More than 300 homologs were found in PanDaTox collection
for query gene Rcas_0674 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_0674  response regulator receiver protein  100 
 
 		 120 aa  236  5.999999999999999e-62  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0682036 
 
 
-
 
NC_009523  RoseRS_0161  response regulator receiver protein  82.5 
 
 		 132 aa  203  5e-52  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0206  response regulator receiver protein  54.95 
 
 		 123 aa  131  1.9999999999999998e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.164513  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  42.73 
 
 		 228 aa  105  2e-22  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_013385  Adeg_1897  two component transcriptional regulator, winged helix family  44.55 
 
 		 229 aa  104  4e-22  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  46.36 
 
 		 229 aa  102  2e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_012918  GM21_0758  response regulator receiver protein  40.16 
 
 		 132 aa  101  3e-21  Geobacter sp. M21  Bacteria  n/a    normal  0.0540632 
 
 
-
 
NC_013510  Tcur_1461  two component transcriptional regulator, winged helix family  43.65 
 
 		 225 aa  101  4e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.616357  n/a   
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  41.96 
 
 		 232 aa  100  5e-21  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3391  two component transcriptional regulator  39.52 
 
 		 227 aa  100  7e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.141218  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  44.55 
 
 		 237 aa  100  8e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_1514  two component transcriptional regulator, winged helix family  41.74 
 
 		 229 aa  100  9e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0313038  normal  0.23375 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  41.18 
 
 		 229 aa  100  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  44.55 
 
 		 236 aa  99.4  1e-20  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  38.74 
 
 		 223 aa  98.6  2e-20  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  45.45 
 
 		 229 aa  99  2e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.00709514 
 
 
-
 
NC_011146  Gbem_0743  response regulator receiver protein  40.52 
 
 		 132 aa  98.6  3e-20  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1751  two component transcriptional regulator, winged helix family  39.29 
 
 		 234 aa  98.6  3e-20  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0759  two component transcriptional regulator  38.94 
 
 		 223 aa  98.6  3e-20  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00128917  n/a   
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  40.34 
 
 		 229 aa  97.8  5e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.14031 
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  40.91 
 
 		 232 aa  97.1  7e-20  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2286  response regulator receiver protein  43.12 
 
 		 263 aa  97.1  7e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.0000997036 
 
 
-
 
NC_008148  Rxyl_0783  two component transcriptional regulator  39.09 
 
 		 231 aa  97.1  7e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  41.8 
 
 		 227 aa  97.1  8e-20  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  44.25 
 
 		 225 aa  96.7  9e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_013093  Amir_6208  two component transcriptional regulator, winged helix family  41.82 
 
 		 226 aa  96.7  9e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1285  two component transcriptional regulator, winged helix family  40.35 
 
 		 234 aa  96.7  9e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.477652  n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  41.82 
 
 		 231 aa  95.9  1e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  42.2 
 
 		 236 aa  96.7  1e-19  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  40.16 
 
 		 227 aa  96.7  1e-19  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_013739  Cwoe_5515  response regulator receiver protein  42.98 
 
 		 134 aa  96.7  1e-19  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  40 
 
 		 235 aa  95.5  2e-19  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_013174  Jden_1802  two component transcriptional regulator, winged helix family  44.64 
 
 		 232 aa  95.5  2e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  0.150286  normal  1 
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  40 
 
 		 235 aa  95.5  2e-19  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  40 
 
 		 235 aa  95.5  2e-19  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  40 
 
 		 235 aa  95.5  2e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  40 
 
 		 235 aa  95.5  2e-19  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  44.55 
 
 		 237 aa  95.9  2e-19  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  42.61 
 
 		 242 aa  95.5  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.114994 
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  42.73 
 
 		 227 aa  95.5  2e-19  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  40 
 
 		 235 aa  95.5  2e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_013204  Elen_3009  two component transcriptional regulator, winged helix family  44.04 
 
 		 236 aa  95.9  2e-19  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.333093 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  40 
 
 		 235 aa  95.5  2e-19  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  40 
 
 		 238 aa  95.5  2e-19  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  42.98 
 
 		 230 aa  95.5  2e-19  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_009674  Bcer98_0503  two component transcriptional regulator  39.64 
 
 		 223 aa  95.9  2e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  42.98 
 
 		 230 aa  95.5  2e-19  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal  1 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  40 
 
 		 232 aa  95.5  2e-19  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  42.98 
 
 		 230 aa  95.5  2e-19  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.354926 
 
 
-
 
NC_009439  Pmen_2476  two component transcriptional regulator  43.36 
 
 		 227 aa  95.9  2e-19  Pseudomonas mendocina ymp  Bacteria  normal  0.210757  normal  0.512741 
 
 
-
 
NC_009523  RoseRS_1527  response regulator receiver protein  41.67 
 
 		 257 aa  95.1  3e-19  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.284005 
 
 
-
 
NC_009656  PSPA7_4952  putative two-component response regulator  43.36 
 
 		 227 aa  94.7  3e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_56950  putative two-component response regulator  43.36 
 
 		 227 aa  95.1  3e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  40 
 
 		 235 aa  94.4  4e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_013411  GYMC61_2522  two component transcriptional regulator, winged helix family  41.28 
 
 		 226 aa  94.4  4e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1656  response regulator receiver protein  38.53 
 
 		 166 aa  94.7  4e-19  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  40 
 
 		 235 aa  94.7  4e-19  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  43.64 
 
 		 245 aa  94.4  4e-19  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0926269 
 
 
-
 
NC_009767  Rcas_0421  two component transcriptional regulator  43.64 
 
 		 245 aa  94.4  4e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0518956  normal  1 
 
 
-
 
NC_011886  Achl_1708  two component transcriptional regulator, winged helix family  41.8 
 
 		 228 aa  94.7  4e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.476364 
 
 
-
 
NC_004578  PSPTO_4374  DNA-binding response regulator ColR  42.48 
 
 		 227 aa  94.4  5e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  40 
 
 		 235 aa  94.4  5e-19  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_007005  Psyr_4070  response regulator receiver:transcriptional regulatory protein, C-terminal  42.48 
 
 		 227 aa  94.4  5e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0290724  normal  1 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  40 
 
 		 235 aa  94.4  5e-19  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011830  Dhaf_0287  two component transcriptional regulator, winged helix family  42.98 
 
 		 229 aa  94.4  5e-19  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00220806  n/a   
 
 
-
 
NC_002947  PP_0901  winged helix family two component transcriptional regulator  42.48 
 
 		 227 aa  94  6e-19  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_4486  two component transcriptional regulator  42.48 
 
 		 227 aa  94  6e-19  Pseudomonas putida GB-1  Bacteria  normal  0.643247  normal  0.864162 
 
 
-
 
NC_010501  PputW619_0969  two component transcriptional regulator  42.48 
 
 		 227 aa  94  6e-19  Pseudomonas putida W619  Bacteria  normal  1  normal  0.0722332 
 
 
-
 
NC_009512  Pput_0940  two component transcriptional regulator  42.48 
 
 		 227 aa  94  6e-19  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_0042  response regulator  42.86 
 
 		 240 aa  94  6e-19  Bifidobacterium longum DJO10A  Bacteria  normal  0.382747  n/a   
 
 
-
 
NC_008009  Acid345_0509  two component transcriptional regulator  39.09 
 
 		 232 aa  94  6e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163629  normal  1 
 
 
-
 
NC_008346  Swol_1681  response regulator receiver protein  44.04 
 
 		 227 aa  94  6e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0956507  n/a   
 
 
-
 
NC_013946  Mrub_1103  two component transcriptional regulator, winged helix family  42.02 
 
 		 227 aa  94  6e-19  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  35.45 
 
 		 228 aa  94  6e-19  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_010511  M446_3554  response regulator receiver protein  38.33 
 
 		 125 aa  94  7e-19  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0426067 
 
 
-
 
NC_013739  Cwoe_5381  two component transcriptional regulator, winged helix family  42.86 
 
 		 235 aa  94  7e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.0242785  normal  1 
 
 
-
 
NC_007644  Moth_1131  two component transcriptional regulator  43.81 
 
 		 226 aa  94  7e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1673  two component transcriptional regulator, winged helix family  40.91 
 
 		 233 aa  93.6  7e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  41.96 
 
 		 229 aa  94  7e-19  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal  1 
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  42.73 
 
 		 235 aa  93.6  7e-19  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_012560  Avin_17800  response regulator, transcriptional regulatory protein (two-component), ColR  43.36 
 
 		 227 aa  93.6  8e-19  Azotobacter vinelandii DJ  Bacteria  normal  0.0435874  n/a   
 
 
-
 
NC_014212  Mesil_2637  two component transcriptional regulator, winged helix family  42.86 
 
 		 227 aa  93.6  8e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  40.91 
 
 		 230 aa  93.6  8e-19  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  42.98 
 
 		 231 aa  93.6  8e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_007604  Synpcc7942_1817  response regulator receiver domain-containing protein  39.66 
 
 		 121 aa  93.6  9e-19  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.202035 
 
 
-
 
NC_013440  Hoch_3141  PAS/PAC sensor hybrid histidine kinase  40 
 
 		 1406 aa  93.6  9e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.367834  normal  0.195519 
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.75 
 
 		 244 aa  93.6  9e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.132168 
 
 
-
 
NC_011886  Achl_2443  two component transcriptional regulator, winged helix family  41.23 
 
 		 224 aa  93.6  9e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00121019 
 
 
-
 
NC_009253  Dred_0323  two component transcriptional regulator  38.33 
 
 		 227 aa  93.6  9e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5447  response regulator receiver protein  42.73 
 
 		 228 aa  92.8  1e-18  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00883739  normal  0.15212 
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  43.64 
 
 		 236 aa  93.2  1e-18  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_013131  Caci_7562  two component transcriptional regulator, winged helix family  42.2 
 
 		 273 aa  93.2  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.320599  normal  1 
 
 
-
 
NC_007952  Bxe_B1748a  hypothetical protein  39.47 
 
 		 223 aa  92.8  1e-18  Burkholderia xenovorans LB400  Bacteria  normal  0.0697031  normal  0.305387 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  44.17 
 
 		 227 aa  93.2  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal  1 
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  42.86 
 
 		 228 aa  92.8  1e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_011886  Achl_2924  two component transcriptional regulator, winged helix family  39.82 
 
 		 265 aa  92.8  1e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  40.71 
 
 		 326 aa  92  2e-18  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_10999  two component response transcriptional regulatory protein MprA  42.15 
 
 		 230 aa  92.4  2e-18  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000188235  normal  0.671639 
 
 
-
 
NC_009972  Haur_3061  two component transcriptional regulator  42.73 
 
 		 227 aa  92  2e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.799336  n/a   
 
 
-
 
NC_011729  PCC7424_1341  two component transcriptional regulator, winged helix family  36.36 
 
 		 226 aa  92.8  2e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>