| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0303 |
|---|
| Symbol | |
|---|
| ID | 4109149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 340767 |
|---|
| End bp | 341555 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638029428 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_637480 |
|---|
| Protein GI | 108797283 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATCA CCGACAGGGT GTTCGTCGTG ACCGGTGCCG GTAACGGTAT GGGCCGGCAG
GTGACGCTCG ACCTCCTGCG CCGGGGTGCG CTGGTCGCGG CGGCCGACGT CGACGAAGTG
GGACTGACCG GCACGGCACG GCTCGCGATG GCCGGGACCC GGCTGTCCAC CCACGTTCTC
GACGTCACGG ACAGGGACGC GGTCGCCGCC ATGCCGGGCC GGGTGGTCGA CGTCCACGGC
CGGGTCGACG GGCTGGTCAA CATCGCCGGC GTCATCCACC GGTTCGCGCC GTTCATCGAC
CTGCCCCCGG AGACGGCCGA TCGCATCATG GCCGTCAACT TCACCGGCAC GGTCGACATG
TGCCGCGCGT TCCTGCCCGT CCTCCTGGCC CGCCCGGAGG CGAACCTGAC GAACATGTCG
AGCCTGTCGG CGTTGCTGCC CTTCGCCAGC CAGACGCTGT ACAGCGCCAG CAAGGGCGCG
GTCAAACAGT TCAGCGAAGG CCTCTACGCC GAGCTGTGCG ATACGAATGT CCATGTGGTG
ACGGTCTTTC CGGGCAACGT CGCCACGGAG CTGACCAGTA ACTCGGGTGT CGAGATGCTC
GACGCCGGCG GTAAGAAGGT CCGGTCCACC ACGCCGGAGG CGGCGGGCCG CAAGATCGTC
GACGGCATCG CCGAGGACCG TTTCCGGGTA CTCATCGGTG CCGACGCACA CAGCCTCGAC
GTGCTGGCGC GGGTGTCGGC GAAACGCACC ACCAGGTTGG TCGCCAAACA GATCAAGTCG
GTGCTGTGA
|
|---|
| Protein sequence | MRITDRVFVV TGAGNGMGRQ VTLDLLRRGA LVAAADVDEV GLTGTARLAM AGTRLSTHVL
DVTDRDAVAA MPGRVVDVHG RVDGLVNIAG VIHRFAPFID LPPETADRIM AVNFTGTVDM
CRAFLPVLLA RPEANLTNMS SLSALLPFAS QTLYSASKGA VKQFSEGLYA ELCDTNVHVV
TVFPGNVATE LTSNSGVEML DAGGKKVRST TPEAAGRKIV DGIAEDRFRV LIGADAHSLD
VLARVSAKRT TRLVAKQIKS VL
|
|---|
| |