| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1604 |
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| Symbol | |
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| ID | 8225175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1935856 |
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| End bp | 1938570 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929460 |
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| Product | two component transcriptional regulator, AraC family |
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| Protein accession | YP_003086012 |
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| Protein GI | 255035391 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTG CGCTGATCGC TTTGCTGTTG CTCACGCTGT TTGCAGGCTG TGCCGGGAAA
CAGGAGGACG CGTATGTGAT CGGCTTTTCG CAATGCACCG GCGACGATGA ATGGCGGCGG
GCCATGCTCG ACGGTATGCA ACGCGAACTC GCATTCCACA ATAATACGAA ACTGATTTTC
AGGGACGCCC ACGCGAACAG CGCTGTCCAG GTGAAGCAGA TCGAAGAATT GCTGCGAAAC
GGCATTCACC TGCTGATCGT CTCGCCGAAC GAGTCGGACC CGCTCACACC GGTGATCGAA
AAGGCTTATA AGCAGGGCGT TCCCGTAGTG GTGGTCGACC GGCGCACATC CTCACCCTAT
TACACGGCAT ATGTGGGCGG CGACAACTAC CAGGTAGGCA AAACCGTGGG CGAATACGCG
GCCGCGCTGC TGGGCGGCAA CGGCAAGATG ATCGAGATTA CCGGCCTGCC CCGCTCCTCG
CCTGCCTCCG ACCGCCACCG CGGCCTTGTG GACGCCCTCG CAACCCGCCC GAGCATCCGC
CGCGTAGCCA CGCTGAACGG CCAGTGGCAG AAGGACATTG CCAAAAGCGA ACTGCGAAAA
GTCCTGCCCC GCTTCCCCGA TCTCGACCTG ATATTCGCCC AGAACGAGGT GATGGCAATG
GGTGCCCGCG AGGTTTGCAA CGATATTTTT CCCGACCGCA AGATCCGCGT GATCGGCGTC
GACGGGCTGC CCGGGCAATT CGGCGATATT CAAATGGTGT ACGACGGCCA CATTACCGCC
ACGGCCCTTT ACCCCACGGG CGGCGAGGAA GCGGCGCGCG TGGCGATGAA TATCCTTCAA
AAACAACCCT ACCAAAAAGA AAACCTGCTG CAAACGGCCA TTATCGACTC GTCCAACGTG
CGGATGATCA AGATGCAGAC GGACAAGATG ATTTCGCAGC AAAACGATAT CGAGCGGCAG
CAGGCGCGGA TTGACGAACA GCTGGAAATT TACCAAACCC AGCGCGGCCT GTTATACGTG
ATGACGGGCC TGTTTATCGT GTCGATCATC CTCGGCTCGG TTGCATTGTA TTCGCTGATC
GAGAACAAGA AGATCAACCG CGAGCTGAAT TCCAAAAATG AAGAAATCGT TGTCCAGCGC
AATCGCATTC AGGATATTGC GGAGAAGGCG CAGGAAGCGA CCGAGTCGAA ATTCAGGTTT
TTTACAAACA TTTCCCACGA ATTCAGGACG CCCCTCACGC TGATCCTCGG GCCGGTGGAA
GAGCTGCTGC GACAAAAGAA CGAGTCTCCG GCTGTGCGGA AAAACCTTTC GCTGGTTCAG
AAAAATGCTA CGCGGCTGCT ATGGCTGGTC AATCAGCTCA TGGATTTCCG CAAGATCGAA
AGCGGCAAGA TCCGCTTGCA GGTTTCGGGC AACGATATGG TGGCGTTTGT GCGCGAGCTC
ATGTTGCCGT TCGATCAGGT TGCACGCAAG CGCCGCATTG ATTTCCGCCT CGTTACCGCC
TTGCCCGCGC TGGAAGTGTG GTTCGACCGC GATATGATGG ATAAGGTGTT TTTCAACCTG
CTTTCCAATG CATTCAAATT CACGCCCGAC TGGGGCCGCA TTTACATTCA TATTTCGCAA
GCGGGGGAAA ATGTCGTCGT CAGCGTGCAG GACAATGGCT CGGGGCTGAG CGATGCGGAC
ATGGCCGGGG CTTTTGAGAT GTTTTACCAG GGAAAAAACT CCACCAAAGG CACCGGACTG
GGCCTGCCGC TCTCGCGCGA GTTTGTAGAA CTGCACCAGG GAACGATCGC CGCAGACGGC
AAAAAGGGCG AGGGCGCCAT TTTCACGGTA ACATTGCCGC TAGGCCAGGC GCATTTCCAG
CCGGAAGACC TGGCCGACGC CGCCACCATC ACTTCGGCAT TCGGCCGGAC CGCCGTGCAA
AACGAACCGG AGCCCCAGCC TGCCCAGCCG CTCCCTGCCG ACCTGCCCTC GGTGCTGCTG
ATCGAGGATA ATGAAGATCT GCTCGGATTC GTCAACGCGC TTTTGCAGGA CCAATACCAG
GTTTCCACCG CTACCGACGG CCGCGCCGGG CTCGACCAAT GCTTCGAAAC CGTGCCCGAC
CTGGTGGTAT GCGACGTGAT GCTCCCCGGC ATGGATGGCC TCGAAATCAC CGCTGCACTG
AAATCGGATT TGCGGACGTC GCACATCCCG GTGATCCTGC TTACCGCCAA AAACACGCCC
GAACAGCAGG TGGAAGGCAT GCAGGCGCGC GCGGATATGT ACATCACGAA GCCGTTCAGC
CCGCAGTTTT TGCAGGAAAG CATCGCCAGC CTGCTCGCCA ACAGGCAATT GCTCCGGAAC
ACGCATTTCG GTCCGGGCGT GGCAGAGGCC GAAGCTGGCC TCTCGCGGCT TGATAAAAAA
TTCGTGAATG AGCTCCGCGC GCTGATCATT GCGCGGCTGG ACGATCCTGC ATTGACGGTG
GAATCGCTCG GGAAAGCGCT GGGGCTATCG CGCGTGCAGC TGTTCCGCAA AACGAAGGCG
CTGCTCGGCG GCGGTACCAA CGAGCTCATT CTGAACCTCC GGCTCGAAAA AGCCTGCACA
TTGCTCCGCA ATCCCGACCT GACCATGGCG GAAATCGCCG ATCAGACCGG GTTTACTTCT
CAAAGCTATT TTTCCACTGT TTTTAAAACC CATTTCGGTG TGTCGCCGAA AGACTGGCGG
ATGGTCAGAA GCTAG
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| Protein sequence | MRLALIALLL LTLFAGCAGK QEDAYVIGFS QCTGDDEWRR AMLDGMQREL AFHNNTKLIF
RDAHANSAVQ VKQIEELLRN GIHLLIVSPN ESDPLTPVIE KAYKQGVPVV VVDRRTSSPY
YTAYVGGDNY QVGKTVGEYA AALLGGNGKM IEITGLPRSS PASDRHRGLV DALATRPSIR
RVATLNGQWQ KDIAKSELRK VLPRFPDLDL IFAQNEVMAM GAREVCNDIF PDRKIRVIGV
DGLPGQFGDI QMVYDGHITA TALYPTGGEE AARVAMNILQ KQPYQKENLL QTAIIDSSNV
RMIKMQTDKM ISQQNDIERQ QARIDEQLEI YQTQRGLLYV MTGLFIVSII LGSVALYSLI
ENKKINRELN SKNEEIVVQR NRIQDIAEKA QEATESKFRF FTNISHEFRT PLTLILGPVE
ELLRQKNESP AVRKNLSLVQ KNATRLLWLV NQLMDFRKIE SGKIRLQVSG NDMVAFVREL
MLPFDQVARK RRIDFRLVTA LPALEVWFDR DMMDKVFFNL LSNAFKFTPD WGRIYIHISQ
AGENVVVSVQ DNGSGLSDAD MAGAFEMFYQ GKNSTKGTGL GLPLSREFVE LHQGTIAADG
KKGEGAIFTV TLPLGQAHFQ PEDLADAATI TSAFGRTAVQ NEPEPQPAQP LPADLPSVLL
IEDNEDLLGF VNALLQDQYQ VSTATDGRAG LDQCFETVPD LVVCDVMLPG MDGLEITAAL
KSDLRTSHIP VILLTAKNTP EQQVEGMQAR ADMYITKPFS PQFLQESIAS LLANRQLLRN
THFGPGVAEA EAGLSRLDKK FVNELRALII ARLDDPALTV ESLGKALGLS RVQLFRKTKA
LLGGGTNELI LNLRLEKACT LLRNPDLTMA EIADQTGFTS QSYFSTVFKT HFGVSPKDWR
MVRS
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