| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4587 |
|---|
| Symbol | |
|---|
| ID | 5382981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009669 |
|---|
| Strand | + |
|---|
| Start bp | 121478 |
|---|
| End bp | 122272 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640837263 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001373103 |
|---|
| Protein GI | 153011890 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0960385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTA CAAATGAACA AACCTCTTCG CCGCTCGCGG TTGTCACCGG CGGCGCAAGC
GGGATTGGCG AGGCCAGTGT GCGCGGTTTC GTGTCTGCCG GCTGGCGGGT TGTTATCGCA
GACATCAACG ACGAACGGGG AAAGGCAATC GCTGCCGAAT TGGGTGCCGC GGTCAGCTAC
CGTCATCTTG ATGTGTCTGA CGAGCAGGCG GTGACGCAAT TCAAAGAGGC AGTCTATGCA
GAGCATGGGC TTGTGTCGGC ACTTGTGAAC TCTGGCGGCA TTTTGCAGAA CGCCACCAGG
GTGACGAAAA TGCCGGTCGA GGAATTCGAT CGCATCATCG ACGTCAACCT TCGCGGAACG
ATGCTCACTG CGCGCGCCTT CGGCGAGCAG ATGGCGCAAT CGGGCGGCGG ATCGATTGTG
AACCTCTGCT CGCTGACCAC TTTCCAGCCC TGGCCACAGC CGGCATATGC CATGAGCAAA
TCGGCGCTGA AGATGCTGAC CGAAATCATG GCCGCCGAAC TTGGTCCGCA GGGTGTCCGT
GTCAATGCGG TAGCGCCCGG ATATACGATG ACCGAGGCGA TGAAGAGCCG CATCGATCGC
GGCGAACGCG ACCCCTCTGT TGTCATTTCC AGATCCGCGC TGCGACGGTT CGTCGAGCCG
AGGGAGGTTG CAGATGCAAT CTTCTTCCTG TGCTCTCCGT CCGCGTCCGC CATCACCGGG
ATCACCATTC CAATCGATGC GGGCTGGCTG GTCTATACGT CCTATATGAG CGCGGCCGCG
CGACCCGCGG ACTAA
|
|---|
| Protein sequence | MASTNEQTSS PLAVVTGGAS GIGEASVRGF VSAGWRVVIA DINDERGKAI AAELGAAVSY
RHLDVSDEQA VTQFKEAVYA EHGLVSALVN SGGILQNATR VTKMPVEEFD RIIDVNLRGT
MLTARAFGEQ MAQSGGGSIV NLCSLTTFQP WPQPAYAMSK SALKMLTEIM AAELGPQGVR
VNAVAPGYTM TEAMKSRIDR GERDPSVVIS RSALRRFVEP REVADAIFFL CSPSASAITG
ITIPIDAGWL VYTSYMSAAA RPAD
|
|---|
| |