Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3311 |
Symbol | |
ID | 4112143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 3507811 |
End bp | 3509577 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638032443 |
Product | short chain dehydrogenase |
Protein accession | YP_640474 |
Protein GI | 108800277 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.768628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGAC CCGCCCCCCG ATTCGTCGAC AGCACCGACG GAGTGCGCGT TGCGGTGTAC GAAGAGGGCA ACCCCGACGG GCCCACGGTG ATCCTCGTGC ACGGCTGGCC GGATTCCCAT GTGGTGTGGG ACAGCGTCGC GGCCGAACTC GCCGACCGCT TCCACGTCGT GCGCTACGAC AACCGCGGCG TCAGCCCCAC CTCGGCGCCG AAACGCGCCG CGGCGTACAC CACCGCGCGC TACGCCGACG ACTTCGCCGC CGTCGCCGAC GCGGTGGCGC CGGGCCGGCG GGTGCACGTG GTGGCGCACG ACTGGGGTTC GACGGGCATG TGGGAGTACC TGTCCCGGCC CGAGGCCGCC GACCGGGTGG CCTCCTACAC CTCGCTGTCC GGGCCGAGCG TCGACCATGT GTACCGCTAC GTGCTCGACG GGCTCAAACG GCCGTACCGG ATCCGTCGCC TGGCTCGCGC GCTGAACCAG TTCGCCCGGC TGAGCTACAT GATCCTGCTG TCGGTTCCTC TGGTGGCCCC GGTGTTGGTG CGCGCCTTCA TCGCCGAGGG TCTGCGGAAG TACCAGAGGG TCGCCGAAGG CATCCCGGCC GATCGGCTGC TGCACTCCGA CACCTACCGG GCCGATGCCG CGCGAAGCGT GAAAGTCTAC CGCGCCAACT ACTTTCGGTC ATTGCTGACC AAGCGCACCC CCCGCGTCGT GGACGTCCCC GTACAGCTGA TCGTCAACAC CGGCGACGCG TTCATCCGGC CCTACGTCTA CGACGAGATC GCGCCGTGGG TGCCGACTCT GTGGCGCCGT GAGCTGCGCG CGGGCCACTG GTCGCCGATG TCGCATCCGC ATGTGATCGC AAGGGCGGTG GCCGAACTCG TCGAACACGT CGACGGCGCT CCGGCCGCCC GGGAGCTGCG CCGGGCGCGG GTCGGCGGGC CGCGCGAATA CTTCTCGGAC ACACTGGTTT CGGTGACCGG TGCGGGCAGC GGCATCGGCC GTGAGACCGC GCTGGCGTTC GCACGCGAAG GCGCCGAACT GGTGGTCAGC GATATCGACG AGGCCAGTGC CAAGGAGACC GCGGCCGCGA TCGAAGCCGC CGGCGGCGTC GCGCACGCCT ACCGGCTCGA CGTGGCCGAC GCCGATGCGG TCGAGCGGTT CGCCGACGAG GTCTGCGCCG GCCACGGTAT CCCCGACATC GTCGTCAACA ACGCCGGCGT GGGACAGGCC GGCCGCTTCC TCGACACACC GCGCGACCAG TGGGATCACG TACTCGACGT CAACCTCGGC GGGGTGGTCA ACGGCTGCCG CGCGTTCGCG CGCAGGCTCG TCGAGCGCGG CACCGGTGGG CACATCGTCA ACGTCGCCTC GATGGCCTCG TATGCCCCGC TGCAGTCGCT GAACGCGTAC TGCACCAGCA AGGCCGCGGT GTACATGTTC TCCGATTGTC TGCGCGCCGA ACTCGACGAG GCGGGGATCG GGCTGACCAC GATCTGCCCG AGCACCGTCG ACACCAACAT CGTGCGCAAC ACCCGCATCC ACGCCCCGGC CGACCGCACG GGCGACGTCG CGGGCCGGCG CGGCCAACTG CAGAAGATGT TCGCGATGCG CCGCTACGGA CCGGACAAGG CGGCCAAGGC GATCGTCGCC GCGGTCAAGG CGAACAAGGC GATCCGGCCG GTGATGCCGG AGGCCTACTT CGTCTACGGG GTGTCCCGGG TGTTGCCGCA GGCGCTGCGC AGCACCGCCC GCGGCCGCGT GCTCTAG
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Protein sequence | MSRPAPRFVD STDGVRVAVY EEGNPDGPTV ILVHGWPDSH VVWDSVAAEL ADRFHVVRYD NRGVSPTSAP KRAAAYTTAR YADDFAAVAD AVAPGRRVHV VAHDWGSTGM WEYLSRPEAA DRVASYTSLS GPSVDHVYRY VLDGLKRPYR IRRLARALNQ FARLSYMILL SVPLVAPVLV RAFIAEGLRK YQRVAEGIPA DRLLHSDTYR ADAARSVKVY RANYFRSLLT KRTPRVVDVP VQLIVNTGDA FIRPYVYDEI APWVPTLWRR ELRAGHWSPM SHPHVIARAV AELVEHVDGA PAARELRRAR VGGPREYFSD TLVSVTGAGS GIGRETALAF AREGAELVVS DIDEASAKET AAAIEAAGGV AHAYRLDVAD ADAVERFADE VCAGHGIPDI VVNNAGVGQA GRFLDTPRDQ WDHVLDVNLG GVVNGCRAFA RRLVERGTGG HIVNVASMAS YAPLQSLNAY CTSKAAVYMF SDCLRAELDE AGIGLTTICP STVDTNIVRN TRIHAPADRT GDVAGRRGQL QKMFAMRRYG PDKAAKAIVA AVKANKAIRP VMPEAYFVYG VSRVLPQALR STARGRVL
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