Gene Cagg_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3168 
Symbol 
ID7269917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3846037 
End bp3846846 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content55% 
IMG OID643567989 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002464462 
Protein GI219850029 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.685444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCA ACAACAAAGT TATTGTTGTT AGCGGTGGTG GTAGCGGTAT CGGTCGAGCA 
CTTGTTTTAC ACCTCCTGAC CAAGGGAGCG CGCGTCGCCG CAGTTGATCT GAACCCGACT
ACCTTGCAGG AGACGGCACA AATGGCCGGT TCATCGGCGA ATCGGCTGTC TATCCACAGG
GTCGATATTA CCGATCGGGC AGCGGTAGCG GCCCTGCCCG ATCAGGTTAT CGCGGCTCAC
GGGGTCGTTG ATGGTTTGAT CAACAACGCC GGCATCATCC AGCCGTTTCT AGGGGTGCCT
GATCTTGATG AAGCCACCAT CGAACGGGTG ATGAAGGTCA ATTTCTACGG CACTGTATGG
ATGACCAAAG CCTTTTTGCC CTATCTCCTC TCGCGACCTG AAGCGCATAT CGTTAACGTT
TCGAGCATGG GTGGCTTTTT ACCGGTACCG GGACAGACGA TCTATGGTGC GGCGAAGGCG
GCGGTGAAGC TGTTTACCGA AGGTCTCTAT GCAGAATTGC TCGAAACAAA CGTGCGTGTC
ACGGTTGTCT TTCCCGGCGC GGTACGTACC AATATCGTTG CCAATTCGGG CGTGAATCGG
TTACCGACGG GGACGACCGA TAACCGGCGT GCGCCGACGG CACTTGCCCC AGAGCGCGCG
GCTCAGATAA TTGTTGATGG TATCGAACGC AACCGGTATC GGGTGTTAGT CGGGAGTGAT
GCGCGGTTGA TGGATCTCCT CTCGCGCCTT AATCCGCAAT TTGCGGCGCG CTTTATCTTT
CGCCAGATGA AGAGTTTATT GCAGCAATAG
 
Protein sequence
MLVNNKVIVV SGGGSGIGRA LVLHLLTKGA RVAAVDLNPT TLQETAQMAG SSANRLSIHR 
VDITDRAAVA ALPDQVIAAH GVVDGLINNA GIIQPFLGVP DLDEATIERV MKVNFYGTVW
MTKAFLPYLL SRPEAHIVNV SSMGGFLPVP GQTIYGAAKA AVKLFTEGLY AELLETNVRV
TVVFPGAVRT NIVANSGVNR LPTGTTDNRR APTALAPERA AQIIVDGIER NRYRVLVGSD
ARLMDLLSRL NPQFAARFIF RQMKSLLQQ