Gene Mboo_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1936 
Symbol 
ID5410259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2002256 
End bp2002921 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID640869176 
Productresponse regulator receiver protein 
Protein accessionYP_001405094 
Protein GI154151476 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.941096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTA CTATCCTGAT TGTGGATGAC AGCCCGTTCA TTGTCGATGG TCTTGCAGCG 
ATCCTTACGC GGAAGGGCTA CACCCCGCTA TCCGCTAATG GCGGGGATGA CTGTCTTTCC
GTTCTTAAGA CCGTGACCCC GGATCTTATA CTGCTGGATA TCATGATGGA ACCGATGGAC
GGGTGGGAGA CACTGGAAAA GATCCGTGAG AATCCGGTGA CAAAAGATAT TCCTGTGCTG
ATGTTCTCGG CAAAAAAAAT TACGCCCGAT GAGGCCCGGG AGCACAGCAT GAACATCGAC
GATTTTGTCT CAAAACCCGT CAGCCCGGCG CAGCTTCTAG AATCGATCCA GCGGATCTTC
TCTCGGAGAA ATGATGTGCT GCTTGCGCGC CTTGCGGCAC AGGACAAAGG GATGGATACC
ACAATCATAG ATGAATATGC CCTTCTCCGC AAGAATGTCG AAGTTAACCG GAACCTCCTT
TCAGTTCTCC GTGCAGCAAG CGGGATCGAT CTGCCGGGAC GTGAAGTCTC GCGCGAGGAC
AGGGATGCAA TCCGGAACCT CGAGGACAAA GTGTATGCCG AGGAGCGAAG GCTGCGAGAA
ATTCATGATC TGGTTGAAAA GGTGCAACCC CCTGTTCTGG AAACAAAAAA ACCGGAAGGG
CTCTGA
 
Protein sequence
MDATILIVDD SPFIVDGLAA ILTRKGYTPL SANGGDDCLS VLKTVTPDLI LLDIMMEPMD 
GWETLEKIRE NPVTKDIPVL MFSAKKITPD EAREHSMNID DFVSKPVSPA QLLESIQRIF
SRRNDVLLAR LAAQDKGMDT TIIDEYALLR KNVEVNRNLL SVLRAASGID LPGREVSRED
RDAIRNLEDK VYAEERRLRE IHDLVEKVQP PVLETKKPEG L