More than 300 homologs were found in PanDaTox collection
for query gene Jden_0145 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_0145  short-chain dehydrogenase/reductase SDR  100 
 
 
267 aa  536  1e-151  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  57.72 
 
 
275 aa  290  2e-77  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0175  short-chain dehydrogenase/reductase SDR  53.82 
 
 
267 aa  280  1e-74  Meiothermus ruber DSM 1279  Bacteria  normal  0.319176  normal 
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  51.41 
 
 
269 aa  249  3e-65  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_009077  Mjls_0294  short-chain dehydrogenase/reductase SDR  48.87 
 
 
262 aa  248  6e-65  Mycobacterium sp. JLS  Bacteria  normal  0.948025  normal 
 
 
-
 
NC_008146  Mmcs_0303  short-chain dehydrogenase/reductase SDR  48.87 
 
 
262 aa  248  8e-65  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0313  short-chain dehydrogenase/reductase SDR  48.87 
 
 
262 aa  248  8e-65  Mycobacterium sp. KMS  Bacteria  normal  normal  0.19239 
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  46.62 
 
 
276 aa  242  5e-63  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  37.09 
 
 
278 aa  179  5.999999999999999e-44  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  40.62 
 
 
279 aa  175  7e-43  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  37.92 
 
 
281 aa  169  5e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  38.22 
 
 
296 aa  155  5.0000000000000005e-37  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  37.26 
 
 
295 aa  154  1e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  39.02 
 
 
296 aa  153  2.9999999999999998e-36  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  35.88 
 
 
295 aa  151  1e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  38.64 
 
 
296 aa  151  1e-35  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  36.12 
 
 
312 aa  150  3e-35  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  35.56 
 
 
273 aa  149  4e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  35.36 
 
 
309 aa  146  3e-34  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  35.36 
 
 
309 aa  146  3e-34  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  35.36 
 
 
309 aa  146  3e-34  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  34.6 
 
 
312 aa  145  7.0000000000000006e-34  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  38 
 
 
276 aa  145  8.000000000000001e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  34.6 
 
 
311 aa  144  1e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  36.74 
 
 
315 aa  144  1e-33  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  37.25 
 
 
276 aa  145  1e-33  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  37.25 
 
 
276 aa  145  1e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  37.25 
 
 
276 aa  145  1e-33  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  35.98 
 
 
308 aa  144  2e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  35.98 
 
 
308 aa  144  2e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  35.98 
 
 
308 aa  144  2e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  35.98 
 
 
308 aa  144  2e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  35.98 
 
 
308 aa  144  2e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  35.36 
 
 
295 aa  144  2e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  34.6 
 
 
307 aa  142  5e-33  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  34.94 
 
 
280 aa  142  7e-33  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  36.47 
 
 
300 aa  142  8e-33  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  35.74 
 
 
300 aa  142  8e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  34.96 
 
 
302 aa  141  9.999999999999999e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  34.72 
 
 
302 aa  141  9.999999999999999e-33  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  34.96 
 
 
302 aa  141  9.999999999999999e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  34.32 
 
 
276 aa  141  9.999999999999999e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  34.96 
 
 
302 aa  140  1.9999999999999998e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  35.45 
 
 
307 aa  140  1.9999999999999998e-32  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  34.96 
 
 
302 aa  140  1.9999999999999998e-32  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  35.07 
 
 
286 aa  140  3e-32  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  35.45 
 
 
302 aa  139  3.9999999999999997e-32  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  35.36 
 
 
300 aa  139  3.9999999999999997e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  35.36 
 
 
300 aa  139  3.9999999999999997e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  34.06 
 
 
271 aa  139  4.999999999999999e-32  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  34.72 
 
 
302 aa  139  4.999999999999999e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  34.66 
 
 
275 aa  139  4.999999999999999e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  32.45 
 
 
276 aa  139  4.999999999999999e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  34.72 
 
 
302 aa  139  4.999999999999999e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  35.74 
 
 
308 aa  139  4.999999999999999e-32  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  34.72 
 
 
302 aa  139  4.999999999999999e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  35.42 
 
 
273 aa  139  7e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  34.11 
 
 
275 aa  138  1e-31  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  35.74 
 
 
308 aa  137  1e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  36.15 
 
 
300 aa  136  3.0000000000000003e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  33.95 
 
 
279 aa  135  9e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  34.38 
 
 
276 aa  134  9.999999999999999e-31  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  31.62 
 
 
276 aa  133  3e-30  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  34.94 
 
 
275 aa  132  3.9999999999999996e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  35.29 
 
 
273 aa  128  9.000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  32.48 
 
 
309 aa  127  2.0000000000000002e-28  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  33.07 
 
 
271 aa  127  2.0000000000000002e-28  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  32.58 
 
 
282 aa  124  1e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_013159  Svir_33830  short chain dehydrogenase  37.24 
 
 
568 aa  122  8e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12242  short chain dehydrogenase  38.46 
 
 
592 aa  120  1.9999999999999998e-26  Mycobacterium tuberculosis F11  Bacteria  normal  0.0208017  normal  0.29752 
 
 
-
 
NC_009077  Mjls_3322  short chain dehydrogenase  37.8 
 
 
588 aa  119  4.9999999999999996e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.178301 
 
 
-
 
NC_008146  Mmcs_3311  short chain dehydrogenase  37.8 
 
 
588 aa  119  4.9999999999999996e-26  Mycobacterium sp. MCS  Bacteria  normal  0.768628  n/a   
 
 
-
 
NC_008705  Mkms_3373  short chain dehydrogenase  37.8 
 
 
588 aa  119  4.9999999999999996e-26  Mycobacterium sp. KMS  Bacteria  normal  0.855673  normal  0.12205 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  32.95 
 
 
275 aa  117  1.9999999999999998e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  35.79 
 
 
274 aa  116  3e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  29.96 
 
 
267 aa  114  1.0000000000000001e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  35.42 
 
 
274 aa  111  1.0000000000000001e-23  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  29.66 
 
 
261 aa  111  2.0000000000000002e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_3087  short-chain dehydrogenase/reductase SDR  29.08 
 
 
322 aa  110  3e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1840  short-chain dehydrogenase/reductase SDR  31.48 
 
 
279 aa  109  4.0000000000000004e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  0.205485  n/a   
 
 
-
 
NC_012856  Rpic12D_1359  short chain dehydrogenase  33.87 
 
 
602 aa  109  5e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1779  short-chain dehydrogenase/reductase SDR  32.52 
 
 
254 aa  108  7.000000000000001e-23  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1820  short chain dehydrogenase  33.2 
 
 
267 aa  108  9.000000000000001e-23  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.187339 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  36.68 
 
 
269 aa  108  1e-22  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  32.68 
 
 
266 aa  107  2e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  33.95 
 
 
274 aa  107  2e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  29.17 
 
 
339 aa  107  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_0120  short-chain dehydrogenase/reductase SDR  29.34 
 
 
354 aa  107  2e-22  Geobacter sp. M21  Bacteria  n/a    normal  0.718494 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  32.29 
 
 
238 aa  107  2e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_010682  Rpic_1295  short chain dehydrogenase  35.6 
 
 
602 aa  107  2e-22  Ralstonia pickettii 12J  Bacteria  normal  0.101432  normal  0.699766 
 
 
-
 
NC_013204  Elen_1325  short-chain dehydrogenase/reductase SDR  34.55 
 
 
260 aa  106  3e-22  Eggerthella lenta DSM 2243  Bacteria  normal  0.35072  normal  0.362703 
 
 
-
 
NC_007484  Noc_0093  glucose/ribitol dehydrogenase  35.75 
 
 
259 aa  107  3e-22  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0630  3-oxoacyl-(acyl-carrier-protein) reductase  35.94 
 
 
246 aa  106  4e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1211  short-chain dehydrogenase/reductase SDR  30.28 
 
 
250 aa  106  4e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.663428  n/a   
 
 
-
 
NC_013131  Caci_8731  short chain dehydrogenase  31.37 
 
 
590 aa  105  5e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.199229  normal  0.347677 
 
 
-
 
NC_009338  Mflv_2501  short-chain dehydrogenase/reductase SDR  35.29 
 
 
233 aa  105  7e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  30.17 
 
 
241 aa  105  8e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009669  Oant_4587  short-chain dehydrogenase/reductase SDR  31.94 
 
 
264 aa  105  9e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0960385  n/a   
 
 
-
 
NC_012029  Hlac_0964  short-chain dehydrogenase/reductase SDR  34.21 
 
 
306 aa  105  9e-22  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  32.18 
 
 
281 aa  105  9e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>