More than 300 homologs were found in PanDaTox collection
for query gene Fjoh_2936 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_2936  putative PAS/PAC sensor protein  100 
 
 
201 aa  409  1e-113  Flavobacterium johnsoniae UW101  Bacteria  normal  0.178135  n/a   
 
 
-
 
NC_009441  Fjoh_2525  putative PAS/PAC sensor protein  53.96 
 
 
208 aa  229  3e-59  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0659487  n/a   
 
 
-
 
NC_013162  Coch_1378  putative PAS/PAC sensor protein  48.57 
 
 
200 aa  189  2e-47  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1964  putative PAS/PAC sensor protein  50.88 
 
 
229 aa  184  8e-46  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.705516  n/a   
 
 
-
 
NC_013162  Coch_1522  PAS sensor protein  48.28 
 
 
225 aa  181  8.000000000000001e-45  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.533099  n/a   
 
 
-
 
NC_013162  Coch_1521  putative PAS/PAC sensor protein  42.93 
 
 
228 aa  174  9.999999999999999e-43  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.950455  n/a   
 
 
-
 
NC_009714  CHAB381_1223  signal-transduction sensor protein  45.03 
 
 
189 aa  168  6e-41  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.658782  n/a   
 
 
-
 
NC_013512  Sdel_0158  PAS sensor protein  41.76 
 
 
170 aa  145  5e-34  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00559927  n/a   
 
 
-
 
NC_009715  CCV52592_1962  methyl-accepting chemotaxis protein  44.74 
 
 
166 aa  142  3e-33  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4977  putative PAS/PAC sensor protein  39.16 
 
 
177 aa  136  2e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.13761  n/a   
 
 
-
 
NC_009802  CCC13826_1233  methyl-accepting chemotaxis protein  41.45 
 
 
166 aa  135  5e-31  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1393  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
182 aa  134  8e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.959449 
 
 
-
 
NC_011004  Rpal_4683  putative PAS/PAC sensor protein  39.52 
 
 
173 aa  132  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4975  putative PAS/PAC sensor protein  37.58 
 
 
178 aa  131  6.999999999999999e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.161434  n/a   
 
 
-
 
NC_007925  RPC_4662  putative PAS/PAC sensor protein  37.72 
 
 
168 aa  131  6.999999999999999e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.193201 
 
 
-
 
NC_007778  RPB_1413  putative PAS/PAC sensor protein  36.9 
 
 
185 aa  130  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.026067  normal 
 
 
-
 
NC_007778  RPB_1071  putative PAS/PAC sensor protein  36.69 
 
 
178 aa  129  3e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0368  PAS sensor protein  41.4 
 
 
168 aa  126  2.0000000000000002e-28  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.580475  n/a   
 
 
-
 
NC_007643  Rru_A3464  transcriptional regulator  37.29 
 
 
174 aa  124  8.000000000000001e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1206  methyl-accepting chemotaxis protein  40.74 
 
 
164 aa  124  9e-28  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0540  methyl-accepting chemotaxis protein  40 
 
 
166 aa  122  3e-27  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2378  transcriptional regulator  37.85 
 
 
174 aa  122  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1325  methyl-accepting chemotaxis protein  39.75 
 
 
164 aa  122  4e-27  Campylobacter jejuni RM1221  Bacteria  normal  0.0735034  n/a   
 
 
-
 
NC_003912  CJE1323  methyl-accepting chemotaxis protein  38.99 
 
 
165 aa  122  5e-27  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1204  methyl-accepting chemotaxis protein  38.99 
 
 
165 aa  122  5e-27  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0044  putative PAS/PAC sensor protein  38.82 
 
 
162 aa  121  7e-27  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1012  methyl-accepting chemotaxis protein  36.65 
 
 
171 aa  121  9e-27  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.63093  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0920  putative PAS/PAC sensor protein  42.77 
 
 
170 aa  120  1.9999999999999998e-26  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_4009  PAS  37.14 
 
 
172 aa  119  1.9999999999999998e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_0964  putative PAS domain signal transduction sensor protein  39.87 
 
 
163 aa  116  1.9999999999999998e-25  Campylobacter lari RM2100  Bacteria  normal  0.695373  n/a   
 
 
-
 
NC_012039  Cla_0963  putative PAS domain signal transduction sensor protein  38 
 
 
163 aa  114  8.999999999999998e-25  Campylobacter lari RM2100  Bacteria  normal  0.598174  n/a   
 
 
-
 
NC_013521  Sked_05500  PAS domain S-box  34.3 
 
 
194 aa  112  5e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.414164  normal 
 
 
-
 
NC_011004  Rpal_4792  putative PAS/PAC sensor protein  34.48 
 
 
174 aa  110  1.0000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1312  putative PAS/PAC sensor protein  33.53 
 
 
174 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.723682  normal  0.171791 
 
 
-
 
NC_009664  Krad_3403  PAS sensor protein  34.13 
 
 
189 aa  109  3e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.263742  normal  0.531721 
 
 
-
 
NC_013174  Jden_2233  putative PAS/PAC sensor protein  36.54 
 
 
177 aa  108  4.0000000000000004e-23  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.17522 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.48 
 
 
514 aa  107  2e-22  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3908  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
174 aa  106  2e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
532 aa  105  4e-22  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0659  putative PAS/PAC sensor protein  39.19 
 
 
164 aa  105  4e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0725  putative methyl-accepting chemotaxis sensory transducer  31.87 
 
 
495 aa  104  1e-21  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.32 
 
 
954 aa  103  1e-21  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2812  putative PAS/PAC sensor protein  38.64 
 
 
166 aa  103  2e-21  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.494423  decreased coverage  0.000000324615 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
515 aa  102  4e-21  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.13 
 
 
524 aa  102  4e-21  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  40.77 
 
 
521 aa  102  4e-21  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.44 
 
 
522 aa  101  6e-21  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.44 
 
 
522 aa  101  7e-21  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.52 
 
 
550 aa  100  1e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  42.31 
 
 
557 aa  100  1e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.71 
 
 
522 aa  100  1e-20  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.86 
 
 
516 aa  99.8  2e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_007298  Daro_0223  PAS  39.29 
 
 
1214 aa  100  2e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.76 
 
 
1170 aa  99.8  2e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
522 aa  100  2e-20  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.33 
 
 
566 aa  99.8  3e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  38.97 
 
 
517 aa  99.4  3e-20  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  38.17 
 
 
518 aa  99.4  3e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.64 
 
 
514 aa  99.4  3e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1684  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.46 
 
 
525 aa  99  5e-20  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
522 aa  98.6  6e-20  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  40.68 
 
 
521 aa  98.2  6e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.69 
 
 
522 aa  98.6  6e-20  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_007005  Psyr_3735  PAS  40.68 
 
 
521 aa  98.2  8e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_012917  PC1_2292  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.69 
 
 
517 aa  97.8  9e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.58 
 
 
566 aa  97.8  9e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  39.26 
 
 
520 aa  97.4  1e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013422  Hneap_1291  PAS sensor protein  36.23 
 
 
184 aa  97.4  1e-19  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.13 
 
 
716 aa  97.4  1e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  41.3 
 
 
538 aa  97.4  1e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.69 
 
 
521 aa  97.8  1e-19  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  42.06 
 
 
529 aa  96.7  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_007298  Daro_0729  PAS  42.72 
 
 
945 aa  96.7  2e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.74 
 
 
888 aa  96.7  2e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
522 aa  97.1  2e-19  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  37.23 
 
 
533 aa  96.7  2e-19  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  39.17 
 
 
565 aa  96.7  2e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
522 aa  97.1  2e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  37.69 
 
 
583 aa  95.9  3e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.31 
 
 
561 aa  96.3  3e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  40.5 
 
 
521 aa  95.5  4e-19  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  40.77 
 
 
516 aa  95.5  4e-19  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
534 aa  95.5  5e-19  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1924  multi-sensor hybrid histidine kinase  37.5 
 
 
901 aa  95.5  5e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  36.92 
 
 
523 aa  95.1  6e-19  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.53 
 
 
598 aa  95.1  6e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
419 aa  94.7  7e-19  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.92 
 
 
521 aa  94.7  7e-19  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.44 
 
 
524 aa  94.7  7e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  39.5 
 
 
521 aa  94.7  8e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_007484  Noc_1487  PAS domain-containing protein  37.4 
 
 
158 aa  94.7  8e-19  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.0000133262  n/a   
 
 
-
 
NC_009436  Ent638_3527  methyl-accepting chemotaxis sensory transducer  40.65 
 
 
506 aa  94.7  8e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.538358 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
532 aa  94.4  9e-19  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  36.92 
 
 
669 aa  94.4  1e-18  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  36.64 
 
 
521 aa  94  1e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  36.92 
 
 
623 aa  94.4  1e-18  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2593  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.53 
 
 
517 aa  94.4  1e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.64 
 
 
522 aa  94.4  1e-18  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
CP001637  EcDH1_0629  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.37 
 
 
506 aa  93.6  2e-18  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
524 aa  93.2  2e-18  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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