Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1936 |
Symbol | |
ID | 5410259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2002256 |
End bp | 2002921 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640869176 |
Product | response regulator receiver protein |
Protein accession | YP_001405094 |
Protein GI | 154151476 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.941096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCTA CTATCCTGAT TGTGGATGAC AGCCCGTTCA TTGTCGATGG TCTTGCAGCG ATCCTTACGC GGAAGGGCTA CACCCCGCTA TCCGCTAATG GCGGGGATGA CTGTCTTTCC GTTCTTAAGA CCGTGACCCC GGATCTTATA CTGCTGGATA TCATGATGGA ACCGATGGAC GGGTGGGAGA CACTGGAAAA GATCCGTGAG AATCCGGTGA CAAAAGATAT TCCTGTGCTG ATGTTCTCGG CAAAAAAAAT TACGCCCGAT GAGGCCCGGG AGCACAGCAT GAACATCGAC GATTTTGTCT CAAAACCCGT CAGCCCGGCG CAGCTTCTAG AATCGATCCA GCGGATCTTC TCTCGGAGAA ATGATGTGCT GCTTGCGCGC CTTGCGGCAC AGGACAAAGG GATGGATACC ACAATCATAG ATGAATATGC CCTTCTCCGC AAGAATGTCG AAGTTAACCG GAACCTCCTT TCAGTTCTCC GTGCAGCAAG CGGGATCGAT CTGCCGGGAC GTGAAGTCTC GCGCGAGGAC AGGGATGCAA TCCGGAACCT CGAGGACAAA GTGTATGCCG AGGAGCGAAG GCTGCGAGAA ATTCATGATC TGGTTGAAAA GGTGCAACCC CCTGTTCTGG AAACAAAAAA ACCGGAAGGG CTCTGA
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Protein sequence | MDATILIVDD SPFIVDGLAA ILTRKGYTPL SANGGDDCLS VLKTVTPDLI LLDIMMEPMD GWETLEKIRE NPVTKDIPVL MFSAKKITPD EAREHSMNID DFVSKPVSPA QLLESIQRIF SRRNDVLLAR LAAQDKGMDT TIIDEYALLR KNVEVNRNLL SVLRAASGID LPGREVSRED RDAIRNLEDK VYAEERRLRE IHDLVEKVQP PVLETKKPEG L
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