| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1359 |
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| Symbol | |
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| ID | 8019004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1440118 |
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| End bp | 1441926 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830139 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002981320 |
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| Protein GI | 241662960 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC TTCTTGAAGA GGCCCCGCTG GCGTTGTTCG AATCGCCCGC AGCGGTTTCG
CCCAACGACT ATTCGGAGCG GACGGTGCAG TCGGGCAGCG TCTCGCTCGC CGTCAAGACG
TGGGGCAACC CGGCGCATCC GACCGTCGTG CTGGTGCATG GCTATCCCGA CAACAGCGAG
GTCTGGCACG AGATGGCACC GCTGCTCGCG CGCGACTACT ACGTCGTTGC CTACGACGTG
CGGGGCGCAG GCCGGTCCAG TTCGCCCAGC GGGATGCGCA ATTACACCTT TGCGCGGTTG
ACCGATGACT TCATCGCCGT GATCGATGCG CTGAGCCCCG GCAAGCCCGT GCACCTGATC
GCGCACGATT GGGGTTCGAT CCAATCGTGG GAATTCGTGA CGGAGGAGCG CCTGCGCGGG
CGCATTGCGT CATACACGTC GTGCTCGGGG CCGTGCCTGG ACCACGTCGG GCACTGGATG
CGCGCGCGGC TGCTGCGGCC GACGCCGTCG TCGCTGGGCA AGATGCTGGG GCAGCTCGTG
CGCTCGTGGT ACGTGCTGCT GTTTCATTTG CCGATCGTGC CGGAGCTGAG TTGGCGCCTG
TGGCTCGGGC GCGCGTGGCC GCGTGTGCTG CGTCGTGTGG AAAAGACCGC CATCGTGCCG
CGTCCGACCC AGACGGCTGA TGGCGTGCGT GGTGTCTCGC TGTATCGCGC CAACTTCATC
CGCAGTCTGT TCACGCCGCG CAAGCGGGTC GCACATGCGC CGGTGCAGGT GATCGTGCCA
ACGCTGGATA AGTACGTCAG CCCAGCATTG TCAGAGGACC TTTCGCGCTG GGTACCGCAG
TATTGGCGCC GCGAAGTGGT GGCACGGCAT TGGTTGCCGG TCACGCATGC CGCACGCATG
GCGGAAATGG CTTGCGAGCT GATCGAGCAT GCCGAGGGCA AGCCGGAATC CGAAGCGCTG
CAACGCGCGC GTCCGCAAGG CGAGCGCAAA CCGCTGTCCG GCAAGCTCGC CGTCATCACG
GGCGCTGGCG GCGGCATCGG TCGTTGCGCG GCGCTGGAAT TCGCGGAGCA AGGCGCAGCC
ATCGTCGCCG TCGACATCCG TGCCGAAGAT GCAGAGCGCA CGGCCAAGCT CATCCGCCTC
ACGGGTGGCA AGGCGTGGGC GCATACCGTG GACGTCGGTA ACGCCGAGCA GATGGAAGCG
CTGGTCGATT GGGTCGGCAA GGACCTGGGC GGCGCCGACA TCGTCGTCAA TAACGCCGGC
ATTGGCATGG CGGGCGGCAT TGTCGACACG TCCGAGCGCG ATTGGCAACG CATCCTGCAC
GTGAATGTGT GGGGCGTGAT CCATGGCGCC CGGCTGTTCG CCAAGCAGAT GGTGGCGCGC
GGGCAGGGCG GTCACATCCT GAACACGGCA TCGGCGGCGG CCTTTGCGCC GTCGCGTGAT
CTTGCCGCCT ATGCGACGAC AAAGGCCGCG GTGCTGATGC TGTCCGAATG CATGCGCGGC
GAGCTGGCCG GGCAGGGTAT TGGCGTGTCG GCCATCTGCC CCGGTTTTGC GGAGACCGGA
ATCATGGCCT CCACGGTCTA CAGCGGCACG ACCGAGGCAC AGCAAGCCCA ATTGCGCGCC
CGCGCCACCA AGCTCTACCA ACTGCGTGGC CTCAAGCCAG AGACCGTCGC AAAAGCCATG
TTCAGCGCGG TTCAACACAA CAAGCCCGTG GTCACGATCG GCATCGAGGC GCATTCGTCC
CGCTTCATCT CGCGCTATGC GCAATGGCTG AGCCGGCTGA TCGCGCGCGT GAGCATGGCC
GGGCATTGA
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| Protein sequence | MKTLLEEAPL ALFESPAAVS PNDYSERTVQ SGSVSLAVKT WGNPAHPTVV LVHGYPDNSE
VWHEMAPLLA RDYYVVAYDV RGAGRSSSPS GMRNYTFARL TDDFIAVIDA LSPGKPVHLI
AHDWGSIQSW EFVTEERLRG RIASYTSCSG PCLDHVGHWM RARLLRPTPS SLGKMLGQLV
RSWYVLLFHL PIVPELSWRL WLGRAWPRVL RRVEKTAIVP RPTQTADGVR GVSLYRANFI
RSLFTPRKRV AHAPVQVIVP TLDKYVSPAL SEDLSRWVPQ YWRREVVARH WLPVTHAARM
AEMACELIEH AEGKPESEAL QRARPQGERK PLSGKLAVIT GAGGGIGRCA ALEFAEQGAA
IVAVDIRAED AERTAKLIRL TGGKAWAHTV DVGNAEQMEA LVDWVGKDLG GADIVVNNAG
IGMAGGIVDT SERDWQRILH VNVWGVIHGA RLFAKQMVAR GQGGHILNTA SAAAFAPSRD
LAAYATTKAA VLMLSECMRG ELAGQGIGVS AICPGFAETG IMASTVYSGT TEAQQAQLRA
RATKLYQLRG LKPETVAKAM FSAVQHNKPV VTIGIEAHSS RFISRYAQWL SRLIARVSMA
GH
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