITDLQNPQL ANESVNHIYR DKSQLMWVST ASGIYYFSPT PAQFKWVRYK NFLSEKQVRA
IFKDSKGNLW IGGLNHIDKL NPDRKTLTAF SNQSYNPNTQ LYQAFCEDAE GNIWIGNYAN
YLIKYNPSSN SFSQVPIPVP TGTNYTYRNI YQITKDWDNS FWLATELGAI NYQPATGVFT
PLFESKNIIY PEDKTHVIHR DQDLLLWVGT EKGLRCYTRD LKLKHTYTAL KNNTHALSND
FITAIHESKD GTLWIGTKGG LHKFDKKTER FELIRRKGTD YGDPIFGLAE DNSGNLWMST
PSAVLKYSPK SQQFQVFNEY DGLQNSGFQL GAFAQAKDGE LLIGGKDGFN TFYPQQLTLN
QTQPKVVISD FQIFNKSVRP EEGGVLTEVI DETQSIHLKH WQSVISFRFS ALNYRASFKN
QYAYMLEGFD SDWIYDASER IATYTNLNPG TYIFKVKATN NDGVWSEKPT TIKIIVAPPL
WRTTWAYILY ALLGVGLLVL IVKYYTIKER DKQNLRISQL EAQRMYEINE MKTNFFSNIS
HEFKTPLSLI VGPLNQMVDD ENSPKEYKDK YTMMLRNAQK LMRLINQLLD FRKLEKNKLE
LNLQYDDVVK FVKGVSETFA YLALEKQIQY TIKSTMPSLW MPFDADKLDK ILYNLIGNAF
QYTPEKGAIT VLIATVVQNQ QKFLQIKIAD TGIGISKEEQ KQLFTAFLQG KRQKELHNEG
AGLGLAFTKD LVDLHQGHIE VESEEKQGAT FTVLLPILDV PQLHDEASIT LQQIDTTQTV
KEIAPQENAT DKEETILVVE DNDDMRDYIQ HILNEHFHVL LARDGEEGLE LAIAHIPDLI
VSDIMMPKRD GISMVKELRA NEKTNHIPII LLTALDKESQ VVEGYSLGVE DYITKPFSAK
ILSKRIENIL LSRKKLWEQY SSSSDLNVYR EKLIGQPWKK EFVDKVNNIV MEHLSDPEFG
IDALADALNM STNQLFKKVK AIMNTTPYNV IVQIRMTAAA QLMKQGNLNI SEVAYKVGYQ
ELSNFSRSFK KFYNASPREY LKGESEI
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