| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1478 |
|---|
| Symbol | |
|---|
| ID | 5409860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1520987 |
|---|
| End bp | 1522267 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640868713 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001404639 |
|---|
| Protein GI | 154151021 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.274981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTT TATCCGGATT CACAATTATC TGTCTGTGTC TTCTCCTTCC CGTTCTCACC
GGTATTGTTG CAGCCGACTC TCCCCAGTAC GACAAATACG TAAGTCTCCA TATGAATATC
GACAATGGGA ACTTCACCAC AAACTCCACG GGAATATATT ACGGCTCCGC ATCGAATCTC
TTCCCTGCGC AGCCGGGCTT CAGAGCGGAA CTGGTCGCTG CCAATGGTTC AATTGTGAAA
ACGTTCACAG TCTGGGACCC GAGAGTCCAG TACGGGGATT TCAGAAGCTC AGACGGCCAG
ATCCTGGGCG TTGTGGATCG CCGGAATTCA ACAGATTTTG TCGTCACCTT CCCGTTCGAC
CGGAACGTTA CCGGGTTCAT GCTGTATAAT CCTGCAGGAG GAGCGCTCCT CGCCTCGGTG
GACTTAAAAC CCCAAATCGA TTCATTCTTT GCGGATTACC CAAATGATCC CGATAATCCT
GCATCGTTCG AATCAAAAGC GCCGGTAAAT GTAAATCCGC CCCGGGCCAG TTTGCCGGGA
TCTGATGCAT CGATGTACGG GCAACTCTGG GGAATACTGG TCATAGGATC CGGGGCTATG
CTCCTCTTTG CGGGGATATT TGTGTATATC CGGTACCTGC GGGTGAGACC CAAAAGTGTT
CTCATAGTTG ATGACGACCA GGATATTATC GACGTGGTTG ATGGACTCCT CAAAATAGAA
GGATATACCA CCCGGACCGC CACGAGCGGT GGGGAGTGCC TTAAGCAACT CGCATCTGCA
GTCCCCGATC TCATCCTGCT TGATATCGGT ATGGAACCAA TGGACGGATG GGAAACCATC
AGGGAGATCA AGAAAAACAC GGCAACCCGG GGCATCCCGG TTATCATGCT CACGGCACTG
CGGCTTACGC CAAAGGATGT TGAAAATTAT GCAATATGCA TTGAAGATTA TGTCTTGAAA
CCGGTAACCC GCGAGGGGCT GGTGGATGCA ATAACGCATG TATTTGGGCG ACGGCAGATG
ATCGAGGAGA AAATTGCCGC TGCAAAAAGA GCCGGTATCG ATCGGGATAA ACTCTGTGAA
CATGCCCGTC TTACCCGGGT TGTAGATGTC AATAAACGAT TATGGGACCT CCTTGTCAGG
ACCTATCATC TGGACACAGA TACTCCGGAG CCCGAAAGCG AGATAGGAAT TGCCATTAAG
AATGCGGAAA GGAAAATACG GGATCAGGAG CACCGGCTCA AACAGATTGA GAGGAGTCTT
GGTTCAGGTG CAGACCAGTG A
|
|---|
| Protein sequence | MKSLSGFTII CLCLLLPVLT GIVAADSPQY DKYVSLHMNI DNGNFTTNST GIYYGSASNL
FPAQPGFRAE LVAANGSIVK TFTVWDPRVQ YGDFRSSDGQ ILGVVDRRNS TDFVVTFPFD
RNVTGFMLYN PAGGALLASV DLKPQIDSFF ADYPNDPDNP ASFESKAPVN VNPPRASLPG
SDASMYGQLW GILVIGSGAM LLFAGIFVYI RYLRVRPKSV LIVDDDQDII DVVDGLLKIE
GYTTRTATSG GECLKQLASA VPDLILLDIG MEPMDGWETI REIKKNTATR GIPVIMLTAL
RLTPKDVENY AICIEDYVLK PVTREGLVDA ITHVFGRRQM IEEKIAAAKR AGIDRDKLCE
HARLTRVVDV NKRLWDLLVR TYHLDTDTPE PESEIGIAIK NAERKIRDQE HRLKQIERSL
GSGADQ
|
|---|
| |