Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3168 |
Symbol | |
ID | 7269917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3846037 |
End bp | 3846846 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643567989 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002464462 |
Protein GI | 219850029 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.685444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTCA ACAACAAAGT TATTGTTGTT AGCGGTGGTG GTAGCGGTAT CGGTCGAGCA CTTGTTTTAC ACCTCCTGAC CAAGGGAGCG CGCGTCGCCG CAGTTGATCT GAACCCGACT ACCTTGCAGG AGACGGCACA AATGGCCGGT TCATCGGCGA ATCGGCTGTC TATCCACAGG GTCGATATTA CCGATCGGGC AGCGGTAGCG GCCCTGCCCG ATCAGGTTAT CGCGGCTCAC GGGGTCGTTG ATGGTTTGAT CAACAACGCC GGCATCATCC AGCCGTTTCT AGGGGTGCCT GATCTTGATG AAGCCACCAT CGAACGGGTG ATGAAGGTCA ATTTCTACGG CACTGTATGG ATGACCAAAG CCTTTTTGCC CTATCTCCTC TCGCGACCTG AAGCGCATAT CGTTAACGTT TCGAGCATGG GTGGCTTTTT ACCGGTACCG GGACAGACGA TCTATGGTGC GGCGAAGGCG GCGGTGAAGC TGTTTACCGA AGGTCTCTAT GCAGAATTGC TCGAAACAAA CGTGCGTGTC ACGGTTGTCT TTCCCGGCGC GGTACGTACC AATATCGTTG CCAATTCGGG CGTGAATCGG TTACCGACGG GGACGACCGA TAACCGGCGT GCGCCGACGG CACTTGCCCC AGAGCGCGCG GCTCAGATAA TTGTTGATGG TATCGAACGC AACCGGTATC GGGTGTTAGT CGGGAGTGAT GCGCGGTTGA TGGATCTCCT CTCGCGCCTT AATCCGCAAT TTGCGGCGCG CTTTATCTTT CGCCAGATGA AGAGTTTATT GCAGCAATAG
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Protein sequence | MLVNNKVIVV SGGGSGIGRA LVLHLLTKGA RVAAVDLNPT TLQETAQMAG SSANRLSIHR VDITDRAAVA ALPDQVIAAH GVVDGLINNA GIIQPFLGVP DLDEATIERV MKVNFYGTVW MTKAFLPYLL SRPEAHIVNV SSMGGFLPVP GQTIYGAAKA AVKLFTEGLY AELLETNVRV TVVFPGAVRT NIVANSGVNR LPTGTTDNRR APTALAPERA AQIIVDGIER NRYRVLVGSD ARLMDLLSRL NPQFAARFIF RQMKSLLQQ
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