| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1086 |
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| Symbol | |
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| ID | 3678560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1320327 |
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| End bp | 1324622 |
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| Gene Length | 4296 bp |
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| Protein Length | 1431 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637716422 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_321605 |
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| Protein GI | 75907309 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAC TGATGCGATC GCGCGACTGG TCGCAAACGT CTCTCGGTGC GGTGGAAACT
TGGTCACAGA GCTTGAAAAC AGCCGTACGC ATTATGTTGA CTTGTCGCCA AGCTATGTTT
GTTTGGTGGG GAAACAACCT AATCAACCTC TACAACGATG CCTATAGAGC GATTCTCGGC
GGTAAACATC CAGAGGCTCT AGGTCAAAGA GCTGCCGTCG TCTGGCAAGA AATTTGGGAT
CAAGTGGGGC CTCGTGCAGA AACAGCGCTC TTTCAAAATC AGGGTACTTA CGATGAAGCC
TTGCTGCTGA TTATGGAACG TAATGGCTAC CCAGAGGAAA CCTACTACAC TTTTTCCTAT
AGTCCTGTTC CCAATGATGA TGGCGGCATC GGTGGTATTA TCTGCGCCAA TACAGAAGAT
ACATCCCGCA TTATTGGAGA GCGCCAATTG GCACTGTTAA AGGATCTGGC AGCCAAAACG
GCAGACGCTC AAACATTTGA TGAAGCCTGC ATTTTCAGCA CCAAATGTCT GGCAACTAAC
CCCTACGATC TGCCCTTTGC GATGATTTAT CTGGTTGATC CAAAGCAGCA GTGTGTGACT
TTAGCCGGAA CTTGCGGAAT TGAGCGAGGA CACCAAGCTG TTCCTGAAAC AGTTGCCCTA
GAAGAAAATT CTTTTTGGCG CTTTGCAGAG GTGTTAACAA CTCATAAACC CTATCTGATC
TCTGATTTAC AATTACAATT CCCTGATCTG CCAACGGGAG CCTGGAATAG ACCACCCCAT
CAGGCGGCTG TAGTACCCAT CGCACCATCG GGACGCATGG GCAAAGCTGG GGTATTAGTG
GCGGCTTTAA ACCCATTTCG CCTGTTTGAT GATAACTATC AAGGATTTCT AAATTTAGTT
TCGGCGCAAA TTGCTGCCAG TATTGGCAAT GCTCAAGCCT ATGAGGAAGA ACGCAAACGC
GCCGAAAAGT TAGCAGAACT CGATCGCGCC AAAACCACTT TCTTTAGCAA TGTTTCCCAC
GAATTTCGGA CTCCCTTGAC TTTAATGTTG AGTCCGTTAG AAGAGCTATT GACAGCAGAT
GATCTGTCAC AAGAGCAACG ACAGGAAATG ACCTTGATCC ATCGCAATGG CTTACGCCTG
TTGAAGTTGG TAAATACATT ACTAGATTTT TCTCGTATTG AAGCCGGACG AGTGCAAGCG
GTTTATGAAC CCACAGACTT ATCCACTTTC ACCGCCGAAT TAGCCAGTAT CTTTCGCTCG
GCGATCGAGC AAGCAGGCTT ACAGTTTAGT GTCACCTGTG AACCACTGCC AGAATTAGTC
TATGTTGATC GCCAAATGTG GGAGAAGATT ATCCTCAATC TCCTCTCGAA TGCCTTTAAA
TTCACCTTTT CCGGAGCGAT CGCCCTTACC CTGCGGCAGG TACAGCACCA AGTAGAAATC
ACAGTCACTG ATACAGGGAT TGGAATTCCT CAAGCAGAAT TACCCCACTT GTTTGAGCGG
TTTCACCGCG TCGAGGGAGC GCGGGGCAGA ACCCAAGAAG GTTCAGGAAT TGGACTAGCA
TTAGTACAGG AGTTAGTGCG CCTGCATGGT GGTCAGGTGC AAGTTGATAG CCTTGAAGGT
CTAGGCACTA CCTTTACTAT CACCGTGCCG ATGGGAATAG CCCACTTACC ACCTGAACGA
ATTCAGGCAA CACGAACCTT AGTTTCTACT GCATTAGGTG CGGCTCCTTA CATTGAAGAA
GCTTTAAGCT TGTTACCAGC AATAAAGAAT AGTGAGGCAT CATATTTATC ACCGCTCACC
CATAACCTAT CTTCCTCTGC CCGTATTCTT CTGGTCGATG ACAACGCCGA TATGCGGGAA
TATGTGAAGC GATTGCTGAG TAGACATTAT GTGGTAGAGA CTGCCACCGA CGGTCTGGCG
GCATTAGAGG CGTTGGCTGA TCATCTACCG GATTTGGTGC TAACGGATGT GATGATGCCC
CGTCTGGATG GCTTTGGTCT GCTCAGTGCC TTGCGGAGTA ACAATCGCAC CCGTGAAATT
CCCATCATTT TGCTTTCTGC CAGAGCCGGA GAAGAGGCAA AAGTGGAAGG ATTAGAAGCT
GGAGCCGATG ATTATCTGAT TAAGCCGTTT TCTGCCCGTG AACTATTAGC GCGAGTTGAA
GCAACATTAA AGCTGGCGCA ATTACGGCGA GATGCTATGG AGCAGCAGCA GACCTTGCGA
CAAGAAGCAG AAACAGCAAA GCAGAATGTG GAAACTATCT TGTCAAGTAT TAATGATGGC
TTTTATGTCC TCGATCGCGA CTGGCGATTT ACCTATGTCA ACGATCGCTT GTGCAAGATA
ATTAGCATGG AACGCGAGGA TATTCTCAAT CACAGCATTT GGGATTTATT TGCAGATACT
ATTGGCACTG ATATTGATCT TCAATTTCAA CGAGCGTTTA ATGAACAAAC ATCAGTCCAG
TTTGAGTATC TTTATGTCAC CTGGAATCGT TGGTATGAAC ACCGGGTTTA TCCTTCGCCT
GATGGACTGA CGGTTTTTGC TGCTGATATC ACCGAACGCA AACAAGCTGA ACTGGAACGC
GAACAACTGC TAGCCCTTGA ACGCCACTAC ATTAACCAAT TGCAGGGATT GACTAGAGCC
GCACTGGCAA TTAACTCTGC CCTTTCCGTA GAGCAAGTTT TGCAGGTGAT TACAGATCAG
GCAGCATCAA TCATTGGTTC TCACCAATCT GTTACGAGTA TGACCATCGG CCAGAACTGG
TCACAGGCAA TTAGCGCCAT TTTCTTATCT GATAAGTATA CTCAGTGGCA AAATTATGAT
GTAAAGCCAG ATAGATCAGG TATCTATGGC TGTGTCGGCC ATCTCAATCG CCCAATGCGG
ATGACGCAAG CCGAACTAGA GGCACATCCA CAGTGGCGAG GCTTTGGCAA AGAGGCAAAA
AACCATCCCC CTCTGCGTGG CTGGCTGGCG GCTCCCCTGG TAGGGCGGAA CGGGCAAAAC
ATTGGCTTGA TTCAGCTTTC AGACAAATAT GACGGTGAAT TTACTGCCGC AGACGAAGCA
GTCCTGGTGC AGTTAGCACA AATGGCTTCT GTGTCCGTGG AAAATGTCAG GTTATACGAA
GCTGAAAAAC AAGCACGGTC GGCAGCCGAA GCCTCACGAG AAGAAGCCGA AGCGGCAAAC
CGGATTAAAG ATGAATTTTT AGCCGTGCTG TCCCACGAAT TGCGATCGCC CCTCAACCCG
ATTCTGGGTT GGTCAAGACT GTTGCAAAAT GGCAAGCTAG ACGAAGCAAA AGCCAAACAA
GCTGTGAATA TCATCGAGCG TAATGCCAAG CTGCAAGTCG AATTGATTGA AGACCTCTTA
GATATCTCGC GGATTCTACA GGGGAAACTC AGCCTAACAA GCAGCCCGAT TAATTTAGCA
TCAGTGATTA AAGGGGCGAT CGAAACTGTA CGACTGGCAG CAGAAGCTAA TTCCATTCGT
ATTGAAGTCA ATCTTGATGG GGAAATAGGA CTAGTTTCTG GCGACTCAAC CCGCTTACAG
CAAGTGATGT GGAACTTGCT CTCTAATGCT GTTAAGTTTA CACCCACAGG TGGTTTGGTG
GAGATACGCT TAGAACAAGT TGGTAATCAA GCTCAAATTA GCGTTAGTGA TACTGGTAAA
GGTATTTCTC CCGATTTTAT ACCTTATGTG TTTGATTATT TTCGCCAAGC AGATAGCGCC
ACTACTCGGA AATTTGGTGG GCTAGGATTG GGTTTGGCGA TCGTGCGTCA TTTAGTTGAG
CTACATGGTG GCACTATTCA CGCAGAGAGT CAGGGTGAAG GTATGGGAGC TACATTCACC
CTGAAGTTGC CACTCTTACC TACTCAGCTG ACTGTCAATC CAGATTCTCC ATTGTTAGAA
CTATCCCTGG GTTTACATGG TATCCAAGTT TTAGTAGTAG ATGATGATAC CGATACACGC
GAATTTGTGG CTTTTCTCTT GGAACAAGCA GGGGCAAGGG TAATCACAGC AGTTTCCGCG
CTTGAAGCAT TGCAAGTCTT TACCCAATCC CCACCCGATA TCCTCCTGAG TGATATCGGG
ATGCCAGACA TGGACGGCTA TATGTTGATG CGGCAGATCA GAGCCTTGCC ACCAGATCAG
GGCGGAAAGA TTCCGGCGAT CGCCCTAACA GCCTATGCTG GGGAAATAGA CGAAAAGCGG
GCATTAAAAG TGGGGTTTCA AAGGCATATT TCTAAGCCAG TAGACCCAGA CAATTTAATT
AGGGCGATCG TTAACTTAAT TGATATAAAA ATTTAA
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| Protein sequence | MAALMRSRDW SQTSLGAVET WSQSLKTAVR IMLTCRQAMF VWWGNNLINL YNDAYRAILG
GKHPEALGQR AAVVWQEIWD QVGPRAETAL FQNQGTYDEA LLLIMERNGY PEETYYTFSY
SPVPNDDGGI GGIICANTED TSRIIGERQL ALLKDLAAKT ADAQTFDEAC IFSTKCLATN
PYDLPFAMIY LVDPKQQCVT LAGTCGIERG HQAVPETVAL EENSFWRFAE VLTTHKPYLI
SDLQLQFPDL PTGAWNRPPH QAAVVPIAPS GRMGKAGVLV AALNPFRLFD DNYQGFLNLV
SAQIAASIGN AQAYEEERKR AEKLAELDRA KTTFFSNVSH EFRTPLTLML SPLEELLTAD
DLSQEQRQEM TLIHRNGLRL LKLVNTLLDF SRIEAGRVQA VYEPTDLSTF TAELASIFRS
AIEQAGLQFS VTCEPLPELV YVDRQMWEKI ILNLLSNAFK FTFSGAIALT LRQVQHQVEI
TVTDTGIGIP QAELPHLFER FHRVEGARGR TQEGSGIGLA LVQELVRLHG GQVQVDSLEG
LGTTFTITVP MGIAHLPPER IQATRTLVST ALGAAPYIEE ALSLLPAIKN SEASYLSPLT
HNLSSSARIL LVDDNADMRE YVKRLLSRHY VVETATDGLA ALEALADHLP DLVLTDVMMP
RLDGFGLLSA LRSNNRTREI PIILLSARAG EEAKVEGLEA GADDYLIKPF SARELLARVE
ATLKLAQLRR DAMEQQQTLR QEAETAKQNV ETILSSINDG FYVLDRDWRF TYVNDRLCKI
ISMEREDILN HSIWDLFADT IGTDIDLQFQ RAFNEQTSVQ FEYLYVTWNR WYEHRVYPSP
DGLTVFAADI TERKQAELER EQLLALERHY INQLQGLTRA ALAINSALSV EQVLQVITDQ
AASIIGSHQS VTSMTIGQNW SQAISAIFLS DKYTQWQNYD VKPDRSGIYG CVGHLNRPMR
MTQAELEAHP QWRGFGKEAK NHPPLRGWLA APLVGRNGQN IGLIQLSDKY DGEFTAADEA
VLVQLAQMAS VSVENVRLYE AEKQARSAAE ASREEAEAAN RIKDEFLAVL SHELRSPLNP
ILGWSRLLQN GKLDEAKAKQ AVNIIERNAK LQVELIEDLL DISRILQGKL SLTSSPINLA
SVIKGAIETV RLAAEANSIR IEVNLDGEIG LVSGDSTRLQ QVMWNLLSNA VKFTPTGGLV
EIRLEQVGNQ AQISVSDTGK GISPDFIPYV FDYFRQADSA TTRKFGGLGL GLAIVRHLVE
LHGGTIHAES QGEGMGATFT LKLPLLPTQL TVNPDSPLLE LSLGLHGIQV LVVDDDTDTR
EFVAFLLEQA GARVITAVSA LEALQVFTQS PPDILLSDIG MPDMDGYMLM RQIRALPPDQ
GGKIPAIALT AYAGEIDEKR ALKVGFQRHI SKPVDPDNLI RAIVNLIDIK I
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